RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Fsip1Q9D3V5 435 aa13.47□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 SmapQ9R0P4 181 aaKnown RBP13.47□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 FAM186AQ9D9R9 1790 aa13.46□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 SelpQ01102 768 aa13.46□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Pdlim7Q3TJD7 457 aa13.46□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Htatsf1Q8BGC0 757 aa13.46□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 QarsQ8BML9 775 aa13.46□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Col26a1Q91VF6 440 aa13.46□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Supt16hQ920B9 1047 aa13.46□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Pbx4Q99NE9 378 aa13.46□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Mettl16Q9CQG2 553 aaKnown RBP13.46□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Vta1Q9CR26 309 aa13.46□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Elp3Q9CZX0 547 aa13.46□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Ralgps2Q9ERD6 590 aa13.46□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Clip2Q9Z0H8 1047 aa13.46□□□□□ -0.25
Ccdc28b-201ENSMUST00000030586 Anapc15-psA0A140T8L6 141 aa13.45□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Rexo5D3YW29 759 aa13.45□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Lipo1J3QME6 396 aa13.45□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Alppl2P24823 529 aa13.45□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Ccdc174Q3U155 467 aa13.45□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 4930567H17RikQ3V0K5 233 aa13.45□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Prdm1Q60636 856 aa13.45□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Sp4Q62445 782 aa13.45□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Tekt3Q6X6Z7 490 aa13.45□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Fbxo28Q8BIG4 368 aa13.45□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Dppa3Q8QZY3 150 aa13.45□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Srgap1Q91Z69 1062 aa13.45□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 HlcsQ920N2 722 aa13.45□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Katnbl1Q9CWJ3 299 aa13.45□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Trmt112Q9DCG9 125 aa13.45□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 EspnQ9ET47 871 aa13.45□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Rad50P70388 1312 aa13.44□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Zscan18E9PUD6 809 aa13.44□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Clul1Q3ZRW6 464 aa13.44□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Specc1Q5SXY1 1067 aa13.44□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Pip5kl1Q6U7H8 395 aa13.44□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Rassf8Q8CJ96 419 aa13.44□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Ttll1Q91V51 423 aa13.44□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Znf287Q9EQB9 759 aa13.44□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Usp14Q9JMA1 493 aaKnown RBP13.44□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Lama2Q60675 3118 aaKnown RBP13.43□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Skint3A7TZF0 458 aa13.43□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Gjd2O54851 321 aa13.43□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Ms4a2P20490 235 aa13.43□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Cep131Q62036 1060 aa13.43□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Rnf41Q8BH75 317 aa13.43□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 ImmtQ8CAQ8 757 aaKnown RBP13.43□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Nop2Q922K7 793 aaKnown RBP13.43□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Bco2Q99NF1 532 aa13.43□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Lonrf3Q9D4H7 753 aa13.43□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Zbtb43Q9DAI4 467 aa13.43□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Tmem47Q9JJG6 181 aa13.43□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Syt5Q9R0N5 386 aa13.43□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Zc3h4Q6ZPZ3 1304 aaKnown RBP13.42□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Copb2O55029 905 aa13.42□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Myl3P09542 204 aa13.42□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Sfi1Q3UZY0 1216 aaKnown RBP13.42□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Myl10Q62082 202 aa13.42□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 DlatQ8BMF4 642 aa13.42□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Fam155aQ8CCS2 467 aa13.42□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Pus7lQ8CE46 702 aa13.42□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Tdrd3Q91W18 743 aaKnown RBP13.42□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Pdcd6ipQ9WU78 869 aaKnown RBP13.42□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Irf5P56477 497 aa13.41□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Morf4l1P60762 362 aa13.41□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Pald1P70261 859 aa13.41□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 GabpaQ00422 454 aa13.41□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Sec23aQ01405 765 aa13.41□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Btg1-ps1Q3V0S2 161 aa13.41□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Btg1-ps2Q3V0X0 161 aa13.41□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Swap70Q6A028 585 aaKnown RBP13.41□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Recql4Q75NR7 1216 aaKnown RBP13.41□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Terb1Q8C0V1 768 aa13.41□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Amer2Q8CCJ4 672 aa13.41□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Nek9Q8K1R7 984 aa13.41□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Mad2l2Q9D752 211 aa13.41□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Leng1Q9DB98 261 aa13.41□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Cd2apQ9JLQ0 637 aa13.41□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Znhit2Q9QY66 399 aa13.41□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Arih1Q9Z1K5 555 aa13.41□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Dock5B2RY04 1868 aa13.4□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Slc44a1Q6X893 653 aa13.4□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Siglec10Q80ZE3 688 aa13.4□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Ms4a5Q810P8 197 aa13.4□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Rassf10Q8BL43 508 aa13.4□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Sp8Q8BMJ8 486 aa13.4□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Jakmip1Q8BVL9 626 aa13.4□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Trim32Q8CH72 655 aa13.4□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Dlk2Q8K1E3 382 aa13.4□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Pcdhb22Q91XZ8 794 aa13.4□□□□□ -0.26
Ccdc28b-201ENSMUST00000030586 Prr16A3KMN5 304 aa13.39□□□□□ -0.27
Ccdc28b-201ENSMUST00000030586 Kcnb2A6H8H5 907 aa13.39□□□□□ -0.27
Ccdc28b-201ENSMUST00000030586 Gm29094F6Q785 221 aa13.39□□□□□ -0.27
Ccdc28b-201ENSMUST00000030586 Gm13128L7MU96 475 aa13.39□□□□□ -0.27
Ccdc28b-201ENSMUST00000030586 MyocO70624 490 aa13.39□□□□□ -0.27
Ccdc28b-201ENSMUST00000030586 Igfbp4P47879 254 aa13.39□□□□□ -0.27
Ccdc28b-201ENSMUST00000030586 Usp5P56399 858 aaKnown RBP13.39□□□□□ -0.27
Ccdc28b-201ENSMUST00000030586 GclcP97494 637 aa13.39□□□□□ -0.27
Ccdc28b-201ENSMUST00000030586 Sap30bpQ02614 308 aa13.39□□□□□ -0.27
Ccdc28b-201ENSMUST00000030586 Cnnm2Q3TWN3 875 aa13.39□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 39.4 ms