RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Zscan25B2RX31 543 aa20.15■□□□□ 0.82
Trim71-201ENSMUST00000111816 Zfp94E9Q6Y4 486 aa20.15■□□□□ 0.82
Trim71-201ENSMUST00000111816 CopeO89079 308 aa20.15■□□□□ 0.82
Trim71-201ENSMUST00000111816 Myh6Q02566 1938 aaKnown RBP20.15■□□□□ 0.82
Trim71-201ENSMUST00000111816 BrapQ99MP8 591 aa20.15■□□□□ 0.82
Trim71-201ENSMUST00000111816 RabggtaQ9JHK4 567 aa20.15■□□□□ 0.82
Trim71-201ENSMUST00000111816 Nlrp4aQ8BU40 982 aa20.15■□□□□ 0.82
Trim71-201ENSMUST00000111816 LmnaP48678 665 aaKnown RBP20.15■□□□□ 0.82
Trim71-201ENSMUST00000111816 Acot11Q8VHQ9 594 aa20.15■□□□□ 0.82
Trim71-201ENSMUST00000111816 Rrp1P56183 494 aaKnown RBP20.14■□□□□ 0.82
Trim71-201ENSMUST00000111816 Fam50bQ9WTJ8 334 aa20.14■□□□□ 0.82
Trim71-201ENSMUST00000111816 Exoc5Q3TPX4 708 aa20.14■□□□□ 0.82
Trim71-201ENSMUST00000111816 Pomgnt1Q91X88 660 aa20.14■□□□□ 0.82
Trim71-201ENSMUST00000111816 Ppp1r12aQ9DBR7 1029 aaKnown RBP20.14■□□□□ 0.82
Trim71-201ENSMUST00000111816 Tsc1Q9EP53 1161 aa20.14■□□□□ 0.82
Trim71-201ENSMUST00000111816 Supt6hQ62383 1726 aaKnown RBP20.14■□□□□ 0.82
Trim71-201ENSMUST00000111816 Prdm1Q60636 856 aa20.14■□□□□ 0.81
Trim71-201ENSMUST00000111816 Stmn3O70166 180 aa20.14■□□□□ 0.81
Trim71-201ENSMUST00000111816 Lsg1Q3UM18 644 aaKnown RBP20.14■□□□□ 0.81
Trim71-201ENSMUST00000111816 Hexim1Q8R409 356 aaKnown RBP20.14■□□□□ 0.81
Trim71-201ENSMUST00000111816 Wdr36Q3TAQ9 899 aaKnown RBP20.14■□□□□ 0.81
Trim71-201ENSMUST00000111816 Gm5624F6ZZG8 207 aa20.14■□□□□ 0.81
Trim71-201ENSMUST00000111816 Pdcd2P46718 343 aa20.14■□□□□ 0.81
Trim71-201ENSMUST00000111816 Enox1Q8BHR2 643 aaKnown RBP20.14■□□□□ 0.81
Trim71-201ENSMUST00000111816 Serpinb6eI7HJI3 429 aa20.14■□□□□ 0.81
Trim71-201ENSMUST00000111816 Abcb4P21440 1276 aa20.14■□□□□ 0.81
Trim71-201ENSMUST00000111816 Mtx1P47802 317 aa20.14■□□□□ 0.81
Trim71-201ENSMUST00000111816 Ccdc189Q6NZQ0 333 aa20.14■□□□□ 0.81
Trim71-201ENSMUST00000111816 Pde4dipQ80YT7 2224 aa20.14■□□□□ 0.81
Trim71-201ENSMUST00000111816 Akap17bA2A3V1 959 aa20.13■□□□□ 0.81
Trim71-201ENSMUST00000111816 Znf76Q8BMU0 568 aa20.13■□□□□ 0.81
Trim71-201ENSMUST00000111816 Stx19Q8R1Q0 292 aa20.13■□□□□ 0.81
Trim71-201ENSMUST00000111816 Fbln2P37889 1221 aa20.13■□□□□ 0.81
Trim71-201ENSMUST00000111816 Trpc6Q61143 930 aa20.13■□□□□ 0.81
Trim71-201ENSMUST00000111816 Rexo1Q7TT28 1213 aa20.13■□□□□ 0.81
Trim71-201ENSMUST00000111816 Gm10354K7N6A0 256 aa20.13■□□□□ 0.81
Trim71-201ENSMUST00000111816 ScgnQ91WD9 276 aa20.13■□□□□ 0.81
Trim71-201ENSMUST00000111816 SmtnQ921U8 923 aa20.13■□□□□ 0.81
Trim71-201ENSMUST00000111816 Prr29B1ARI9 187 aa20.13■□□□□ 0.81
Trim71-201ENSMUST00000111816 Zscan12Q9Z1D7 501 aa20.13■□□□□ 0.81
Trim71-201ENSMUST00000111816 FanccP50652 591 aa20.13■□□□□ 0.81
Trim71-201ENSMUST00000111816 Bag5Q8CI32 447 aa20.13■□□□□ 0.81
Trim71-201ENSMUST00000111816 Strn3Q9ERG2 796 aa20.13■□□□□ 0.81
Trim71-201ENSMUST00000111816 Ankle2Q6P1H6 964 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 Klhl29Q80T74 875 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 Plekhm2Q80TQ5 1018 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 Zfp449Q8CB76 518 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 Mrfap1Q9CQL7 125 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 Trim12cD3Z3L3 497 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 1700011I03RikE9PYL8 271 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 Stx2Q00262 289 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 Krt12Q64291 487 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 Cd2bp2Q9CWK3 342 aaKnown RBP20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 Gm28961A0A087WPA5 222 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 Gm21858A0A087WQ24 222 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 Slf2Q6P9P0 1278 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 Mrps9Q9D7N3 390 aaKnown RBP20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 Pak1O88643 545 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 Dab1P97318 588 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 Syne3Q4FZC9 975 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 Ppp4r3aQ6P2K6 820 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 St5Q924W7 1134 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 Dach2Q925Q8 634 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 Aox1O54754 1333 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 Slc3a2P10852 526 aaKnown RBP20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 Psmc1P62192 440 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 Erich5Q8K0S2 362 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 Stx17Q9D0I4 301 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 1700018F24RikB2RW27 314 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 Svs3bQ8BZH8 265 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 4932411N23RikQ8C0S0 470 aa20.12■□□□□ 0.81
Trim71-201ENSMUST00000111816 SybuQ8BHS8 665 aa20.11■□□□□ 0.81
Trim71-201ENSMUST00000111816 Gon4lQ9DB00 2260 aa20.11■□□□□ 0.81
Trim71-201ENSMUST00000111816 Cul4bA2A432 970 aaKnown RBP20.11■□□□□ 0.81
Trim71-201ENSMUST00000111816 Ccdc80Q8R2G6 949 aa20.11■□□□□ 0.81
Trim71-201ENSMUST00000111816 Kat6aQ8BZ21 2003 aa20.11■□□□□ 0.81
Trim71-201ENSMUST00000111816 Rbbp8nlA2ABX0 614 aa20.11■□□□□ 0.81
Trim71-201ENSMUST00000111816 Myo10F8VQB6 2062 aa20.11■□□□□ 0.81
Trim71-201ENSMUST00000111816 Atp8b1Q148W0 1251 aa20.11■□□□□ 0.81
Trim71-201ENSMUST00000111816 OtulinQ3UCV8 352 aa20.11■□□□□ 0.81
Trim71-201ENSMUST00000111816 Trim21Q62191 470 aa20.11■□□□□ 0.81
Trim71-201ENSMUST00000111816 Raph1F2Z3U3 1266 aa20.11■□□□□ 0.81
Trim71-201ENSMUST00000111816 Ddx55Q6ZPL9 600 aaKnown RBP20.11■□□□□ 0.81
Trim71-201ENSMUST00000111816 Actn3O88990 900 aaKnown RBP20.11■□□□□ 0.81
Trim71-201ENSMUST00000111816 Nsun2Q1HFZ0 757 aaKnown RBP20.11■□□□□ 0.81
Trim71-201ENSMUST00000111816 Atg3Q9CPX6 314 aa20.1■□□□□ 0.81
Trim71-201ENSMUST00000111816 Wars2Q9CYK1 360 aa20.1■□□□□ 0.81
Trim71-201ENSMUST00000111816 Gm4297D3YWB7 211 aa20.1■□□□□ 0.81
Trim71-201ENSMUST00000111816 Myd88P22366 296 aa20.1■□□□□ 0.81
Trim71-201ENSMUST00000111816 Coq7P97478 217 aa20.1■□□□□ 0.81
Trim71-201ENSMUST00000111816 Gm10488Q4KL05 212 aa20.1■□□□□ 0.81
Trim71-201ENSMUST00000111816 Ppp1r15aP17564 657 aa20.1■□□□□ 0.81
Trim71-201ENSMUST00000111816 Xrcc6P23475 608 aa20.1■□□□□ 0.81
Trim71-201ENSMUST00000111816 Stkld1Q80YS9 662 aa20.1■□□□□ 0.81
Trim71-201ENSMUST00000111816 Spag17Q5S003 2320 aa20.1■□□□□ 0.81
Trim71-201ENSMUST00000111816 Eif3dO70194 548 aaKnown RBP20.1■□□□□ 0.81
Trim71-201ENSMUST00000111816 Stx1bP61264 288 aa20.1■□□□□ 0.81
Trim71-201ENSMUST00000111816 Zbtb3Q91X45 518 aa20.1■□□□□ 0.81
Trim71-201ENSMUST00000111816 Psip1Q99JF8 528 aaKnown RBP20.1■□□□□ 0.81
Trim71-201ENSMUST00000111816 Tab2Q99K90 693 aa20.1■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms