RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Nup58Q8R332 587 aa12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 Dnajc28Q8VCE1 385 aa12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 Utp6Q8VCY6 597 aaKnown RBP12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 Cfap53Q9D439 514 aa12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 Pkd2l2Q9JLG4 621 aa12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 Srcin1Q9QWI6 1250 aa12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 Akap12Q9WTQ5 1684 aa12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 Adcy9P51830 1353 aa12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 Ccdc144bE9PVZ3 520 aa12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 Eftud2O08810 971 aaKnown RBP12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 Xbp1O35426 267 aa12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 InhbcP55104 352 aa12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 JrkQ60976 557 aa12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 Trim17Q7TPM3 477 aa12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 Ipo5Q8BKC5 1097 aaKnown RBP12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 Tldc1Q8K0P3 455 aa12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 Ero1aQ8R180 464 aa12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 Ccdc65Q8VHI7 493 aa12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 HypkQ9CR41 129 aa12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 2310002L09RikQ9D7L5 217 aa12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 Lztfl1Q9JHQ5 299 aa12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 Pik3r4Q8VD65 1358 aa12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 Zfpm1O35615 995 aa12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 Lnx1O70263 728 aa12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 AfpP02772 605 aa12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 DesP31001 469 aaKnown RBP12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 SlmapQ3URD3 845 aa12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 Ccdc160Q3UYG1 323 aa12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 Ehbp1Q69ZW3 1231 aa12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 Ccdc148Q6P5U8 527 aa12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 Prpf38bQ80SY5 542 aaKnown RBP12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 Tmco6Q8BQX5 494 aa12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 Tbl3Q8C4J7 801 aaKnown RBP12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 Hsd3b7Q9EQC1 369 aa12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 Dusp10Q9ESS0 483 aa12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 Myom1Q62234 1667 aaKnown RBP12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 Ino80Q6ZPV2 1559 aa12.85□□□□□ -0.35
Trim55-201ENSMUST00000029139 Atg4a-psA0A0G2JFS9 396 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Lrriq4A6H6A4 596 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Ppp1r9aH3BJD6 1292 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Hoxa2P31245 372 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Trmt1Q3TX08 663 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Yipf3Q3UDR8 347 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Ccdc84Q4VA36 332 aaKnown RBP12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Tmcc1Q69ZZ6 649 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Xlr3bQ6P205 226 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Ankzf1Q80UU1 748 aaKnown RBP12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Zfp438Q8BFX2 798 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Atg4aQ8C9S8 396 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 GptQ8QZR5 496 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Mical1Q8VDP3 1048 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 AdarQ99MU3 1178 aaKnown RBP12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Bloc1s2Q9CWG9 143 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 1700109H08RikQ9D9C0 210 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 DccP70211 1447 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Nup155Q99P88 1391 aaKnown RBP12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Adgrb3Q80ZF8 1522 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Foxn2E9Q7L6 429 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Zc3h7bF8VPP8 982 aaKnown RBP12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Cyp26a1O55127 497 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 GmncQ3URY2 333 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 PsdQ5DTT2 1024 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Cyfip2Q5SQX6 1253 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Trpc1Q61056 793 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 CcnhQ61458 323 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Lca5Q80ST9 704 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Gpatch3Q8BIY1 525 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Kif2bQ8C0N1 668 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Q8C6G1 249 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 MmadhcQ99LS1 296 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 4930449I24RikQ9D5E3 319 aa12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Knop1Q9Z2Q2 478 aaKnown RBP12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Cdk12Q14AX6 1484 aaKnown RBP12.84□□□□□ -0.35
Trim55-201ENSMUST00000029139 Ifit1bl1D3Z6F0 470 aa12.83□□□□□ -0.35
Trim55-201ENSMUST00000029139 Stag2O35638 1231 aa12.83□□□□□ -0.35
Trim55-201ENSMUST00000029139 Slc1a4O35874 532 aa12.83□□□□□ -0.35
Trim55-201ENSMUST00000029139 Ptpn20O55082 426 aa12.83□□□□□ -0.35
Trim55-201ENSMUST00000029139 Atp2a2O55143 1044 aaKnown RBP12.83□□□□□ -0.35
Trim55-201ENSMUST00000029139 Cbx3P23198 183 aaKnown RBP12.83□□□□□ -0.35
Trim55-201ENSMUST00000029139 Pola2P33611 600 aa12.83□□□□□ -0.35
Trim55-201ENSMUST00000029139 CalcaP70160 136 aa12.83□□□□□ -0.35
Trim55-201ENSMUST00000029139 Zfyve27Q3TXX3 415 aa12.83□□□□□ -0.35
Trim55-201ENSMUST00000029139 CoilQ5SU73 570 aa12.83□□□□□ -0.35
Trim55-201ENSMUST00000029139 Srrm3Q80WV7 648 aa12.83□□□□□ -0.35
Trim55-201ENSMUST00000029139 Azin2Q8BVM4 459 aa12.83□□□□□ -0.35
Trim55-201ENSMUST00000029139 Rint1Q8BZ36 792 aa12.83□□□□□ -0.35
Trim55-201ENSMUST00000029139 Ccdc28bQ8CEG5 200 aa12.83□□□□□ -0.35
Trim55-201ENSMUST00000029139 Sox30Q8CGW4 782 aa12.83□□□□□ -0.35
Trim55-201ENSMUST00000029139 NapgQ9CWZ7 312 aa12.83□□□□□ -0.35
Trim55-201ENSMUST00000029139 Desi2Q9D291 194 aa12.83□□□□□ -0.35
Trim55-201ENSMUST00000029139 Toe1Q9D2E2 511 aa12.83□□□□□ -0.35
Trim55-201ENSMUST00000029139 Bcar3Q9QZK2 820 aa12.83□□□□□ -0.35
Trim55-201ENSMUST00000029139 Triml2E9PW10 424 aa12.83□□□□□ -0.36
Trim55-201ENSMUST00000029139 Serpinb6eI7HJI3 429 aa12.83□□□□□ -0.36
Trim55-201ENSMUST00000029139 Lrrc23O35125 340 aa12.83□□□□□ -0.36
Trim55-201ENSMUST00000029139 Dync1i2O88487 612 aaKnown RBP12.83□□□□□ -0.36
Trim55-201ENSMUST00000029139 Kif5aP33175 1027 aa12.83□□□□□ -0.36
Trim55-201ENSMUST00000029139 Tm6sf1P58749 370 aa12.83□□□□□ -0.36
Trim55-201ENSMUST00000029139 Pkn1P70268 946 aa12.83□□□□□ -0.36
Trim55-201ENSMUST00000029139 Smarcad1Q04692 1021 aa12.83□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 45.4 ms