RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 TRIM7Q9C029 511 aa21.07■□□□□ 0.96
SMPD3-201ENST00000219334 MAST1Q9Y2H9 1570 aa21.07■□□□□ 0.96
SMPD3-201ENST00000219334 MCF2L2Q86YR7 1114 aa21.07■□□□□ 0.96
SMPD3-201ENST00000219334 ARFGAP2Q8N6H7 521 aa21.07■□□□□ 0.96
SMPD3-201ENST00000219334 RIOK1Q9BRS2 568 aaKnown RBP21.07■□□□□ 0.96
SMPD3-201ENST00000219334 YWHAEP62258 255 aaKnown RBP21.07■□□□□ 0.96
SMPD3-201ENST00000219334 TUBBP07437 444 aa21.07■□□□□ 0.96
SMPD3-201ENST00000219334 TNNI1P19237 187 aa21.07■□□□□ 0.96
SMPD3-201ENST00000219334 RNF169Q8NCN4 708 aa21.07■□□□□ 0.96
SMPD3-201ENST00000219334 VPS54Q9P1Q0 977 aa21.07■□□□□ 0.96
SMPD3-201ENST00000219334 TMEM94Q12767 1356 aa21.07■□□□□ 0.96
SMPD3-201ENST00000219334 hCG_1642624A0A1W2PR95 340 aa21.06■□□□□ 0.96
SMPD3-201ENST00000219334 ZBTB8OSQ8IWT0 167 aa21.06■□□□□ 0.96
SMPD3-201ENST00000219334 NELFCDQ8IXH7 590 aa21.06■□□□□ 0.96
SMPD3-201ENST00000219334 ANAPC4Q9UJX5 808 aa21.06■□□□□ 0.96
SMPD3-201ENST00000219334 KIAA0232Q92628 1395 aa21.06■□□□□ 0.96
SMPD3-201ENST00000219334 POLR2MP0CAP2 368 aa21.06■□□□□ 0.96
SMPD3-201ENST00000219334 ICA1Q05084 483 aa21.06■□□□□ 0.96
SMPD3-201ENST00000219334 GEN1Q17RS7 908 aa21.06■□□□□ 0.96
SMPD3-201ENST00000219334 SLC9C1Q4G0N8 1177 aa21.06■□□□□ 0.96
SMPD3-201ENST00000219334 ZNF654Q8IZM8 581 aa21.06■□□□□ 0.96
SMPD3-201ENST00000219334 STIM2Q9P246 746 aa21.06■□□□□ 0.96
SMPD3-201ENST00000219334 E7EWF7 191 aa21.06■□□□□ 0.96
SMPD3-201ENST00000219334 CRCPO75575 148 aa21.06■□□□□ 0.96
SMPD3-201ENST00000219334 DYNC1I1O14576 645 aa21.06■□□□□ 0.96
SMPD3-201ENST00000219334 BTDP43251 543 aa21.06■□□□□ 0.96
SMPD3-201ENST00000219334 UAP1Q16222 522 aaPredicted RBP21.06■□□□□ 0.96
SMPD3-201ENST00000219334 CTTNBP2NLQ9P2B4 639 aa21.06■□□□□ 0.96
SMPD3-201ENST00000219334 NCAPG2Q86XI2 1143 aa21.05■□□□□ 0.96
SMPD3-201ENST00000219334 PSTPIP2Q9H939 334 aa21.05■□□□□ 0.96
SMPD3-201ENST00000219334 KDM3AQ9Y4C1 1321 aa21.05■□□□□ 0.96
SMPD3-201ENST00000219334 BCAMP50895 628 aa21.05■□□□□ 0.96
SMPD3-201ENST00000219334 GABPAQ06546 454 aa21.05■□□□□ 0.96
SMPD3-201ENST00000219334 KMT5BQ4FZB7 885 aa21.05■□□□□ 0.96
SMPD3-201ENST00000219334 SPATA24Q86W54 205 aa21.05■□□□□ 0.96
SMPD3-201ENST00000219334 CLUL1Q15846 466 aa21.05■□□□□ 0.96
SMPD3-201ENST00000219334 TRIM37O94972 964 aa21.05■□□□□ 0.96
SMPD3-201ENST00000219334 CHRNDQ07001 517 aa21.05■□□□□ 0.96
SMPD3-201ENST00000219334 MAP3K15Q6ZN16 1313 aa21.05■□□□□ 0.96
SMPD3-201ENST00000219334 CYP26C1Q6V0L0 522 aa21.05■□□□□ 0.96
SMPD3-201ENST00000219334 CTTNBP2Q8WZ74 1663 aa21.04■□□□□ 0.96
SMPD3-201ENST00000219334 ZSCAN10Q96SZ4 725 aaPredicted RBP21.04■□□□□ 0.96
SMPD3-201ENST00000219334 FLOT1O75955 427 aa21.04■□□□□ 0.96
SMPD3-201ENST00000219334 CRKLP46109 303 aaKnown RBP21.04■□□□□ 0.96
SMPD3-201ENST00000219334 ACTN4O43707 911 aaKnown RBP21.04■□□□□ 0.96
SMPD3-201ENST00000219334 RHOXF2BP0C7M4 288 aa21.04■□□□□ 0.96
SMPD3-201ENST00000219334 SYT10Q6XYQ8 523 aa21.04■□□□□ 0.96
SMPD3-201ENST00000219334 IFNL3Q8IZI9 196 aa21.04■□□□□ 0.96
SMPD3-201ENST00000219334 KRT222Q8N1A0 295 aa21.04■□□□□ 0.96
SMPD3-201ENST00000219334 RHOXF2Q9BQY4 288 aa21.04■□□□□ 0.96
SMPD3-201ENST00000219334 ADPGKQ9BRR6 497 aa21.04■□□□□ 0.96
