RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 SLFN13Q68D06 897 aa20.61■□□□□ 0.89
CLIP2-201ENST00000223398 HAUS7Q99871 368 aa20.61■□□□□ 0.89
CLIP2-201ENST00000223398 IGSF1Q8N6C5 1336 aa20.61■□□□□ 0.89
CLIP2-201ENST00000223398 SAMD9LQ8IVG5 1584 aa20.61■□□□□ 0.89
CLIP2-201ENST00000223398 CCDC25Q86WR0 208 aa20.61■□□□□ 0.89
CLIP2-201ENST00000223398 NACA2Q9H009 215 aa20.61■□□□□ 0.89
CLIP2-201ENST00000223398 GPR101Q96P66 508 aaPredicted RBP20.61■□□□□ 0.89
CLIP2-201ENST00000223398 SMIM23A6NLE4 172 aa20.61■□□□□ 0.89
CLIP2-201ENST00000223398 ARHGEF5Q12774 1597 aa20.61■□□□□ 0.89
CLIP2-201ENST00000223398 UTP14CQ5TAP6 766 aaKnown RBP20.6■□□□□ 0.89
CLIP2-201ENST00000223398 TLR7Q9NYK1 1049 aaKnown RBP20.6■□□□□ 0.89
CLIP2-201ENST00000223398 THRAP3Q9Y2W1 955 aaKnown RBP20.6■□□□□ 0.89
CLIP2-201ENST00000223398 FGAP02671 866 aa20.6■□□□□ 0.89
CLIP2-201ENST00000223398 HSPA4P34932 840 aa20.6■□□□□ 0.89
CLIP2-201ENST00000223398 FAM102BQ5T8I3 360 aa20.6■□□□□ 0.89
CLIP2-201ENST00000223398 AGTPBP1Q9UPW5 1226 aa20.6■□□□□ 0.89
CLIP2-201ENST00000223398 ADGBQ8N7X0 1667 aa20.6■□□□□ 0.89
CLIP2-201ENST00000223398 ATP2A1O14983 1001 aa20.6■□□□□ 0.89
CLIP2-201ENST00000223398 POLR2MP0CAP2 368 aa20.6■□□□□ 0.89
CLIP2-201ENST00000223398 CD19P15391 556 aa20.6■□□□□ 0.89
CLIP2-201ENST00000223398 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.6■□□□□ 0.89
CLIP2-201ENST00000223398 V9GYY5 206 aaPredicted RBP20.6■□□□□ 0.89
CLIP2-201ENST00000223398 PPP1R7Q15435 360 aa20.6■□□□□ 0.89
CLIP2-201ENST00000223398 FBXO11Q86XK2 927 aa20.6■□□□□ 0.89
CLIP2-201ENST00000223398 ARAP3Q8WWN8 1544 aa20.6■□□□□ 0.89
CLIP2-201ENST00000223398 GDF11O95390 407 aa20.59■□□□□ 0.89
CLIP2-201ENST00000223398 DYNLL1P63167 89 aaKnown RBP20.59■□□□□ 0.89
CLIP2-201ENST00000223398 LEMD3Q9Y2U8 911 aa20.59■□□□□ 0.89
CLIP2-201ENST00000223398 PAXBP1Q9Y5B6 917 aa20.59■□□□□ 0.89
CLIP2-201ENST00000223398 SYNRGQ9UMZ2 1314 aa20.59■□□□□ 0.89
CLIP2-201ENST00000223398 TARBP1Q13395 1621 aaKnown RBP20.59■□□□□ 0.89
CLIP2-201ENST00000223398 SPOPO43791 374 aa20.59■□□□□ 0.89
CLIP2-201ENST00000223398 ADD1P35611 737 aaKnown RBP20.59■□□□□ 0.89
CLIP2-201ENST00000223398 PAK1Q13153 545 aa20.59■□□□□ 0.89
CLIP2-201ENST00000223398 PABPC4Q13310 644 aaKnown RBP eCLIP20.59■□□□□ 0.89
CLIP2-201ENST00000223398 ATP8A2Q9NTI2 1148 aa20.59■□□□□ 0.89
CLIP2-201ENST00000223398 SERPINA10Q9UK55 444 aa20.59■□□□□ 0.89
CLIP2-201ENST00000223398 MMP10P09238 476 aa20.59■□□□□ 0.89
CLIP2-201ENST00000223398 GOLGA1Q92805 767 aa20.59■□□□□ 0.89
CLIP2-201ENST00000223398 RASA3Q14644 834 aa20.59■□□□□ 0.89
CLIP2-201ENST00000223398 NOLC1Q14978 699 aaKnown RBP eCLIP20.59■□□□□ 0.89
CLIP2-201ENST00000223398 INF2Q27J81 1249 aa20.59■□□□□ 0.89
CLIP2-201ENST00000223398 IGSF22Q8N9C0 903 aa20.59■□□□□ 0.89
CLIP2-201ENST00000223398 CCPG1Q9ULG6 757 aa20.59■□□□□ 0.89
CLIP2-201ENST00000223398 ZNF202O95125 648 aa20.59■□□□□ 0.89
CLIP2-201ENST00000223398 CCDC122Q5T0U0 273 aa20.59■□□□□ 0.89
CLIP2-201ENST00000223398 AFF2P51816 1311 aa20.58■□□□□ 0.89
CLIP2-201ENST00000223398 MYCP01106 439 aaPredicted RBP20.58■□□□□ 0.89
CLIP2-201ENST00000223398 SUGCTQ9HAC7 445 aa20.58■□□□□ 0.89
CLIP2-201ENST00000223398 MRPL11Q9Y3B7 192 aaKnown RBP20.58■□□□□ 0.89
CLIP2-201ENST00000223398 AKR1B15C9JRZ8 316 aaPredicted RBP20.58■□□□□ 0.89
CLIP2-201ENST00000223398 TECP42680 631 aa20.58■□□□□ 0.89
CLIP2-201ENST00000223398 IGBP1P78318 339 aa20.58■□□□□ 0.89
CLIP2-201ENST00000223398 ME3Q16798 604 aa20.58■□□□□ 0.89
CLIP2-201ENST00000223398 DEPTORQ8TB45 409 aa20.58■□□□□ 0.89
CLIP2-201ENST00000223398 IFT81Q8WYA0 676 aa20.58■□□□□ 0.89
CLIP2-201ENST00000223398 DDX12PQ92771 950 aa20.58■□□□□ 0.89
CLIP2-201ENST00000223398 ANO3Q9BYT9 981 aa20.58■□□□□ 0.89
CLIP2-201ENST00000223398 POLA2Q14181 598 aa20.58■□□□□ 0.88
CLIP2-201ENST00000223398 PLEKHF1Q96S99 279 aa20.58■□□□□ 0.88
CLIP2-201ENST00000223398 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.58■□□□□ 0.88
CLIP2-201ENST00000223398 TTC37Q6PGP7 1564 aa20.58■□□□□ 0.88
CLIP2-201ENST00000223398 PPP1R2P41236 205 aa20.58■□□□□ 0.88
CLIP2-201ENST00000223398 FANCBQ8NB91 859 aa20.58■□□□□ 0.88
CLIP2-201ENST00000223398 DALRD3Q5D0E6 543 aaKnown RBP20.57■□□□□ 0.88
CLIP2-201ENST00000223398 CNGA4Q8IV77 575 aa20.57■□□□□ 0.88
CLIP2-201ENST00000223398 PALLDQ8WX93 1383 aa20.57■□□□□ 0.88
CLIP2-201ENST00000223398 ERVK-7P63135 1459 aa20.57■□□□□ 0.88
CLIP2-201ENST00000223398 UBXN2AP68543 259 aa20.57■□□□□ 0.88
CLIP2-201ENST00000223398 CCDC77Q9BR77 488 aa20.57■□□□□ 0.88
CLIP2-201ENST00000223398 STK24Q9Y6E0 443 aa20.57■□□□□ 0.88
CLIP2-201ENST00000223398 DAPK3O43293 454 aa20.57■□□□□ 0.88
CLIP2-201ENST00000223398 LRMPQ12912 555 aa20.57■□□□□ 0.88
CLIP2-201ENST00000223398 OTUD6AQ7L8S5 288 aa20.57■□□□□ 0.88
CLIP2-201ENST00000223398 BLIDQ8IZY5 108 aa20.57■□□□□ 0.88
CLIP2-201ENST00000223398 NDC80O14777 642 aa20.57■□□□□ 0.88
CLIP2-201ENST00000223398 TNNI1P19237 187 aa20.57■□□□□ 0.88
CLIP2-201ENST00000223398 RNASE9P60153 205 aaKnown RBP20.57■□□□□ 0.88
CLIP2-201ENST00000223398 PALD1Q9ULE6 856 aa20.57■□□□□ 0.88
CLIP2-201ENST00000223398 ATP2C2O75185 946 aa20.56■□□□□ 0.88
CLIP2-201ENST00000223398 BBOX1O75936 387 aa20.56■□□□□ 0.88
CLIP2-201ENST00000223398 RFX1P22670 979 aa20.56■□□□□ 0.88
CLIP2-201ENST00000223398 NLRP10Q86W26 655 aa20.56■□□□□ 0.88
CLIP2-201ENST00000223398 PRDM10Q9NQV6 1147 aa20.56■□□□□ 0.88
CLIP2-201ENST00000223398 ABCA8O94911 1581 aa20.56■□□□□ 0.88
CLIP2-201ENST00000223398 GSPT1P15170 499 aaKnown RBP20.56■□□□□ 0.88
CLIP2-201ENST00000223398 SREK1Q8WXA9 508 aaKnown RBP20.56■□□□□ 0.88
CLIP2-201ENST00000223398 TAB2Q9NYJ8 693 aa20.56■□□□□ 0.88
CLIP2-201ENST00000223398 TXNDC16Q9P2K2 825 aa20.56■□□□□ 0.88
CLIP2-201ENST00000223398 DBNLQ9UJU6 430 aaKnown RBP20.56■□□□□ 0.88
CLIP2-201ENST00000223398 PRPF6O94906 941 aaKnown RBP20.56■□□□□ 0.88
CLIP2-201ENST00000223398 MCM6Q14566 821 aa20.56■□□□□ 0.88
CLIP2-201ENST00000223398 PI16Q6UXB8 463 aa20.56■□□□□ 0.88
CLIP2-201ENST00000223398 DPP9Q86TI2 863 aa20.56■□□□□ 0.88
CLIP2-201ENST00000223398 ASIC2Q16515 512 aa20.56■□□□□ 0.88
CLIP2-201ENST00000223398 LPXNO60711 386 aa20.56■□□□□ 0.88
CLIP2-201ENST00000223398 SEL1L2Q5TEA6 688 aa20.56■□□□□ 0.88
CLIP2-201ENST00000223398 FAM169AQ9Y6X4 670 aa20.56■□□□□ 0.88
CLIP2-201ENST00000223398 AATKQ6ZMQ8 1374 aa20.55■□□□□ 0.88
CLIP2-201ENST00000223398 XKR9Q5GH70 373 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms