RNA–Protein interactions for RNA: ENSMUST00000185633.6

Xrn1-202, Transcript of 5'-3' exoribonuclease 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Xrn1, Length 10,256 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1-202ENSMUST00000185633 Pard3Q99NH2 1333 aa4.44□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Numa1E9Q7G0 2094 aaKnown RBP4.44□□□□□ -1.7
Xrn1-202ENSMUST00000185633 NpcdF8VQB8 469 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Ccdc157Q5SPX1 718 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Cyp2d12Q8BVD2 504 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Krt23Q99PS0 422 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Map7d3A2AEY4 876 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Nfkbil1O88995 381 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Patl1Q3TC46 770 aaKnown RBP4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Tbc1d2bQ3U0J8 965 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 MmeQ61391 750 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Ankrd6Q69ZU8 712 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Ap1s3Q7TN05 154 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Rab11fip4Q8BQP8 635 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 ZwintQ9CQU5 252 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Ppil4Q9CXG3 492 aaKnown RBP4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Deaf1Q9Z1T5 566 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Gsta4P24472 222 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Lig3P97386 1015 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Atp11aP98197 1187 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Smg7Q5RJH6 1138 aaKnown RBP4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Casp8O89110 480 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Atp6v0a2P15920 856 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Ppip5k2Q6ZQB6 1129 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Ano2Q8CFW1 1002 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Pde6cQ91ZQ1 861 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Ubxn1Q922Y1 297 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Cap2Q9CYT6 476 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 PigbQ9JJQ0 542 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Zswim8Q3UHH1 1832 aaKnown RBP4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Ankrd12G5E893 2041 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Kcna3P16390 528 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 1810065E05RikQ5NC41 235 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Clec16aQ80U30 1036 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Cabs1Q8C633 391 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Gimap6Q8K349 305 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Anapc4Q91W96 807 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 CacybpQ9CXW3 229 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 TrdnE9Q9K5 693 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Ppp1r15aP17564 657 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Psmd7P26516 321 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Lmntd2Q0VET5 664 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Nol8Q3UHX0 1147 aaKnown RBP4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Cnga2Q62398 664 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Ankib1Q6ZPS6 1085 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Stk3Q9JI10 497 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Gkap1Q9JMB0 366 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Irx4Q9QY61 515 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Atp1a4Q9WV27 1032 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 LyarQ08288 388 aaKnown RBP4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Ccdc125Q5U465 500 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Krt72Q6IME9 520 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 NostrinQ6WKZ7 506 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Pms1Q8K119 917 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Rabep2Q91WG2 554 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Tsnaxip1Q99P25 704 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 4931400O07RikQ9D4M5 137 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Egfl6Q9JJZ5 550 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Phldb3E9QAF4 648 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 NeblQ0II04 452 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Gzf1Q4VBD9 706 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Mum1Q6DID5 682 aa4.43□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Tubb1A2AQ07 451 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Hspa8P63017 646 aaKnown RBP4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Ncoa4Q5U4H9 625 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Ppp1r1bQ60829 194 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Sh3gl2Q62420 352 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Tshz2Q68FE9 1030 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Hook2Q7TMK6 716 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Mtmr3Q8K296 1196 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Trim12aQ99PQ1 284 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Syce1Q9D495 329 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Gstt4Q9D4P7 240 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Ripk4Q9ERK0 786 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Ppfia4B8QI36 1187 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Gimap9G3X987 291 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Sesn1P58006 492 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Babam1Q3UI43 333 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Rbm26Q6NZN0 1012 aaKnown RBP4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Trak2Q6P9N8 913 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Drc3Q9D5E4 523 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Zfpm1O35615 995 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Eef1bO70251 225 aaKnown RBP4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 SfswapQ3USH5 945 aaKnown RBP4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 RasefQ5RI75 627 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Defa-rs10Q64263 91 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Baiap2l1Q9DBJ3 514 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Ppp1r12aQ9DBR7 1029 aaKnown RBP4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Bicdl1A0JNT9 577 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Pdzd8B9EJ80 1147 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Tm6sf1P58749 370 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Ublcp1Q8BGR9 318 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Cep55Q8BT07 462 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Nkiras1Q8CEC5 192 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Trim12cD3Z3L3 497 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Zfp213E9QAW0 468 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Lire1P11260 357 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Rnf40Q3U319 1001 aa4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Rbm27Q5SFM8 1060 aaKnown RBP4.42□□□□□ -1.7
Xrn1-202ENSMUST00000185633 Mkrn3Q60764 544 aa4.42□□□□□ -1.7
Retrieved 100 of 22,080 RNA–protein pairs in 67.5 ms