RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 KIFC2Q96AC6 838 aa15.15■□□□□ 0.02
SRP54-201ENST00000216774 CTAGE1Q96RT6 745 aa15.15■□□□□ 0.02
SRP54-201ENST00000216774 WDR24Q96S15 920 aa15.15■□□□□ 0.02
SRP54-201ENST00000216774 ZSCAN10Q96SZ4 725 aaPredicted RBP15.15■□□□□ 0.02
SRP54-201ENST00000216774 ZNF804BA4D1E1 1349 aa15.15■□□□□ 0.02
SRP54-201ENST00000216774 EXOC5O00471 708 aa15.15■□□□□ 0.02
SRP54-201ENST00000216774 CALM1P0DP23 149 aa15.15■□□□□ 0.02
SRP54-201ENST00000216774 CALM2P0DP24 149 aa15.15■□□□□ 0.02
SRP54-201ENST00000216774 CALM3P0DP25 149 aa15.15■□□□□ 0.02
SRP54-201ENST00000216774 CUL4BQ13620 913 aa15.15■□□□□ 0.02
SRP54-201ENST00000216774 APTXQ7Z2E3 356 aaKnown RBP15.15■□□□□ 0.02
SRP54-201ENST00000216774 CATIPQ7Z7H3 387 aa15.15■□□□□ 0.02
SRP54-201ENST00000216774 GPR161Q8N6U8 529 aaKnown RBP15.15■□□□□ 0.02
SRP54-201ENST00000216774 ENAHQ8N8S7 591 aaPredicted RBP15.15■□□□□ 0.02
SRP54-201ENST00000216774 DHX58Q96C10 678 aa15.15■□□□□ 0.02
SRP54-201ENST00000216774 SHISA4Q96DD7 197 aa15.15■□□□□ 0.02
SRP54-201ENST00000216774 PAGE5Q96GU1 130 aa15.15■□□□□ 0.02
SRP54-201ENST00000216774 CDC5LQ99459 802 aaKnown RBP15.15■□□□□ 0.02
SRP54-201ENST00000216774 BRMS1Q9HCU9 246 aa15.15■□□□□ 0.02
SRP54-201ENST00000216774 CCDC87Q9NVE4 849 aa15.15■□□□□ 0.02
SRP54-201ENST00000216774 SYNRGQ9UMZ2 1314 aa15.15■□□□□ 0.02
SRP54-201ENST00000216774 PHLPP1O60346 1717 aa15.14■□□□□ 0.01
SRP54-201ENST00000216774 DUOX1Q9NRD9 1551 aa15.14■□□□□ 0.01
SRP54-201ENST00000216774 MINDY4BA8MYZ0 360 aa15.14■□□□□ 0.01
SRP54-201ENST00000216774 CCDC175P0C221 793 aa15.14■□□□□ 0.01
SRP54-201ENST00000216774 CHRNDQ07001 517 aa15.14■□□□□ 0.01
SRP54-201ENST00000216774 CDKAL1Q5VV42 579 aa15.14■□□□□ 0.01
SRP54-201ENST00000216774 INTS5Q6P9B9 1019 aaKnown RBP15.14■□□□□ 0.01
SRP54-201ENST00000216774 ADGRA1Q86SQ6 560 aa15.14■□□□□ 0.01
SRP54-201ENST00000216774 MYH6P13533 1939 aa15.14■□□□□ 0.01
SRP54-201ENST00000216774 COL14A1Q05707 1796 aaKnown RBP15.14■□□□□ 0.01
SRP54-201ENST00000216774 A0A087X0B3 334 aa15.14■□□□□ 0.01
SRP54-201ENST00000216774 FAM177A1Q8N128 213 aaPredicted RBP15.14■□□□□ 0.01
SRP54-201ENST00000216774 EPSTI1Q96J88 318 aa15.14■□□□□ 0.01
SRP54-201ENST00000216774 BRIP1Q9BX63 1249 aa15.14■□□□□ 0.01
SRP54-201ENST00000216774 GNL3LQ9NVN8 582 aaKnown RBP15.14■□□□□ 0.01
SRP54-201ENST00000216774 VPS54Q9P1Q0 977 aa15.14■□□□□ 0.01
SRP54-201ENST00000216774 CAMTA2O94983 1202 aa15.13■□□□□ 0.01
SRP54-201ENST00000216774 NTSR2O95665 410 aa15.13■□□□□ 0.01
SRP54-201ENST00000216774 FGRP09769 529 aa15.13■□□□□ 0.01
SRP54-201ENST00000216774 PBX1P40424 430 aa15.13■□□□□ 0.01
SRP54-201ENST00000216774 PPP2R3AQ06190 1150 aa15.13■□□□□ 0.01
SRP54-201ENST00000216774 DPYDQ12882 1025 aa15.13■□□□□ 0.01
SRP54-201ENST00000216774 IFIT1BQ5T764 474 aaKnown RBP15.13■□□□□ 0.01
SRP54-201ENST00000216774 RSRC2Q7L4I2 434 aaKnown RBP15.13■□□□□ 0.01
SRP54-201ENST00000216774 PPFIBP1Q86W92 1011 aa15.13■□□□□ 0.01
SRP54-201ENST00000216774 SDR42E1Q8WUS8 393 aa15.13■□□□□ 0.01
SRP54-201ENST00000216774 SYMPKQ92797 1274 aaKnown RBP15.13■□□□□ 0.01
SRP54-201ENST00000216774 RIOK1Q9BRS2 568 aaKnown RBP15.13■□□□□ 0.01
SRP54-201ENST00000216774 ADD3Q9UEY8 706 aaKnown RBP15.13■□□□□ 0.01
SRP54-201ENST00000216774 DDAH1O94760 285 aa15.13■□□□□ 0.01
SRP54-201ENST00000216774 IQCA1Q86XH1 822 aa15.13■□□□□ 0.01
SRP54-201ENST00000216774 TNFRSF25Q93038 417 aa15.13■□□□□ 0.01
SRP54-201ENST00000216774 RREB1Q92766 1687 aa15.12■□□□□ 0.01
SRP54-201ENST00000216774 FAM205CA6NFA0 338 aa15.12■□□□□ 0.01
SRP54-201ENST00000216774 PLA2G4AP47712 749 aa15.12■□□□□ 0.01
SRP54-201ENST00000216774 FILIP1LQ4L180 1135 aa15.12■□□□□ 0.01
SRP54-201ENST00000216774 IGSF22Q8N9C0 903 aa15.12■□□□□ 0.01
SRP54-201ENST00000216774 RABGGTAQ92696 567 aa15.12■□□□□ 0.01
SRP54-201ENST00000216774 PYM1Q9BRP8 204 aaKnown RBP15.12■□□□□ 0.01
SRP54-201ENST00000216774 CICQ96RK0 1608 aaPredicted RBP15.12■□□□□ 0.01
SRP54-201ENST00000216774 ITIH6Q6UXX5 1313 aa15.12■□□□□ 0.01
SRP54-201ENST00000216774 CD44P16070 742 aaKnown RBP15.12■□□□□ 0.01
SRP54-201ENST00000216774 AFMP43652 599 aa15.12■□□□□ 0.01
SRP54-201ENST00000216774 CRKLP46109 303 aaKnown RBP15.12■□□□□ 0.01
SRP54-201ENST00000216774 TROAPQ12815 778 aa15.12■□□□□ 0.01
SRP54-201ENST00000216774 EARS2Q5JPH6 523 aaKnown RBP15.12■□□□□ 0.01
SRP54-201ENST00000216774 CCDC51Q96ER9 411 aa15.12■□□□□ 0.01
SRP54-201ENST00000216774 ABCF2Q9UG63 623 aa15.12■□□□□ 0.01
SRP54-201ENST00000216774 V9GY48 417 aaPredicted RBP15.12■□□□□ 0.01
SRP54-201ENST00000216774 DLEC1Q9Y238 1755 aa15.11■□□□□ 0.01
SRP54-201ENST00000216774 DOT1LQ8TEK3 1739 aa15.11■□□□□ 0.01
SRP54-201ENST00000216774 PPP1R3GB7ZBB8 358 aa15.11■□□□□ 0.01
SRP54-201ENST00000216774 TEX33O43247 280 aa15.11■□□□□ 0.01
SRP54-201ENST00000216774 ATP2C1P98194 919 aaPredicted RBP15.11■□□□□ 0.01
SRP54-201ENST00000216774 RBL2Q08999 1139 aa15.11■□□□□ 0.01
SRP54-201ENST00000216774 TMTC3Q6ZXV5 915 aa15.11■□□□□ 0.01
SRP54-201ENST00000216774 DESI2Q9BSY9 194 aa15.11■□□□□ 0.01
SRP54-201ENST00000216774 MRPL44Q9H9J2 332 aaKnown RBP15.11■□□□□ 0.01
SRP54-201ENST00000216774 ST7Q9NRC1 585 aa15.11■□□□□ 0.01
SRP54-201ENST00000216774 ADGRG1Q9Y653 693 aa15.11■□□□□ 0.01
SRP54-201ENST00000216774 PLEKHA8P1O95397 391 aa15.1■□□□□ 0.01
SRP54-201ENST00000216774 TRAPPC10P48553 1259 aa15.1■□□□□ 0.01
SRP54-201ENST00000216774 TUBB2AQ13885 445 aa15.1■□□□□ 0.01
SRP54-201ENST00000216774 UBE4AQ14139 1066 aa15.1■□□□□ 0.01
SRP54-201ENST00000216774 TTC38Q5R3I4 469 aa15.1■□□□□ 0.01
SRP54-201ENST00000216774 JAKMIP3Q5VZ66 844 aa15.1■□□□□ 0.01
SRP54-201ENST00000216774 KLHL10Q6JEL2 608 aa15.1■□□□□ 0.01
SRP54-201ENST00000216774 CNGA4Q8IV77 575 aa15.1■□□□□ 0.01
SRP54-201ENST00000216774 GOLGA1Q92805 767 aa15.1■□□□□ 0.01
SRP54-201ENST00000216774 TUBB2BQ9BVA1 445 aa15.1■□□□□ 0.01
SRP54-201ENST00000216774 CACNA1SQ13698 1873 aa15.1■□□□□ 0.01
SRP54-201ENST00000216774 SOWAHDA6NJG2 315 aa15.1■□□□□ 0.01
SRP54-201ENST00000216774 MFAP3LO75121 409 aa15.1■□□□□ 0.01
SRP54-201ENST00000216774 PRDM1O75626 825 aa15.1■□□□□ 0.01
SRP54-201ENST00000216774 FECHP22830 423 aa15.1■□□□□ 0.01
SRP54-201ENST00000216774 NPY5RQ15761 445 aa15.1■□□□□ 0.01
SRP54-201ENST00000216774 CC2D1AQ6P1N0 951 aaPredicted RBP15.1■□□□□ 0.01
SRP54-201ENST00000216774 IQUBQ8NA54 791 aa15.1■□□□□ 0.01
SRP54-201ENST00000216774 CCDC12Q8WUD4 166 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms