RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 UFL1O94874 794 aa11.49□□□□□ -0.57
USP11-201ENST00000218348 PTGS1P23219 599 aa11.49□□□□□ -0.57
USP11-201ENST00000218348 GRIN1Q05586 938 aa11.49□□□□□ -0.57
USP11-201ENST00000218348 FAM160A1Q05DH4 1040 aa11.49□□□□□ -0.57
USP11-201ENST00000218348 LRMPQ12912 555 aa11.49□□□□□ -0.57
USP11-201ENST00000218348 DIS3L2Q8IYB7 885 aaKnown RBP11.49□□□□□ -0.57
USP11-201ENST00000218348 TRIM22Q8IYM9 498 aa11.49□□□□□ -0.57
USP11-201ENST00000218348 ENAHQ8N8S7 591 aaPredicted RBP11.49□□□□□ -0.57
USP11-201ENST00000218348 ESR2Q92731 530 aa11.49□□□□□ -0.57
USP11-201ENST00000218348 FHDC1Q9C0D6 1143 aaPredicted RBP11.49□□□□□ -0.57
USP11-201ENST00000218348 VEGFAP15692 232 aaPredicted RBP11.48□□□□□ -0.57
USP11-201ENST00000218348 GNAT2P19087 354 aa11.48□□□□□ -0.57
USP11-201ENST00000218348 MMP14P50281 582 aa11.48□□□□□ -0.57
USP11-201ENST00000218348 AKAP17AQ02040 695 aaKnown RBP11.48□□□□□ -0.57
USP11-201ENST00000218348 NOM1Q5C9Z4 860 aaKnown RBP11.48□□□□□ -0.57
USP11-201ENST00000218348 ZNF771Q7L3S4 317 aaPredicted RBP11.48□□□□□ -0.57
USP11-201ENST00000218348 FBXO33Q7Z6M2 555 aa11.48□□□□□ -0.57
USP11-201ENST00000218348 MAPKAPK5Q8IW41 473 aa11.48□□□□□ -0.57
USP11-201ENST00000218348 SP8Q8IXZ3 490 aa11.48□□□□□ -0.57
USP11-201ENST00000218348 FANCBQ8NB91 859 aa11.48□□□□□ -0.57
USP11-201ENST00000218348 RBM17Q96I25 401 aaKnown RBP11.48□□□□□ -0.57
USP11-201ENST00000218348 TSPY2A6NKD2 308 aa11.48□□□□□ -0.57
USP11-201ENST00000218348 ALX1Q15699 326 aa11.48□□□□□ -0.57
USP11-201ENST00000218348 RASGRP2Q7LDG7 609 aa11.48□□□□□ -0.57
USP11-201ENST00000218348 AOPEPQ8N6M6 819 aa11.48□□□□□ -0.57
USP11-201ENST00000218348 TGFBRAP1Q8WUH2 860 aa11.48□□□□□ -0.57
USP11-201ENST00000218348 STAG1Q8WVM7 1258 aa11.48□□□□□ -0.57
USP11-201ENST00000218348 TSC1Q92574 1164 aa11.48□□□□□ -0.57
USP11-201ENST00000218348 CPVLQ9H3G5 476 aa11.48□□□□□ -0.57
USP11-201ENST00000218348 RTEL1Q9NZ71 1219 aa11.48□□□□□ -0.57
USP11-201ENST00000218348 ADAMTSL1Q8N6G6 1762 aa11.48□□□□□ -0.57
USP11-201ENST00000218348 BBOX1O75936 387 aa11.48□□□□□ -0.57
USP11-201ENST00000218348 PFKFB1P16118 471 aa11.48□□□□□ -0.57
USP11-201ENST00000218348 POLD1P28340 1107 aa11.48□□□□□ -0.57
USP11-201ENST00000218348 CABP5Q9NP86 173 aa11.48□□□□□ -0.57
USP11-201ENST00000218348 MROH7-TTC4A0A0A0MT08 1334 aa11.48□□□□□ -0.57
USP11-201ENST00000218348 BAZ2AQ9UIF9 1905 aaKnown RBP11.47□□□□□ -0.57
USP11-201ENST00000218348 ZNF202O95125 648 aa11.47□□□□□ -0.57
USP11-201ENST00000218348 GPSM2P81274 684 aa11.47□□□□□ -0.57
USP11-201ENST00000218348 KIAA2012Q0VF49 1180 aa11.47□□□□□ -0.57
USP11-201ENST00000218348 CCDC186Q7Z3E2 898 aa11.47□□□□□ -0.57
USP11-201ENST00000218348 FILIP1Q7Z7B0 1213 aa11.47□□□□□ -0.57
USP11-201ENST00000218348 SH3RF3Q8TEJ3 882 aaPredicted RBP11.47□□□□□ -0.57
USP11-201ENST00000218348 SYT17Q9BSW7 474 aa11.47□□□□□ -0.57
USP11-201ENST00000218348 RNF41Q9H4P4 317 aaPredicted RBP11.47□□□□□ -0.57
USP11-201ENST00000218348 FOXN1O15353 648 aa11.47□□□□□ -0.57
USP11-201ENST00000218348 OFD1O75665 1012 aa11.47□□□□□ -0.57
USP11-201ENST00000218348 ARID5BQ14865 1188 aa11.47□□□□□ -0.57
USP11-201ENST00000218348 UVSSAQ2YD98 709 aa11.47□□□□□ -0.57
USP11-201ENST00000218348 DCP1AQ9NPI6 582 aaPredicted RBP11.47□□□□□ -0.57
USP11-201ENST00000218348 POLLQ9UGP5 575 aa11.47□□□□□ -0.57
USP11-201ENST00000218348 CDK5RAP2Q96SN8 1893 aa11.47□□□□□ -0.57
USP11-201ENST00000218348 PPEF1O14829 653 aaPredicted RBP11.47□□□□□ -0.57
USP11-201ENST00000218348 LDHBP07195 334 aaKnown RBP11.47□□□□□ -0.57
USP11-201ENST00000218348 SAFBQ15424 915 aaKnown RBP eCLIP11.47□□□□□ -0.57
USP11-201ENST00000218348 DPCR1Q3MIW9 517 aa11.47□□□□□ -0.57
USP11-201ENST00000218348 ADALQ6DHV7 355 aa11.47□□□□□ -0.57
USP11-201ENST00000218348 ZSCAN10Q96SZ4 725 aaPredicted RBP11.47□□□□□ -0.57
USP11-201ENST00000218348 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.47□□□□□ -0.57
USP11-201ENST00000218348 MXD3Q9BW11 206 aa11.47□□□□□ -0.57
USP11-201ENST00000218348 CRNKL1Q9BZJ0 848 aaKnown RBP11.47□□□□□ -0.57
USP11-201ENST00000218348 PYCARDQ9ULZ3 195 aa11.47□□□□□ -0.57
USP11-201ENST00000218348 FOCADQ5VW36 1801 aa11.46□□□□□ -0.57
USP11-201ENST00000218348 LIFRP42702 1097 aa11.46□□□□□ -0.57
USP11-201ENST00000218348 TMC4Q7Z404 712 aa11.46□□□□□ -0.57
USP11-201ENST00000218348 SGMS1Q86VZ5 419 aa11.46□□□□□ -0.57
USP11-201ENST00000218348 IQCA1Q86XH1 822 aa11.46□□□□□ -0.57
USP11-201ENST00000218348 GRAMD1CQ8IYS0 662 aa11.46□□□□□ -0.57
USP11-201ENST00000218348 FMR1NBQ8N0W7 255 aaPredicted RBP11.46□□□□□ -0.57
USP11-201ENST00000218348 ENGASEQ8NFI3 743 aa11.46□□□□□ -0.57
USP11-201ENST00000218348 ANKRD2Q9GZV1 360 aa11.46□□□□□ -0.57
USP11-201ENST00000218348 STX8Q9UNK0 236 aa11.46□□□□□ -0.57
USP11-201ENST00000218348 PCDHB6Q9Y5E3 794 aa11.46□□□□□ -0.57
USP11-201ENST00000218348 USP17L3A6NCW0 530 aa11.46□□□□□ -0.58
USP11-201ENST00000218348 USP17L4A6NCW7 530 aa11.46□□□□□ -0.58
USP11-201ENST00000218348 SLURP2P0DP57 97 aa11.46□□□□□ -0.58
USP11-201ENST00000218348 PNOCQ13519 176 aa11.46□□□□□ -0.58
USP11-201ENST00000218348 USP17L1Q7RTZ2 530 aa11.46□□□□□ -0.58
USP11-201ENST00000218348 KCNG4Q8TDN1 519 aa11.46□□□□□ -0.58
USP11-201ENST00000218348 DDX60LQ5H9U9 1706 aaKnown RBP11.46□□□□□ -0.58
USP11-201ENST00000218348 H0YIN7 160 aa11.45□□□□□ -0.58
USP11-201ENST00000218348 USP49Q70CQ1 688 aa11.45□□□□□ -0.58
USP11-201ENST00000218348 BRAPQ7Z569 592 aa11.45□□□□□ -0.58
USP11-201ENST00000218348 CATIPQ7Z7H3 387 aa11.45□□□□□ -0.58
USP11-201ENST00000218348 TICAM2Q86XR7 235 aa11.45□□□□□ -0.58
USP11-201ENST00000218348 CRACR2BQ8N4Y2 399 aaPredicted RBP11.45□□□□□ -0.58
USP11-201ENST00000218348 ZNF622Q969S3 477 aaKnown RBP eCLIP11.45□□□□□ -0.58
USP11-201ENST00000218348 LTBP3Q9NS15 1303 aa11.45□□□□□ -0.58
USP11-201ENST00000218348 MYH2Q9UKX2 1941 aa11.45□□□□□ -0.58
USP11-201ENST00000218348 SLC3A2P08195 630 aaKnown RBP11.45□□□□□ -0.58
USP11-201ENST00000218348 GOLGA8HP0CJ92 632 aa11.45□□□□□ -0.58
USP11-201ENST00000218348 ALDH1B1P30837 517 aa11.45□□□□□ -0.58
USP11-201ENST00000218348 SYKP43405 635 aa11.45□□□□□ -0.58
USP11-201ENST00000218348 PICALMQ13492 652 aa11.45□□□□□ -0.58
USP11-201ENST00000218348 EARS2Q5JPH6 523 aaKnown RBP11.45□□□□□ -0.58
USP11-201ENST00000218348 MKNK2Q9HBH9 465 aa11.45□□□□□ -0.58
USP11-201ENST00000218348 NFKBIEO00221 500 aa11.45□□□□□ -0.58
USP11-201ENST00000218348 FMNL1O95466 1100 aaPredicted RBP11.45□□□□□ -0.58
USP11-201ENST00000218348 YBX3P16989 372 aaKnown RBP eCLIP11.45□□□□□ -0.581e-6■■□□□ 11.7
USP11-201ENST00000218348 IFNAR1P17181 557 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms