RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 CCDC160A6NGH7 325 aa13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 BAG3O95817 575 aa13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 FGAP02671 866 aa13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 RPSAP08865 295 aaKnown RBP13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 ADD1P35611 737 aaKnown RBP13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 CAPZA3Q96KX2 299 aa13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 ARMT1Q9H993 441 aa13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 GOPCQ9HD26 462 aa13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 RFC4P35249 363 aa13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 PCK1P35558 622 aa13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 AMPD3Q01432 767 aa13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 TMEM266Q2M3C6 531 aa13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 CALML4Q96GE6 196 aa13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 TRIM66O15016 1216 aa13.62□□□□□ -0.23
TSPAN9-201ENST00000011898 APBA3O96018 575 aa13.62□□□□□ -0.23
TSPAN9-201ENST00000011898 IL6STP40189 918 aaPredicted RBP13.62□□□□□ -0.23
TSPAN9-201ENST00000011898 GIGYF2Q6Y7W6 1299 aaKnown RBP13.62□□□□□ -0.23
TSPAN9-201ENST00000011898 GDAP1L1Q96MZ0 367 aa13.62□□□□□ -0.23
TSPAN9-201ENST00000011898 FGFR1OPO95684 399 aaKnown RBP13.62□□□□□ -0.23
TSPAN9-201ENST00000011898 ARHGAP25P42331 645 aa13.62□□□□□ -0.23
TSPAN9-201ENST00000011898 CRKLP46109 303 aaKnown RBP13.62□□□□□ -0.23
TSPAN9-201ENST00000011898 NLRP12P59046 1061 aa13.62□□□□□ -0.23
TSPAN9-201ENST00000011898 PLEKHA4Q9H4M7 779 aa13.62□□□□□ -0.23
TSPAN9-201ENST00000011898 IMPACTQ9P2X3 320 aa13.62□□□□□ -0.23
TSPAN9-201ENST00000011898 PCDHA7Q9UN72 937 aa13.62□□□□□ -0.23
TSPAN9-201ENST00000011898 CYP2E1P05181 493 aaPredicted RBP13.62□□□□□ -0.23
TSPAN9-201ENST00000011898 TUBBP07437 444 aa13.62□□□□□ -0.23
TSPAN9-201ENST00000011898 LDHCP07864 332 aa13.62□□□□□ -0.23
TSPAN9-201ENST00000011898 CYP19A1P11511 503 aaPredicted RBP13.62□□□□□ -0.23
TSPAN9-201ENST00000011898 PDIA3P30101 505 aaKnown RBP13.62□□□□□ -0.23
TSPAN9-201ENST00000011898 NEDD9Q14511 834 aa13.62□□□□□ -0.23
TSPAN9-201ENST00000011898 SYCP1Q15431 976 aa13.62□□□□□ -0.23
TSPAN9-201ENST00000011898 BCAS4Q8TDM0 211 aa13.62□□□□□ -0.23
TSPAN9-201ENST00000011898 N4BP2L2Q92802 583 aaPredicted RBP13.62□□□□□ -0.23
TSPAN9-201ENST00000011898 RTCBQ9Y3I0 505 aaKnown RBP13.62□□□□□ -0.23
TSPAN9-201ENST00000011898 DOT1LQ8TEK3 1739 aa13.61□□□□□ -0.23
TSPAN9-201ENST00000011898 CCT5P48643 541 aa13.61□□□□□ -0.23
TSPAN9-201ENST00000011898 TCIRG1Q13488 830 aa13.61□□□□□ -0.23
TSPAN9-201ENST00000011898 MMS22LQ6ZRQ5 1243 aa13.61□□□□□ -0.23
TSPAN9-201ENST00000011898 IQUBQ8NA54 791 aa13.61□□□□□ -0.23
TSPAN9-201ENST00000011898 TSG101Q99816 390 aa13.61□□□□□ -0.23
TSPAN9-201ENST00000011898 NFE2L3Q9Y4A8 694 aa13.61□□□□□ -0.23
TSPAN9-201ENST00000011898 PSMA7O14818 248 aa13.61□□□□□ -0.23
TSPAN9-201ENST00000011898 AKR1B10O60218 316 aa13.61□□□□□ -0.23
TSPAN9-201ENST00000011898 KRT2P35908 639 aa13.61□□□□□ -0.23
TSPAN9-201ENST00000011898 PUM3Q15397 648 aaKnown RBP13.61□□□□□ -0.23
TSPAN9-201ENST00000011898 ZNF532Q9HCE3 1301 aa13.61□□□□□ -0.23
TSPAN9-201ENST00000011898 VWA3AA6NCI4 1184 aa13.61□□□□□ -0.23
TSPAN9-201ENST00000011898 CUTAO60888 179 aa13.61□□□□□ -0.23
TSPAN9-201ENST00000011898 MAGEA9P43362 315 aa13.61□□□□□ -0.23
TSPAN9-201ENST00000011898 UBE4AQ14139 1066 aa13.61□□□□□ -0.23
TSPAN9-201ENST00000011898 PDLIM2Q96JY6 352 aa13.61□□□□□ -0.23
TSPAN9-201ENST00000011898 TACO1Q9BSH4 297 aaKnown RBP13.61□□□□□ -0.23
TSPAN9-201ENST00000011898 SH3TC1Q8TE82 1336 aa13.61□□□□□ -0.23
TSPAN9-201ENST00000011898 DEXIO95424 95 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 MCM7P33993 719 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 ZNF76P36508 570 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 GYS2P54840 703 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 NBPF5PQ86XG9 351 aaPredicted RBP13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 EFCAB13Q8IY85 973 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 FBXO18Q8NFZ0 1043 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 ZBTB1Q9Y2K1 713 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 ADCY9O60503 1353 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 A0A087WUV0 522 aaPredicted RBP13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 PRDM1O75626 825 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 PTPN12Q05209 780 aaKnown RBP13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 E2F5Q15329 346 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 ZNF174Q15697 407 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 SPTY2D1Q68D10 685 aaPredicted RBP13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 NLRP3Q96P20 1036 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 FTOQ9C0B1 505 aaKnown RBP eCLIP13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 PDE11AQ9HCR9 933 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 GNPATO15228 680 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 CALM1P0DP23 149 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 CALM2P0DP24 149 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 CALM3P0DP25 149 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 CKAP4Q07065 602 aaKnown RBP13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 CCDC178Q5BJE1 867 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 HEATR3Q7Z4Q2 680 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 HOMEZQ8IX15 550 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 WDR66Q8TBY9 1149 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 PIK3R5Q8WYR1 880 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 MRFAP1L1Q96HT8 127 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 SEPT11Q9NVA2 429 aaKnown RBP13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 FEZ2Q9UHY8 353 aaPredicted RBP13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 KCNJ14Q9UNX9 436 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 VIRMAQ69YN4 1812 aaKnown RBP13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 PDE8AO60658 829 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 TSPY3P0CV98 308 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 TSPY8P0CW00 308 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 PFKFB1P16118 471 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 CCDC96Q2M329 555 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 LRRC8AQ8IWT6 810 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 ANKS4BQ8N8V4 417 aa13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 NSUN7Q8NE18 718 aaKnown RBP13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 NAA15Q9BXJ9 866 aaKnown RBP13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 PUS3Q9BZE2 481 aaKnown RBP13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 SUDS3Q9H7L9 328 aaPredicted RBP13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 V9GY48 417 aaPredicted RBP13.6□□□□□ -0.23
TSPAN9-201ENST00000011898 A0A087WWV3 80 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 225.3 ms