RNA–Protein interactions for RNA: ENSMUST00000113335.3

Ubr2-201, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ubr2, Length 5,691 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-201ENSMUST00000113335 InsrrQ9WTL4 1300 aa17.27■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Parp2O88554 559 aa17.26■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Miga2Q8BK03 593 aa17.26■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Etf1Q8BWY3 437 aaKnown RBP17.26■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Prrc2bQ7TPM1 1486 aaKnown RBP17.26■□□□□ 0.35
Ubr2-201ENSMUST00000113335 EnahQ03173 802 aa17.26■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Lrriq3Q14DL3 633 aa17.26■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Gm5168Q4KL04 211 aa17.26■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Crybg3Q80W49 1005 aa17.26■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Mis12Q9CY25 206 aa17.26■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Pik3caP42337 1068 aa17.26■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Atp8a2P98200 1148 aa17.26■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Clasp2Q8BRT1 1286 aaKnown RBP17.26■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Lonp1Q8CGK3 949 aaKnown RBP17.26■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Taf12Q8VE65 161 aa17.26■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Serpinb12Q9D7P9 423 aa17.26■□□□□ 0.35
Ubr2-201ENSMUST00000113335 AW822073A0A0N4SUK1 652 aa17.26■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Ppp2r5cQ60996 524 aa17.26■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Vps37bQ8R0J7 285 aa17.25■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Nxf1Q99JX7 618 aaKnown RBP17.25■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Phkg2Q9DB30 406 aa17.25■□□□□ 0.35
Ubr2-201ENSMUST00000113335 PsdQ5DTT2 1024 aa17.25■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Ovgp1Q62010 721 aa17.25■□□□□ 0.35
Ubr2-201ENSMUST00000113335 ChmQ9QXG2 665 aa17.25■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Zscan18E9PUD6 809 aa17.25■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Eef1bO70251 225 aaKnown RBP17.25■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Znf667Q2TL60 609 aa17.25■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Cnksr2Q80YA9 1032 aa17.25■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Armcx3Q8BHS6 379 aa17.25■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Cpb1B2RS76 415 aa17.25■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Large2Q5XPT3 690 aa17.25■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Actr5Q80US4 605 aaKnown RBP17.25■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Zfp174B9EJW5 407 aa17.25■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Pde11aP0C1Q2 933 aa17.25■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Armc2Q3URY6 854 aa17.25■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Msl1Q6PDM1 616 aa17.25■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Stac3Q8BZ71 360 aa17.25■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Lzts2Q91YU6 671 aa17.25■□□□□ 0.35
Ubr2-201ENSMUST00000113335 1700020D05RikQ99PB1 294 aa17.25■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Cpsf2O35218 782 aaKnown RBP17.24■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Ttc27Q8CD92 847 aa17.24■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Slc12a2P55012 1205 aa17.24■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Gpcpd1Q8C0L9 675 aa17.24■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Saal1Q9D2C2 474 aa17.24■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Rsph3bQ9DA80 389 aa17.24■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Taf4bG5E8Z2 855 aa17.24■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Prl3d1P18121 224 aa17.24■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Nlrx1Q3TL44 975 aa17.24■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Gm5169Q5M8P2 212 aa17.24■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Adam1aQ60813 791 aa17.24■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Caps2Q8BUG5 550 aa17.24■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Osbpl1aQ91XL9 950 aa17.24■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Nrbp1Q99J45 535 aa17.24■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Gkap1Q9JMB0 366 aa17.24■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Atp6v1aP50516 617 aaKnown RBP17.23■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Csrnp1P59054 583 aa17.23■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Slc10a4Q3UEZ8 437 aa17.23■□□□□ 0.35
Ubr2-201ENSMUST00000113335 HarsQ61035 509 aa17.23■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Klhl40Q9D783 621 aa17.23■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Rps6ka2Q9WUT3 733 aa17.23■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Tex14Q7M6U3 1450 aa17.23■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Gdap1O88741 358 aa17.23■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Pkp1P97350 728 aaKnown RBP17.23■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Acot10Q32MW3 439 aa17.23■□□□□ 0.35
Ubr2-201ENSMUST00000113335 WaplQ65Z40 1200 aaKnown RBP17.23■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Gbp9Q8BTS3 619 aa17.23■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Clic4Q9QYB1 253 aa17.23■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Pard3Q99NH2 1333 aa17.23■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Card6E9PWH2 1175 aa17.23■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Krt18P05784 423 aa17.23■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Ano9P86044 747 aa17.23■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Rcn2Q8BP92 320 aa17.23■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Tmco4Q91WU4 631 aa17.23■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Nlgn1Q99K10 843 aa17.23■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Gm6121L7MUF1 212 aa17.23■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Pdzd9Q9D9M4 266 aa17.23■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Xrcc6P23475 608 aa17.22■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Sem1P60897 70 aa17.22■□□□□ 0.35
Ubr2-201ENSMUST00000113335 IkbkgO88522 412 aa17.22■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Lig3P97386 1015 aa17.22■□□□□ 0.35
Ubr2-201ENSMUST00000113335 WizO88286 1684 aaKnown RBP17.22■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Ift81O35594 676 aa17.22■□□□□ 0.35
Ubr2-201ENSMUST00000113335 CacybpQ9CXW3 229 aa17.22■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Gm4297D3YWB7 211 aa17.22■□□□□ 0.35
Ubr2-201ENSMUST00000113335 1700122O11RikJ3QPW6 241 aa17.22■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Clic6Q8BHB9 596 aa17.22■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Taco1Q8K0Z7 294 aaKnown RBP17.22■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Gipc1Q9Z0G0 333 aa17.22■□□□□ 0.35
Ubr2-201ENSMUST00000113335 1700029H14RikE9PY36 240 aa17.21■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Cnbd1B1AWM0 430 aa17.21■□□□□ 0.35
Ubr2-201ENSMUST00000113335 1700113H08RikE9Q9Q5 327 aa17.21■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Adcy8P97490 1249 aa17.21■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Krt14Q61781 484 aa17.21■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Taf5lQ91WQ5 589 aa17.21■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Surf6P70279 355 aaKnown RBP17.21■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Ginm1Q91WR6 327 aa17.21■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Zcchc8Q9CYA6 709 aaKnown RBP17.21■□□□□ 0.35
Ubr2-201ENSMUST00000113335 DohhA0A1Y7VJ29 135 aa17.21■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Eif4a1P60843 406 aaKnown RBP17.21■□□□□ 0.35
Ubr2-201ENSMUST00000113335 Swap70Q6A028 585 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 33.8 ms