SMPD3-201ENST00000219334 NBPF3Q9H094 633 aa21.04■□□□□ 0.96
SMPD3-201ENST00000219334 KDRP35968 1356 aa21.03■□□□□ 0.96
SMPD3-201ENST00000219334 PALM3A6NDB9 673 aaPredicted RBP21.03■□□□□ 0.96
SMPD3-201ENST00000219334 EP400NLQ6ZTU2 488 aa21.03■□□□□ 0.96
SMPD3-201ENST00000219334 FBXO11Q86XK2 927 aa21.03■□□□□ 0.96
SMPD3-201ENST00000219334 YEATS2Q9ULM3 1422 aa21.03■□□□□ 0.96
SMPD3-201ENST00000219334 KCNQ3O43525 872 aa21.03■□□□□ 0.96
SMPD3-201ENST00000219334 GMNNO75496 209 aa21.03■□□□□ 0.96
SMPD3-201ENST00000219334 IL17REQ8NFR9 667 aa21.03■□□□□ 0.96
SMPD3-201ENST00000219334 TBC1D31Q96DN5 1066 aa21.03■□□□□ 0.96
SMPD3-201ENST00000219334 ZNF804BA4D1E1 1349 aa21.03■□□□□ 0.96
SMPD3-201ENST00000219334 YARSP54577 528 aaKnown RBP21.03■□□□□ 0.96
SMPD3-201ENST00000219334 PDE6AP16499 860 aa21.03■□□□□ 0.96
SMPD3-201ENST00000219334 MAPKBP1O60336 1514 aa21.03■□□□□ 0.96
SMPD3-201ENST00000219334 PPEF1O14829 653 aaPredicted RBP21.02■□□□□ 0.96
SMPD3-201ENST00000219334 ZNF202O95125 648 aa21.02■□□□□ 0.96
SMPD3-201ENST00000219334 CCNA1P78396 465 aa21.02■□□□□ 0.96
SMPD3-201ENST00000219334 FAM102BQ5T8I3 360 aa21.02■□□□□ 0.96
SMPD3-201ENST00000219334 UBLCP1Q8WVY7 318 aaPredicted RBP21.02■□□□□ 0.96
SMPD3-201ENST00000219334 NKIRAS1Q9NYS0 192 aa21.02■□□□□ 0.96
SMPD3-201ENST00000219334 USTQ9Y2C2 406 aa21.02■□□□□ 0.96
SMPD3-201ENST00000219334 PCDHB13Q9Y5F0 798 aa21.02■□□□□ 0.96
SMPD3-201ENST00000219334 XDHP47989 1333 aa21.02■□□□□ 0.96
SMPD3-201ENST00000219334 CD2APQ9Y5K6 639 aa21.02■□□□□ 0.96
SMPD3-201ENST00000219334 TMC4Q7Z404 712 aa21.02■□□□□ 0.96
SMPD3-201ENST00000219334 IPO4Q8TEX9 1081 aaKnown RBP21.02■□□□□ 0.96
SMPD3-201ENST00000219334 FAM193BQ96PV7 902 aaPredicted RBP21.02■□□□□ 0.96
SMPD3-201ENST00000219334 ZKSCAN5Q9Y2L8 839 aa21.02■□□□□ 0.96
SMPD3-201ENST00000219334 ZFYVE16Q7Z3T8 1539 aa21.02■□□□□ 0.96
SMPD3-201ENST00000219334 PNMA1Q8ND90 353 aa21.02■□□□□ 0.96
SMPD3-201ENST00000219334 NEO1Q92859 1461 aa21.02■□□□□ 0.95
SMPD3-201ENST00000219334 PRR16Q569H4 304 aa21.01■□□□□ 0.95
SMPD3-201ENST00000219334 LRRC47Q8N1G4 583 aaKnown RBP21.01■□□□□ 0.95
SMPD3-201ENST00000219334 PRDM10Q9NQV6 1147 aa21.01■□□□□ 0.95
SMPD3-201ENST00000219334 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.01■□□□□ 0.95
SMPD3-201ENST00000219334 FRMPD2Q68DX3 1309 aaPredicted RBP21.01■□□□□ 0.95
SMPD3-201ENST00000219334 GIPC1O14908 333 aa21.01■□□□□ 0.95
SMPD3-201ENST00000219334 CCDC84Q86UT8 332 aaPredicted RBP21.01■□□□□ 0.95
SMPD3-201ENST00000219334 ATP5DP30049 168 aa21.01■□□□□ 0.95
SMPD3-201ENST00000219334 GSDMBQ8TAX9 411 aa21.01■□□□□ 0.95
SMPD3-201ENST00000219334 ANO3Q9BYT9 981 aa21.01■□□□□ 0.95
SMPD3-201ENST00000219334 KCTD2Q14681 263 aa21.01■□□□□ 0.95
SMPD3-201ENST00000219334 POSTNQ15063 836 aa21.01■□□□□ 0.95
SMPD3-201ENST00000219334 ABCB5Q2M3G0 1257 aa21.01■□□□□ 0.95
SMPD3-201ENST00000219334 CPLX4Q7Z7G2 160 aa21.01■□□□□ 0.95
SMPD3-201ENST00000219334 SDR42E1Q8WUS8 393 aa21.01■□□□□ 0.95
SMPD3-201ENST00000219334 H0YCG3 227 aa21.01■□□□□ 0.95
SMPD3-201ENST00000219334 SLFN13Q68D06 897 aa21.01■□□□□ 0.95
SMPD3-201ENST00000219334 CLSTN2Q9H4D0 955 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms