RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 NOD1Q9Y239 953 aa21■□□□□ 0.95
MBD3-201ENST00000156825 UGGT1Q9NYU2 1555 aa21■□□□□ 0.95
MBD3-201ENST00000156825 STX10O60499 249 aa21■□□□□ 0.95
MBD3-201ENST00000156825 PDE8BO95263 885 aa21■□□□□ 0.95
MBD3-201ENST00000156825 CYP26C1Q6V0L0 522 aa21■□□□□ 0.95
MBD3-201ENST00000156825 MAP3K15Q6ZN16 1313 aa21■□□□□ 0.95
MBD3-201ENST00000156825 RIOK3O14730 519 aaKnown RBP21■□□□□ 0.95
MBD3-201ENST00000156825 ALDH1B1P30837 517 aa21■□□□□ 0.95
MBD3-201ENST00000156825 ASIC2Q16515 512 aa21■□□□□ 0.95
MBD3-201ENST00000156825 CFAP58Q5T655 872 aa21■□□□□ 0.95
MBD3-201ENST00000156825 ZNF445P59923 1031 aa21■□□□□ 0.95
MBD3-201ENST00000156825 UAP1Q16222 522 aaPredicted RBP21■□□□□ 0.95
MBD3-201ENST00000156825 ZSWIM6Q9HCJ5 1215 aa21■□□□□ 0.95
MBD3-201ENST00000156825 TUBB4AP04350 444 aa20.99■□□□□ 0.95
MBD3-201ENST00000156825 STRN3Q13033 797 aa20.99■□□□□ 0.95
MBD3-201ENST00000156825 TRPC3Q13507 836 aa20.99■□□□□ 0.95
MBD3-201ENST00000156825 NOSTRINQ8IVI9 506 aa20.99■□□□□ 0.95
MBD3-201ENST00000156825 NAPGQ99747 312 aaPredicted RBP20.99■□□□□ 0.95
MBD3-201ENST00000156825 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.99■□□□□ 0.956e-7■■■□□ 17.2
MBD3-201ENST00000156825 MTUS1Q9ULD2 1270 aa20.99■□□□□ 0.95
MBD3-201ENST00000156825 KLRF2D3W0D1 207 aa20.99■□□□□ 0.95
MBD3-201ENST00000156825 ARHGAP44Q17R89 818 aa20.99■□□□□ 0.95
MBD3-201ENST00000156825 ZBED4O75132 1171 aa20.99■□□□□ 0.95
MBD3-201ENST00000156825 FERP16591 822 aa20.99■□□□□ 0.95
MBD3-201ENST00000156825 MAGEA1P43355 309 aa20.99■□□□□ 0.95
MBD3-201ENST00000156825 SEL1L2Q5TEA6 688 aa20.99■□□□□ 0.95
MBD3-201ENST00000156825 ZNF589Q86UQ0 364 aaPredicted RBP20.99■□□□□ 0.95
MBD3-201ENST00000156825 BTDP43251 543 aa20.99■□□□□ 0.95
MBD3-201ENST00000156825 TAF12Q16514 161 aa20.99■□□□□ 0.95
MBD3-201ENST00000156825 RABEP2Q9H5N1 569 aa20.99■□□□□ 0.95
MBD3-201ENST00000156825 PODXL2Q9NZ53 605 aa20.99■□□□□ 0.95
MBD3-201ENST00000156825 ZNF274Q96GC6 653 aaPredicted RBP20.98■□□□□ 0.95
MBD3-201ENST00000156825 CALUO43852 315 aaPredicted RBP20.98■□□□□ 0.95
MBD3-201ENST00000156825 PPP2R5BQ15173 497 aa20.98■□□□□ 0.95
MBD3-201ENST00000156825 PRR16Q569H4 304 aa20.98■□□□□ 0.95
MBD3-201ENST00000156825 USTQ9Y2C2 406 aa20.98■□□□□ 0.95
MBD3-201ENST00000156825 SSX2IPQ9Y2D8 614 aa20.98■□□□□ 0.95
MBD3-201ENST00000156825 HPDP32754 393 aaPredicted RBP20.98■□□□□ 0.95
MBD3-201ENST00000156825 PTPROQ16827 1216 aa20.98■□□□□ 0.95
MBD3-201ENST00000156825 MTRF1LQ9UGC7 380 aaKnown RBP20.98■□□□□ 0.95
MBD3-201ENST00000156825 AGTPBP1Q9UPW5 1226 aa20.98■□□□□ 0.95
MBD3-201ENST00000156825 MSANTD4Q8NCY6 345 aa20.98■□□□□ 0.95
MBD3-201ENST00000156825 PAGR1Q9BTK6 254 aa20.98■□□□□ 0.95
MBD3-201ENST00000156825 COBLO75128 1261 aa20.97■□□□□ 0.95
MBD3-201ENST00000156825 TESPA1A2RU30 521 aaPredicted RBP20.97■□□□□ 0.95
MBD3-201ENST00000156825 EAPPQ56P03 285 aaPredicted RBP20.97■□□□□ 0.95
MBD3-201ENST00000156825 ALAS1P13196 640 aa20.97■□□□□ 0.95
MBD3-201ENST00000156825 PPP1R2P41236 205 aa20.97■□□□□ 0.95
MBD3-201ENST00000156825 CCDC6Q16204 474 aa20.97■□□□□ 0.95
MBD3-201ENST00000156825 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.97■□□□□ 0.95
MBD3-201ENST00000156825 CPLX4Q7Z7G2 160 aa20.97■□□□□ 0.95
MBD3-201ENST00000156825 BLIDQ8IZY5 108 aa20.97■□□□□ 0.95
MBD3-201ENST00000156825 MAK16Q9BXY0 300 aaKnown RBP20.97■□□□□ 0.95
MBD3-201ENST00000156825 COPRSQ9NQ92 184 aa20.97■□□□□ 0.95
MBD3-201ENST00000156825 TXNDC16Q9P2K2 825 aa20.97■□□□□ 0.95
MBD3-201ENST00000156825 SPATA31E1Q6ZUB1 1445 aa20.97■□□□□ 0.95
MBD3-201ENST00000156825 KRT19P08727 400 aa20.97■□□□□ 0.95
MBD3-201ENST00000156825 MNAT1P51948 309 aa20.97■□□□□ 0.95
MBD3-201ENST00000156825 ADALQ6DHV7 355 aa20.97■□□□□ 0.95
MBD3-201ENST00000156825 CTTNBP2NLQ9P2B4 639 aa20.97■□□□□ 0.95
MBD3-201ENST00000156825 CD19P15391 556 aa20.97■□□□□ 0.95
MBD3-201ENST00000156825 CEP63Q96MT8 703 aa20.97■□□□□ 0.95
MBD3-201ENST00000156825 PRR36Q9H6K5 1346 aa20.96■□□□□ 0.95
MBD3-201ENST00000156825 CD2BP2O95400 341 aaKnown RBP20.96■□□□□ 0.95
MBD3-201ENST00000156825 SLC9C1Q4G0N8 1177 aa20.96■□□□□ 0.95
MBD3-201ENST00000156825 TYW1BQ6NUM6 668 aa20.96■□□□□ 0.95
MBD3-201ENST00000156825 RRAGAQ7L523 313 aa20.96■□□□□ 0.95
MBD3-201ENST00000156825 DDX12PQ92771 950 aa20.96■□□□□ 0.95
MBD3-201ENST00000156825 KIAA1468Q9P260 1216 aa20.96■□□□□ 0.95
MBD3-201ENST00000156825 SCRN1Q12765 414 aa20.96■□□□□ 0.95
MBD3-201ENST00000156825 ELF2Q15723 593 aa20.96■□□□□ 0.95
MBD3-201ENST00000156825 KLHL7Q8IXQ5 586 aa20.96■□□□□ 0.95
MBD3-201ENST00000156825 TSGA10Q9BZW7 698 aa20.96■□□□□ 0.95
MBD3-201ENST00000156825 GLT8D2Q9H1C3 349 aa20.96■□□□□ 0.95
MBD3-201ENST00000156825 ROBO2Q9HCK4 1378 aa20.96■□□□□ 0.95
MBD3-201ENST00000156825 PFKFB2O60825 505 aa20.96■□□□□ 0.95
MBD3-201ENST00000156825 GAS7O60861 476 aa20.96■□□□□ 0.95
MBD3-201ENST00000156825 PDIA3P30101 505 aaKnown RBP20.96■□□□□ 0.95
MBD3-201ENST00000156825 KLHL30Q0D2K2 578 aa20.96■□□□□ 0.95
MBD3-201ENST00000156825 RASA3Q14644 834 aa20.96■□□□□ 0.95
MBD3-201ENST00000156825 KIFAP3Q92845 792 aa20.96■□□□□ 0.95
MBD3-201ENST00000156825 GDAP1L1Q96MZ0 367 aa20.96■□□□□ 0.95
MBD3-201ENST00000156825 SF3A3Q12874 501 aaKnown RBP eCLIP20.96■□□□□ 0.95
MBD3-201ENST00000156825 C8orf74Q6P047 294 aa20.96■□□□□ 0.95
MBD3-201ENST00000156825 C2CD5Q86YS7 1000 aa20.96■□□□□ 0.95
MBD3-201ENST00000156825 LZTS2Q9BRK4 669 aa20.96■□□□□ 0.95
MBD3-201ENST00000156825 GPHNQ9NQX3 736 aaPredicted RBP20.96■□□□□ 0.95
MBD3-201ENST00000156825 MYOM2P54296 1465 aa20.96■□□□□ 0.95
MBD3-201ENST00000156825 CEP104O60308 925 aa20.95■□□□□ 0.94
MBD3-201ENST00000156825 CYP21A2P08686 494 aa20.95■□□□□ 0.94
MBD3-201ENST00000156825 SPICE1Q8N0Z3 855 aa20.95■□□□□ 0.94
MBD3-201ENST00000156825 TRIM6Q9C030 488 aaPredicted RBP20.95■□□□□ 0.94
MBD3-201ENST00000156825 PSTPIP2Q9H939 334 aa20.95■□□□□ 0.94
MBD3-201ENST00000156825 A0A087WWV3 80 aa20.95■□□□□ 0.94
MBD3-201ENST00000156825 LSG1Q9H089 658 aaKnown RBP20.95■□□□□ 0.94
MBD3-201ENST00000156825 DYNLL1P63167 89 aaKnown RBP20.95■□□□□ 0.94
MBD3-201ENST00000156825 TSC1Q92574 1164 aa20.95■□□□□ 0.94
MBD3-201ENST00000156825 DESI2Q9BSY9 194 aa20.95■□□□□ 0.94
MBD3-201ENST00000156825 AZI2Q9H6S1 392 aa20.95■□□□□ 0.94
MBD3-201ENST00000156825 CLIC4Q9Y696 253 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms