RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 Myl6bQ8CI43 207 aa31.77■■■□□ 2.68
Ldb1-208ENSMUST00000185355 Dynll2Q9D0M5 89 aa31.77■■■□□ 2.68
Ldb1-208ENSMUST00000185355 Cdc27A2A6Q5 825 aa31.76■■■□□ 2.68
Ldb1-208ENSMUST00000185355 Slurp2P0DP59 97 aa31.76■■■□□ 2.68
Ldb1-208ENSMUST00000185355 Atp6v0a2P15920 856 aa31.76■■■□□ 2.68
Ldb1-208ENSMUST00000185355 Abcf1Q6P542 837 aaKnown RBP31.76■■■□□ 2.68
Ldb1-208ENSMUST00000185355 Rbm42Q91V81 474 aaKnown RBP31.76■■■□□ 2.68
Ldb1-208ENSMUST00000185355 Baiap2l1Q9DBJ3 514 aa31.76■■■□□ 2.68
Ldb1-208ENSMUST00000185355 Rai14Q9EP71 979 aaKnown RBP31.76■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Ms4a1P19437 291 aa31.75■■■□□ 2.67
Ldb1-208ENSMUST00000185355 GnaqP21279 359 aa31.75■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Hmgb2P30681 210 aaKnown RBP31.75■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Mars2Q499X9 586 aaKnown RBP31.75■■■□□ 2.67
Ldb1-208ENSMUST00000185355 AsnsQ61024 561 aa31.75■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Cep85Q8BMK0 761 aa31.75■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Wnt7aP24383 349 aa31.74■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Sdc2P43407 202 aa31.74■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Pip5kl1Q6U7H8 395 aa31.74■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Myo1hQ9D6A1 958 aa31.74■■■□□ 2.67
Ldb1-208ENSMUST00000185355 AllcQ9JHX6 414 aa31.74■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Usp53P15975 1069 aa31.74■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Ptpn12P35831 775 aa31.74■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Gpatch11Q3UFS4 262 aa31.74■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Cep128Q8BI22 1102 aa31.74■■■□□ 2.67
Ldb1-208ENSMUST00000185355 HibadhQ99L13 335 aaKnown RBP31.74■■■□□ 2.67
Ldb1-208ENSMUST00000185355 C87499Q3UX49 493 aa31.73■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Cdc37Q61081 379 aa31.73■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Serpina10Q8R121 448 aa31.73■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Mad2l2Q9D752 211 aa31.73■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Gm21969J3QJZ1 289 aa31.72■■■□□ 2.67
Ldb1-208ENSMUST00000185355 MsnP26041 577 aaKnown RBP31.72■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Prpf38aQ4FK66 312 aaKnown RBP31.72■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Clip2Q9Z0H8 1047 aa31.72■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Enox1Q8BHR2 643 aaKnown RBP31.72■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Akt1s1Q9D1F4 257 aa31.72■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Myh7bA2AQP0 1941 aa31.72■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Nod2Q8K3Z0 1020 aa31.71■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Nup188Q6ZQH8 1759 aa31.71■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Zmym2Q9CU65 1376 aa31.71■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Tex13cD3YU32 604 aa31.71■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Brms1Q99N20 246 aa31.71■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Tdo2P48776 406 aa31.7■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Hdac4Q6NZM9 1076 aa31.7■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Pramel6Q810Y9 485 aa31.7■■■□□ 2.67
Ldb1-208ENSMUST00000185355 Ltbp2O08999 1813 aa31.7■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Prdm11A2AGX3 565 aa31.69■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Panx2Q6IMP4 677 aa31.69■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Slc44a4Q91VA1 707 aa31.69■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Hip1rQ9JKY5 1068 aa31.69■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Magi2Q9WVQ1 1275 aa31.69■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Tsc2Q61037 1814 aa31.69■■■□□ 2.66
Ldb1-208ENSMUST00000185355 UncxO08934 530 aa31.69■■■□□ 2.66
Ldb1-208ENSMUST00000185355 DnttP09838 530 aa31.69■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Gjb4Q02738 266 aa31.69■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Best3Q6H1V1 669 aa31.69■■■□□ 2.66
Ldb1-208ENSMUST00000185355 WdpcpQ8C456 722 aa31.69■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Sumf1Q8R0F3 372 aa31.69■■■□□ 2.66
Ldb1-208ENSMUST00000185355 CluhQ5SW19 1315 aa31.69■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Tbc1d2B1AVH7 922 aa31.68■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Jakmip2D3YXK0 820 aa31.68■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Znf568E9PYI1 671 aa31.68■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Stag2O35638 1231 aa31.68■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Cep135Q6P5D4 1140 aa31.68■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Asnsd1Q8BFS9 627 aa31.68■■■□□ 2.66
Ldb1-208ENSMUST00000185355 A0A0U1RNP2 1173 aa31.68■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Clic6Q8BHB9 596 aa31.68■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Stac3Q8BZ71 360 aa31.68■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Apobec3Q99J72 440 aaKnown RBP31.68■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Ccdc88aQ5SNZ0 1873 aa31.67■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Myh8P13542 1937 aa31.67■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Cbx6Q9DBY5 414 aa31.67■■■□□ 2.66
Ldb1-208ENSMUST00000185355 GmnnO88513 206 aa31.66■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Myo19Q5SV80 963 aa31.66■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Lzts2Q91YU6 671 aa31.66■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Ppef2O35385 757 aa31.66■■■□□ 2.66
Ldb1-208ENSMUST00000185355 CtifQ6PEE2 600 aaKnown RBP31.66■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Ankk1Q8BZ25 745 aa31.66■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Klhl30Q8C3F7 581 aa31.66■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Lonrf3Q9D4H7 753 aa31.66■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Tmem47Q9JJG6 181 aa31.66■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Nek1P51954 1203 aa31.65■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Anks1bQ8BIZ1 1259 aa31.65■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Ubap1lG3UW59 384 aa31.64■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Mns1Q61884 491 aa31.64■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Gga3Q8BMI3 718 aa31.64■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Nat10Q8K224 1024 aaKnown RBP31.64■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Btn2a2A4QPC6 514 aa31.64■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Gucy1a2F8VQK3 730 aa31.64■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Adam7O35227 789 aa31.64■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Pla2g4bP0C871 782 aa31.64■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Cdh15P33146 784 aa31.64■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Nxf2Q4ZGD8 691 aa31.64■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Hps4Q99KG7 671 aa31.64■■■□□ 2.66
Ldb1-208ENSMUST00000185355 Cd2apQ9JLQ0 637 aa31.64■■■□□ 2.66
Ldb1-208ENSMUST00000185355 MeiocA2AG06 965 aa31.63■■■□□ 2.65
Ldb1-208ENSMUST00000185355 EgfrQ01279 1210 aa31.63■■■□□ 2.65
Ldb1-208ENSMUST00000185355 VrtnQ3SYK4 740 aa31.63■■■□□ 2.65
Ldb1-208ENSMUST00000185355 Armc2Q3URY6 854 aa31.63■■■□□ 2.65
Ldb1-208ENSMUST00000185355 Krt39Q6IFX4 482 aa31.63■■■□□ 2.65
Ldb1-208ENSMUST00000185355 Sass6Q80UK7 654 aa31.63■■■□□ 2.65
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms