RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 PPP2R3AQ06190 1150 aa11.04□□□□□ -0.64
CSTF1-201ENST00000217109 CACNA2D4Q7Z3S7 1137 aa11.04□□□□□ -0.64
CSTF1-201ENST00000217109 DPF2Q92785 391 aa11.04□□□□□ -0.64
CSTF1-201ENST00000217109 RUFY1Q96T51 708 aa11.04□□□□□ -0.64
CSTF1-201ENST00000217109 PYM1Q9BRP8 204 aaKnown RBP11.04□□□□□ -0.64
CSTF1-201ENST00000217109 SRRTQ9BXP5 876 aaKnown RBP11.04□□□□□ -0.64
CSTF1-201ENST00000217109 CDHR2Q9BYE9 1310 aa11.03□□□□□ -0.64
CSTF1-201ENST00000217109 RIMBP2O15034 1052 aa11.03□□□□□ -0.64
CSTF1-201ENST00000217109 NMT2O60551 498 aa11.03□□□□□ -0.64
CSTF1-201ENST00000217109 KRT9P35527 623 aa11.03□□□□□ -0.64
CSTF1-201ENST00000217109 FERMT2Q96AC1 680 aa11.03□□□□□ -0.64
CSTF1-201ENST00000217109 CCNL1Q9UK58 526 aaPredicted RBP11.03□□□□□ -0.64
CSTF1-201ENST00000217109 MATR3P43243 847 aaKnown RBP eCLIP11.03□□□□□ -0.64
CSTF1-201ENST00000217109 PPP2R5BQ15173 497 aa11.03□□□□□ -0.64
CSTF1-201ENST00000217109 TDRD12Q587J7 1177 aaKnown RBP11.03□□□□□ -0.64
CSTF1-201ENST00000217109 RESP18Q5W5W9 173 aa11.03□□□□□ -0.64
CSTF1-201ENST00000217109 WWC2Q6AWC2 1192 aa11.03□□□□□ -0.64
CSTF1-201ENST00000217109 EPB41L4AQ9HCS5 686 aaPredicted RBP11.03□□□□□ -0.64
CSTF1-201ENST00000217109 JADE2Q9NQC1 790 aa11.03□□□□□ -0.64
CSTF1-201ENST00000217109 OVOS2A0A0G2JMS6 1433 aa11.03□□□□□ -0.64
CSTF1-201ENST00000217109 CTAGE9A4FU28 777 aa11.03□□□□□ -0.64
CSTF1-201ENST00000217109 EIF3JO75822 258 aaKnown RBP11.03□□□□□ -0.64
CSTF1-201ENST00000217109 TUBB4AP04350 444 aa11.03□□□□□ -0.64
CSTF1-201ENST00000217109 UBE4AQ14139 1066 aa11.03□□□□□ -0.64
CSTF1-201ENST00000217109 TMEM266Q2M3C6 531 aa11.03□□□□□ -0.64
CSTF1-201ENST00000217109 ARMCX5Q6P1M9 558 aa11.03□□□□□ -0.64
CSTF1-201ENST00000217109 TICAM2Q86XR7 235 aa11.03□□□□□ -0.64
CSTF1-201ENST00000217109 CNGA4Q8IV77 575 aa11.03□□□□□ -0.64
CSTF1-201ENST00000217109 RNF26Q9BY78 433 aaPredicted RBP11.03□□□□□ -0.64
CSTF1-201ENST00000217109 KCNQ2O43526 872 aa11.02□□□□□ -0.64
CSTF1-201ENST00000217109 GSTO1P78417 241 aa11.02□□□□□ -0.64
CSTF1-201ENST00000217109 PAK1Q13153 545 aa11.02□□□□□ -0.64
CSTF1-201ENST00000217109 USP49Q70CQ1 688 aa11.02□□□□□ -0.64
CSTF1-201ENST00000217109 LRP10Q7Z4F1 713 aa11.02□□□□□ -0.64
CSTF1-201ENST00000217109 TEX11Q8IYF3 940 aa11.02□□□□□ -0.64
CSTF1-201ENST00000217109 PNMA1Q8ND90 353 aa11.02□□□□□ -0.64
CSTF1-201ENST00000217109 CDCA7Q9BWT1 371 aaPredicted RBP11.02□□□□□ -0.64
CSTF1-201ENST00000217109 PLA2G12BQ9BX93 195 aa11.02□□□□□ -0.64
CSTF1-201ENST00000217109 LUC7L2Q9Y383 392 aaKnown RBP11.02□□□□□ -0.64
CSTF1-201ENST00000217109 PSDA5PKW4 1024 aaPredicted RBP11.02□□□□□ -0.65
CSTF1-201ENST00000217109 FAM205CA6NFA0 338 aa11.02□□□□□ -0.65
CSTF1-201ENST00000217109 PRR29P0C7W0 189 aa11.02□□□□□ -0.65
CSTF1-201ENST00000217109 SCG2P13521 617 aa11.02□□□□□ -0.65
CSTF1-201ENST00000217109 TNNI2P48788 182 aa11.02□□□□□ -0.65
CSTF1-201ENST00000217109 ILDR1Q86SU0 546 aaPredicted RBP11.02□□□□□ -0.65
CSTF1-201ENST00000217109 GOLGA1Q92805 767 aa11.02□□□□□ -0.65
CSTF1-201ENST00000217109 CAPZA3Q96KX2 299 aa11.02□□□□□ -0.65
CSTF1-201ENST00000217109 SLF1Q9BQI6 1058 aa11.02□□□□□ -0.65
CSTF1-201ENST00000217109 MROH7-TTC4A0A0A0MT08 1334 aa11.02□□□□□ -0.65
CSTF1-201ENST00000217109 PTPREP23469 700 aa11.02□□□□□ -0.65
CSTF1-201ENST00000217109 ARID4AP29374 1257 aaPredicted RBP11.02□□□□□ -0.65
CSTF1-201ENST00000217109 AMPD3Q01432 767 aa11.02□□□□□ -0.65
CSTF1-201ENST00000217109 INF2Q27J81 1249 aa11.02□□□□□ -0.65
CSTF1-201ENST00000217109 ZNF804AQ7Z570 1209 aa11.02□□□□□ -0.65
CSTF1-201ENST00000217109 NELFBQ8WX92 580 aa11.02□□□□□ -0.65
CSTF1-201ENST00000217109 UBA5Q9GZZ9 404 aa11.02□□□□□ -0.65
CSTF1-201ENST00000217109 MMRN2Q9H8L6 949 aa11.02□□□□□ -0.65
CSTF1-201ENST00000217109 SRP68Q9UHB9 627 aaKnown RBP11.02□□□□□ -0.65
CSTF1-201ENST00000217109 LMTK3Q96Q04 1460 aa11.02□□□□□ -0.65
CSTF1-201ENST00000217109 PHACTR2O75167 634 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 UFL1O94874 794 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 CYP2D6P10635 497 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 PRDX5P30044 214 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 GRIN1Q05586 938 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 RBM43Q6ZSC3 357 aaKnown RBP11.01□□□□□ -0.65
CSTF1-201ENST00000217109 SGMS1Q86VZ5 419 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 METTL16Q86W50 562 aaKnown RBP11.01□□□□□ -0.65
CSTF1-201ENST00000217109 RAB34Q9BZG1 259 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 CTAGE15A4D2H0 777 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 AKR1B10O60218 316 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 CCNT1O60563 726 aaKnown RBP11.01□□□□□ -0.65
CSTF1-201ENST00000217109 USP17L8P0C7I0 530 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 CTAGE8P0CG41 777 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 TXKP42681 527 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 PLCD1P51178 756 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 NKX1-1Q15270 411 aaPredicted RBP11.01□□□□□ -0.65
CSTF1-201ENST00000217109 CTAGE6Q86UF2 777 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 CTAGE4Q8IX94 777 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 ENAHQ8N8S7 591 aaPredicted RBP11.01□□□□□ -0.65
CSTF1-201ENST00000217109 STAG1Q8WVM7 1258 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 CELF1Q92879 486 aaKnown RBP11.01□□□□□ -0.65
CSTF1-201ENST00000217109 AGXT2Q9BYV1 514 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 C6orf50Q9HD87 102 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 BAZ2BQ9UIF8 2168 aaKnown RBP11.01□□□□□ -0.65
CSTF1-201ENST00000217109 CCZ1BP86790 482 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 CCZ1P86791 482 aaPredicted RBP11.01□□□□□ -0.65
CSTF1-201ENST00000217109 VSTM4Q8IW00 320 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 CNBD1Q8NA66 436 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 ZFP91Q96JP5 570 aaPredicted RBP11.01□□□□□ -0.65
CSTF1-201ENST00000217109 SRPRBQ9Y5M8 271 aaKnown RBP11.01□□□□□ -0.65
CSTF1-201ENST00000217109 PDE4DQ08499 809 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 LEKR1Q6ZMV7 388 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 RRP36Q96EU6 259 aaKnown RBP11.01□□□□□ -0.65
CSTF1-201ENST00000217109 DYNLL2Q96FJ2 89 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 FER1L4A9Z1Z3 1794 aa11.01□□□□□ -0.65
CSTF1-201ENST00000217109 TBC1D8BQ0IIM8 1120 aa11□□□□□ -0.65
CSTF1-201ENST00000217109 DIXDC1Q155Q3 683 aa11□□□□□ -0.65
CSTF1-201ENST00000217109 SPATA1Q5VX52 437 aa11□□□□□ -0.65
CSTF1-201ENST00000217109 BLIDQ8IZY5 108 aa11□□□□□ -0.65
CSTF1-201ENST00000217109 ZNF710Q8N1W2 664 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms