RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 NEDD1Q8NHV4 660 aa23.42■■□□□ 1.34
HOXA6-201ENST00000222728 WDR18Q9BV38 432 aa23.42■■□□□ 1.34
HOXA6-201ENST00000222728 PLIN4Q96Q06 1357 aa23.41■■□□□ 1.34
HOXA6-201ENST00000222728 CCL15-CCL14A0A0B4J2E2 113 aa23.41■■□□□ 1.34
HOXA6-201ENST00000222728 E7EWF7 191 aa23.41■■□□□ 1.34
HOXA6-201ENST00000222728 NMT2O60551 498 aa23.41■■□□□ 1.34
HOXA6-201ENST00000222728 SEC24BO95487 1268 aa23.41■■□□□ 1.34
HOXA6-201ENST00000222728 PCP11498 1178 aaKnown RBP23.41■■□□□ 1.34
HOXA6-201ENST00000222728 MAP2K2P36507 400 aa23.41■■□□□ 1.34
HOXA6-201ENST00000222728 GTF2A2P52657 109 aa23.41■■□□□ 1.34
HOXA6-201ENST00000222728 MTMR2Q13614 643 aa23.41■■□□□ 1.34
HOXA6-201ENST00000222728 ZYXQ15942 572 aaKnown RBP23.41■■□□□ 1.34
HOXA6-201ENST00000222728 CCL15Q16663 113 aa23.41■■□□□ 1.34
HOXA6-201ENST00000222728 CEP95Q96GE4 821 aa23.41■■□□□ 1.34
HOXA6-201ENST00000222728 PCNTO95613 3336 aa23.41■■□□□ 1.34
HOXA6-201ENST00000222728 IGKV6D-41A0A0C4DH26 115 aa23.4■■□□□ 1.34
HOXA6-201ENST00000222728 MANSC4A6NHS7 340 aaPredicted RBP23.4■■□□□ 1.34
HOXA6-201ENST00000222728 CXCL11O14625 94 aa23.4■■□□□ 1.34
HOXA6-201ENST00000222728 KDM4AO75164 1064 aa23.4■■□□□ 1.34
HOXA6-201ENST00000222728 HMGCS2P54868 508 aa23.4■■□□□ 1.34
HOXA6-201ENST00000222728 SIAH1Q8IUQ4 282 aa23.4■■□□□ 1.34
HOXA6-201ENST00000222728 BRI3BPQ8WY22 251 aa23.4■■□□□ 1.34
HOXA6-201ENST00000222728 FEZ1Q99689 392 aa23.4■■□□□ 1.34
HOXA6-201ENST00000222728 TBC1D2Q9BYX2 928 aa23.4■■□□□ 1.34
HOXA6-201ENST00000222728 A0A1W2PRG0 241 aa23.39■■□□□ 1.33
HOXA6-201ENST00000222728 CETPP11597 493 aa23.39■■□□□ 1.33
HOXA6-201ENST00000222728 EEF2P13639 858 aaKnown RBP23.39■■□□□ 1.33
HOXA6-201ENST00000222728 GADL1Q6ZQY3 521 aa23.39■■□□□ 1.33
HOXA6-201ENST00000222728 ESR2Q92731 530 aa23.39■■□□□ 1.33
HOXA6-201ENST00000222728 USP26Q9BXU7 913 aa23.39■■□□□ 1.33
HOXA6-201ENST00000222728 KANSL2Q9H9L4 492 aa23.39■■□□□ 1.33
HOXA6-201ENST00000222728 IL17RBQ9NRM6 502 aa23.39■■□□□ 1.33
HOXA6-201ENST00000222728 A0A0G2JLL6 359 aaPredicted RBP23.38■■□□□ 1.33
HOXA6-201ENST00000222728 USP17L10C9JJH3 530 aa23.38■■□□□ 1.33
HOXA6-201ENST00000222728 BACE1P56817 501 aa23.38■■□□□ 1.33
HOXA6-201ENST00000222728 MOGSQ13724 837 aa23.38■■□□□ 1.33
HOXA6-201ENST00000222728 RNF20Q5VTR2 975 aa23.38■■□□□ 1.33
HOXA6-201ENST00000222728 PRRT2Q7Z6L0 340 aaPredicted RBP23.38■■□□□ 1.33
HOXA6-201ENST00000222728 RASEFQ8IZ41 740 aa23.38■■□□□ 1.33
HOXA6-201ENST00000222728 PTPN18Q99952 460 aa23.38■■□□□ 1.33
HOXA6-201ENST00000222728 ZKSCAN3Q9BRR0 538 aa23.38■■□□□ 1.33
HOXA6-201ENST00000222728 KRT23Q9C075 422 aa23.38■■□□□ 1.33
HOXA6-201ENST00000222728 CNNM2Q9H8M5 875 aa23.38■■□□□ 1.33
HOXA6-201ENST00000222728 ARHGEF10LQ9HCE6 1279 aa23.38■■□□□ 1.33
HOXA6-201ENST00000222728 PARP14Q460N5 1801 aa23.38■■□□□ 1.33
HOXA6-201ENST00000222728 IGF2BP3O00425 579 aaKnown RBP eCLIP23.37■■□□□ 1.33
HOXA6-201ENST00000222728 HSPA4P34932 840 aa23.37■■□□□ 1.33
HOXA6-201ENST00000222728 SREBF2Q12772 1141 aa23.37■■□□□ 1.33
HOXA6-201ENST00000222728 TRDNQ13061 729 aa23.37■■□□□ 1.33
HOXA6-201ENST00000222728 COL9A3Q14050 684 aaPredicted RBP23.37■■□□□ 1.33
HOXA6-201ENST00000222728 MTMR4Q9NYA4 1195 aa23.37■■□□□ 1.33
HOXA6-201ENST00000222728 ZSWIM5Q9P217 1185 aa23.37■■□□□ 1.33
HOXA6-201ENST00000222728 CLIP2Q9UDT6 1046 aa23.37■■□□□ 1.33
HOXA6-201ENST00000222728 TESPA1A2RU30 521 aaPredicted RBP23.36■■□□□ 1.33
HOXA6-201ENST00000222728 CYB5R4Q7L1T6 521 aa23.36■■□□□ 1.33
HOXA6-201ENST00000222728 RALYLQ86SE5 291 aaKnown RBP23.36■■□□□ 1.33
HOXA6-201ENST00000222728 NCOA7Q8NI08 942 aa23.36■■□□□ 1.33
HOXA6-201ENST00000222728 BTBD19C9JJ37 291 aa23.35■■□□□ 1.33
HOXA6-201ENST00000222728 TM4SF4P48230 202 aa23.35■■□□□ 1.33
HOXA6-201ENST00000222728 CHST3Q7LGC8 479 aa23.35■■□□□ 1.33
HOXA6-201ENST00000222728 IFNL1Q8IU54 200 aa23.35■■□□□ 1.33
HOXA6-201ENST00000222728 LRRC47Q8N1G4 583 aaKnown RBP23.35■■□□□ 1.33
HOXA6-201ENST00000222728 FAM43AQ8N2R8 423 aa23.35■■□□□ 1.33
HOXA6-201ENST00000222728 KIAA1683Q9H0B3 1180 aa23.35■■□□□ 1.33
HOXA6-201ENST00000222728 EMILIN3Q9NT22 766 aa23.35■■□□□ 1.33
HOXA6-201ENST00000222728 NYAP2Q9P242 653 aa23.35■■□□□ 1.33
HOXA6-201ENST00000222728 C19orf81C9J6K1 198 aa23.34■■□□□ 1.33
HOXA6-201ENST00000222728 TTLL1O95922 423 aa23.34■■□□□ 1.33
HOXA6-201ENST00000222728 ADCK5Q3MIX3 580 aa23.34■■□□□ 1.33
HOXA6-201ENST00000222728 SH3D19Q5HYK7 790 aa23.34■■□□□ 1.33
HOXA6-201ENST00000222728 KIAA1755Q5JYT7 1200 aa23.34■■□□□ 1.33
HOXA6-201ENST00000222728 TREML2Q5T2D2 321 aa23.34■■□□□ 1.33
HOXA6-201ENST00000222728 USP17L2Q6R6M4 530 aa23.34■■□□□ 1.33
HOXA6-201ENST00000222728 TMOD4Q9NZQ9 345 aa23.34■■□□□ 1.33
HOXA6-201ENST00000222728 STX8Q9UNK0 236 aa23.34■■□□□ 1.33
HOXA6-201ENST00000222728 TMX2Q9Y320 296 aa23.34■■□□□ 1.33
HOXA6-201ENST00000222728 SNX14Q9Y5W7 946 aa23.34■■□□□ 1.33
HOXA6-201ENST00000222728 RLFQ13129 1914 aa23.33■■□□□ 1.33
HOXA6-201ENST00000222728 RAD21O60216 631 aa23.33■■□□□ 1.33
HOXA6-201ENST00000222728 ZKSCAN1P17029 563 aaPredicted RBP23.33■■□□□ 1.33
HOXA6-201ENST00000222728 INHBEP58166 350 aa23.33■■□□□ 1.33
HOXA6-201ENST00000222728 GPAT2Q6NUI2 795 aa23.33■■□□□ 1.33
HOXA6-201ENST00000222728 FASTKD5Q7L8L6 764 aaKnown RBP23.33■■□□□ 1.33
HOXA6-201ENST00000222728 MB21D2Q8IYB1 491 aaPredicted RBP23.33■■□□□ 1.33
HOXA6-201ENST00000222728 KCNB2Q92953 911 aa23.33■■□□□ 1.33
HOXA6-201ENST00000222728 TCP11L1Q9NUJ3 509 aa23.33■■□□□ 1.33
HOXA6-201ENST00000222728 COL11A1P12107 1806 aaPredicted RBP23.32■■□□□ 1.32
HOXA6-201ENST00000222728 EPB41L2O43491 1005 aaKnown RBP23.32■■□□□ 1.32
HOXA6-201ENST00000222728 USP14P54578 494 aa23.32■■□□□ 1.32
HOXA6-201ENST00000222728 IQCA1Q86XH1 822 aa23.32■■□□□ 1.32
HOXA6-201ENST00000222728 REM2Q8IYK8 340 aaPredicted RBP23.32■■□□□ 1.32
HOXA6-201ENST00000222728 SPICE1Q8N0Z3 855 aa23.32■■□□□ 1.32
HOXA6-201ENST00000222728 JMYQ8N9B5 988 aa23.32■■□□□ 1.32
HOXA6-201ENST00000222728 CHMP4CQ96CF2 233 aa23.32■■□□□ 1.32
HOXA6-201ENST00000222728 SH2D4AQ9H788 454 aa23.32■■□□□ 1.32
HOXA6-201ENST00000222728 MCCP23508 829 aa23.31■■□□□ 1.32
HOXA6-201ENST00000222728 ANTXR2P58335 489 aa23.31■■□□□ 1.32
HOXA6-201ENST00000222728 MAP2K1Q02750 393 aaPredicted RBP23.31■■□□□ 1.32
HOXA6-201ENST00000222728 TSGA10IPQ3SY00 556 aa23.31■■□□□ 1.32
HOXA6-201ENST00000222728 RCSD1Q6JBY9 416 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms