RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 VSTM4Q8IW00 320 aa16.95■□□□□ 0.3
UBE2D4-201ENST00000222402 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.95■□□□□ 0.3
UBE2D4-201ENST00000222402 A0A0U1RQG5 324 aaPredicted RBP16.95■□□□□ 0.3
UBE2D4-201ENST00000222402 ERICH4A6NGS2 130 aa16.95■□□□□ 0.3
UBE2D4-201ENST00000222402 POLR3GO15318 223 aaPredicted RBP16.95■□□□□ 0.3
UBE2D4-201ENST00000222402 NAPAP54920 295 aa16.95■□□□□ 0.3
UBE2D4-201ENST00000222402 SRRTQ9BXP5 876 aaKnown RBP16.95■□□□□ 0.3
UBE2D4-201ENST00000222402 FAM205CA6NFA0 338 aa16.94■□□□□ 0.3
UBE2D4-201ENST00000222402 CAMTA2O94983 1202 aa16.94■□□□□ 0.3
UBE2D4-201ENST00000222402 SPAG1Q07617 926 aa16.94■□□□□ 0.3
UBE2D4-201ENST00000222402 PTPAQ15257 358 aa16.94■□□□□ 0.3
UBE2D4-201ENST00000222402 TRIML1Q8N9V2 468 aa16.94■□□□□ 0.3
UBE2D4-201ENST00000222402 CCDC148Q8NFR7 591 aa16.94■□□□□ 0.3
UBE2D4-201ENST00000222402 CAGE1Q8TC20 777 aa16.94■□□□□ 0.3
UBE2D4-201ENST00000222402 GPKOWQ92917 476 aaPredicted RBP eCLIP16.94■□□□□ 0.3
UBE2D4-201ENST00000222402 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.94■□□□□ 0.3
UBE2D4-201ENST00000222402 PPP2R2CQ9Y2T4 447 aa16.94■□□□□ 0.3
UBE2D4-201ENST00000222402 PNPLA7Q6ZV29 1317 aa16.94■□□□□ 0.3
UBE2D4-201ENST00000222402 RIC1Q4ADV7 1423 aa16.94■□□□□ 0.3
UBE2D4-201ENST00000222402 TCRBV5S4A2TA0A5A2 114 aa16.94■□□□□ 0.3
UBE2D4-201ENST00000222402 MYO1BO43795 1136 aa16.94■□□□□ 0.3
UBE2D4-201ENST00000222402 SCG2P13521 617 aa16.94■□□□□ 0.3
UBE2D4-201ENST00000222402 NTRK3Q16288 839 aa16.94■□□□□ 0.3
UBE2D4-201ENST00000222402 MINPP1Q9UNW1 487 aa16.94■□□□□ 0.3
UBE2D4-201ENST00000222402 PLEKHG2Q9H7P9 1386 aa16.94■□□□□ 0.3
UBE2D4-201ENST00000222402 PLCD1P51178 756 aa16.94■□□□□ 0.3
UBE2D4-201ENST00000222402 USP49Q70CQ1 688 aa16.94■□□□□ 0.3
UBE2D4-201ENST00000222402 TRIM34Q9BYJ4 488 aa16.94■□□□□ 0.3
UBE2D4-201ENST00000222402 CCNL1Q9UK58 526 aaPredicted RBP16.94■□□□□ 0.3
UBE2D4-201ENST00000222402 NMT2O60551 498 aa16.93■□□□□ 0.3
UBE2D4-201ENST00000222402 GSTO1P78417 241 aa16.93■□□□□ 0.3
UBE2D4-201ENST00000222402 ITPK1Q13572 414 aa16.93■□□□□ 0.3
UBE2D4-201ENST00000222402 KIAA1328Q86T90 577 aa16.93■□□□□ 0.3
UBE2D4-201ENST00000222402 BSDC1Q9NW68 430 aaPredicted RBP16.93■□□□□ 0.3
UBE2D4-201ENST00000222402 SRP68Q9UHB9 627 aaKnown RBP16.93■□□□□ 0.3
UBE2D4-201ENST00000222402 TUBE1Q9UJT0 475 aa16.93■□□□□ 0.3
UBE2D4-201ENST00000222402 PRDX5P30044 214 aa16.93■□□□□ 0.3
UBE2D4-201ENST00000222402 CDC25AP30304 524 aa16.93■□□□□ 0.3
UBE2D4-201ENST00000222402 MECOMQ03112 1051 aa16.93■□□□□ 0.3
UBE2D4-201ENST00000222402 CCDC178Q5BJE1 867 aa16.93■□□□□ 0.3
UBE2D4-201ENST00000222402 E4F1Q66K89 784 aaPredicted RBP16.93■□□□□ 0.3
UBE2D4-201ENST00000222402 NAP1L1P55209 391 aaKnown RBP16.93■□□□□ 0.3
UBE2D4-201ENST00000222402 MAPKAPK5Q8IW41 473 aa16.93■□□□□ 0.3
UBE2D4-201ENST00000222402 TGFBRAP1Q8WUH2 860 aa16.93■□□□□ 0.3
UBE2D4-201ENST00000222402 UBXN1Q04323 297 aa16.92■□□□□ 0.3
UBE2D4-201ENST00000222402 PNMA1Q8ND90 353 aa16.92■□□□□ 0.3
UBE2D4-201ENST00000222402 ENOX1Q8TC92 643 aaKnown RBP16.92■□□□□ 0.3
UBE2D4-201ENST00000222402 ZBTB9Q96C00 473 aa16.92■□□□□ 0.3
UBE2D4-201ENST00000222402 TAB2Q9NYJ8 693 aa16.92■□□□□ 0.3
UBE2D4-201ENST00000222402 ARPP21Q9UBL0 812 aaPredicted RBP16.92■□□□□ 0.3
UBE2D4-201ENST00000222402 MARF1Q9Y4F3 1742 aaKnown RBP16.92■□□□□ 0.3
UBE2D4-201ENST00000222402 CYP2D6P10635 497 aa16.92■□□□□ 0.3
UBE2D4-201ENST00000222402 MTIF2P46199 727 aaKnown RBP16.92■□□□□ 0.3
UBE2D4-201ENST00000222402 FAM182BQ5T319 152 aa16.92■□□□□ 0.3
UBE2D4-201ENST00000222402 GOLGA6L1Q8N7Z2 621 aa16.92■□□□□ 0.3
UBE2D4-201ENST00000222402 RASGRP4Q8TDF6 673 aa16.92■□□□□ 0.3
UBE2D4-201ENST00000222402 TANGO6Q9C0B7 1094 aa16.92■□□□□ 0.3
UBE2D4-201ENST00000222402 PRPF3O43395 683 aaKnown RBP16.92■□□□□ 0.3
UBE2D4-201ENST00000222402 DDAH1O94760 285 aa16.92■□□□□ 0.3
UBE2D4-201ENST00000222402 NTSR2O95665 410 aa16.92■□□□□ 0.3
UBE2D4-201ENST00000222402 SLFN14P0C7P3 912 aa16.92■□□□□ 0.3
UBE2D4-201ENST00000222402 IDEP14735 1019 aa16.92■□□□□ 0.3
UBE2D4-201ENST00000222402 IKQ13123 557 aaPredicted RBP16.92■□□□□ 0.3
UBE2D4-201ENST00000222402 ZNF569Q5MCW4 686 aa16.92■□□□□ 0.3
UBE2D4-201ENST00000222402 INTS5Q6P9B9 1019 aaKnown RBP16.92■□□□□ 0.3
UBE2D4-201ENST00000222402 ZNF804AQ7Z570 1209 aa16.92■□□□□ 0.3
UBE2D4-201ENST00000222402 FBXO2Q9UK22 296 aaPredicted RBP16.92■□□□□ 0.3
UBE2D4-201ENST00000222402 LETM2Q2VYF4 491 aa16.91■□□□□ 0.3
UBE2D4-201ENST00000222402 PUF60Q9UHX1 559 aaKnown RBP16.91■□□□□ 0.3
UBE2D4-201ENST00000222402 BAZ2BQ9UIF8 2168 aaKnown RBP16.91■□□□□ 0.3
UBE2D4-201ENST00000222402 MRC1P22897 1456 aa16.91■□□□□ 0.3
UBE2D4-201ENST00000222402 C5P01031 1676 aa16.91■□□□□ 0.3
UBE2D4-201ENST00000222402 ZNF804BA4D1E1 1349 aa16.91■□□□□ 0.3
UBE2D4-201ENST00000222402 F8W031 263 aaPredicted RBP16.91■□□□□ 0.3
UBE2D4-201ENST00000222402 PSMA7O14818 248 aa16.91■□□□□ 0.3
UBE2D4-201ENST00000222402 SPATA1Q5VX52 437 aa16.91■□□□□ 0.3
UBE2D4-201ENST00000222402 CNGA4Q8IV77 575 aa16.91■□□□□ 0.3
UBE2D4-201ENST00000222402 DEF6Q9H4E7 631 aa16.91■□□□□ 0.3
UBE2D4-201ENST00000222402 ZHX3Q9H4I2 956 aa16.91■□□□□ 0.3
UBE2D4-201ENST00000222402 FAM217BQ9NTX9 383 aaPredicted RBP16.91■□□□□ 0.3
UBE2D4-201ENST00000222402 SCN11AQ9UI33 1791 aa16.91■□□□□ 0.3
UBE2D4-201ENST00000222402 MPHOSPH10O00566 681 aaKnown RBP16.91■□□□□ 0.3
UBE2D4-201ENST00000222402 USP17L8P0C7I0 530 aa16.91■□□□□ 0.3
UBE2D4-201ENST00000222402 PAK1Q13153 545 aa16.91■□□□□ 0.3
UBE2D4-201ENST00000222402 FAM84BQ96KN1 310 aaPredicted RBP16.91■□□□□ 0.3
UBE2D4-201ENST00000222402 ATP8A2Q9NTI2 1148 aa16.91■□□□□ 0.3
UBE2D4-201ENST00000222402 ASIC1P78348 528 aa16.9■□□□□ 0.3
UBE2D4-201ENST00000222402 WWC2Q6AWC2 1192 aa16.9■□□□□ 0.3
UBE2D4-201ENST00000222402 NBPF11Q86T75 865 aa16.9■□□□□ 0.3
UBE2D4-201ENST00000222402 MARCH10Q8NA82 808 aaPredicted RBP16.9■□□□□ 0.3
UBE2D4-201ENST00000222402 MAP3K14Q99558 947 aa16.9■□□□□ 0.3
UBE2D4-201ENST00000222402 BCL9O00512 1426 aa16.9■□□□□ 0.3
UBE2D4-201ENST00000222402 PICALMQ13492 652 aa16.9■□□□□ 0.3
UBE2D4-201ENST00000222402 HSP90B2PQ58FF3 399 aa16.9■□□□□ 0.3
UBE2D4-201ENST00000222402 SAMD1Q6SPF0 538 aaPredicted RBP16.9■□□□□ 0.3
UBE2D4-201ENST00000222402 BLIDQ8IZY5 108 aa16.9■□□□□ 0.3
UBE2D4-201ENST00000222402 TRIM21P19474 475 aaKnown RBP16.9■□□□□ 0.3
UBE2D4-201ENST00000222402 PPP2R3AQ06190 1150 aa16.9■□□□□ 0.3
UBE2D4-201ENST00000222402 CLEC4GQ6UXB4 293 aa16.9■□□□□ 0.3
UBE2D4-201ENST00000222402 WDR66Q8TBY9 1149 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms