RNA–Protein interactions for RNA: ENSMUST00000225438.1

Shroom3-211, Transcript of Protein Shroom3, mousemouse

BASIC

Gene Shroom3, Length 5,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-211ENSMUST00000225438 Gm11563B1AQ90 168 aa5.02□□□□□ -1.61
Shroom3-211ENSMUST00000225438 Gm11595B1AQA7 289 aa5.02□□□□□ -1.61
Shroom3-211ENSMUST00000225438 Krtap4-8B1AQA8 209 aa5.02□□□□□ -1.61
Shroom3-211ENSMUST00000225438 Krtap4-7Q9D732 168 aa5.02□□□□□ -1.61
Shroom3-211ENSMUST00000225438 Gm11938Q9D3H4 131 aa5.01□□□□□ -1.61
Shroom3-211ENSMUST00000225438 Sprr2dO70555 85 aa5□□□□□ -1.61
Shroom3-211ENSMUST00000225438 Krtap4-9B1AQA9 244 aa4.99□□□□□ -1.61
Shroom3-211ENSMUST00000225438 4932415D10RikA0A1W2P6U8 4986 aa4.99□□□□□ -1.61
Shroom3-211ENSMUST00000225438 Ubr4A2AN08 5180 aa4.96□□□□□ -1.62
Shroom3-211ENSMUST00000225438 Lce1kJ3QP15 125 aa4.92□□□□□ -1.62
Shroom3-211ENSMUST00000225438 Mt3P28184 68 aa4.89□□□□□ -1.63
Shroom3-211ENSMUST00000225438 Krtap4-13Q9D7P3 165 aa4.87□□□□□ -1.63
Shroom3-211ENSMUST00000225438 Abca13Q5SSE9 5034 aa4.87□□□□□ -1.63
Shroom3-211ENSMUST00000225438 Fat4Q2PZL6 4981 aa4.86□□□□□ -1.63
Shroom3-211ENSMUST00000225438 Muc5bE9Q5I3 4800 aa4.85□□□□□ -1.63
Shroom3-211ENSMUST00000225438 ZanO88799 5376 aa4.82□□□□□ -1.64
Shroom3-211ENSMUST00000225438 Krtap17-1A2A5X6 109 aa4.75□□□□□ -1.65
Shroom3-211ENSMUST00000225438 Hmcn2A2AJ76 5100 aa4.72□□□□□ -1.65
Shroom3-211ENSMUST00000225438 Fsip2A2ARZ3 6995 aa4.63□□□□□ -1.67
Shroom3-211ENSMUST00000225438 Krtap4-16Q91W93 202 aa4.62□□□□□ -1.67
Shroom3-211ENSMUST00000225438 Syne2Q6ZWQ0 6874 aaKnown RBP4.61□□□□□ -1.67
Shroom3-211ENSMUST00000225438 Rnf213E9Q555 5152 aaKnown RBP4.59□□□□□ -1.67
Shroom3-211ENSMUST00000225438 Lce1a1Q9CQH5 143 aa4.59□□□□□ -1.67
Shroom3-211ENSMUST00000225438 Krtap6-3A0A087WQL6 57 aa4.51□□□□□ -1.69
Shroom3-211ENSMUST00000225438 Sprr2bO70554 98 aa4.51□□□□□ -1.69
Shroom3-211ENSMUST00000225438 Ush2AQ2QI47 5193 aa4.5□□□□□ -1.69
Shroom3-211ENSMUST00000225438 Krtap31-2Q8CAY5 177 aa4.46□□□□□ -1.7
Shroom3-211ENSMUST00000225438 Mt1P02802 61 aaKnown RBP4.45□□□□□ -1.7
Shroom3-211ENSMUST00000225438 Gm11554B1AQB2 190 aa4.44□□□□□ -1.7
Shroom3-211ENSMUST00000225438 SspoQ8CG65 4998 aa4.32□□□□□ -1.72
Shroom3-211ENSMUST00000225438 Krtap20-2E9Q0A8 60 aa4.22□□□□□ -1.73
Shroom3-211ENSMUST00000225438 ObscnA2AAJ9 8891 aaKnown RBP4.19□□□□□ -1.74
Shroom3-211ENSMUST00000225438 Muc16A0A140LJ72 8478 aa4.16□□□□□ -1.74
Shroom3-211ENSMUST00000225438 Eppk1Q8R0W0 6548 aa4.01□□□□□ -1.77
Shroom3-211ENSMUST00000225438 Kmt2dQ6PDK2 5588 aa3.84□□□□□ -1.8
Shroom3-211ENSMUST00000225438 DstQ91ZU6 7393 aaKnown RBP3.78□□□□□ -1.8
Shroom3-211ENSMUST00000225438 Macf1Q9QXZ0 7354 aaKnown RBP3.76□□□□□ -1.81
Shroom3-211ENSMUST00000225438 NebE9Q1W3 7152 aa3.72□□□□□ -1.81
Shroom3-211ENSMUST00000225438 1110025L11RikO09048 78 aa3.65□□□□□ -1.83
Shroom3-211ENSMUST00000225438 Krtap6-5Q925H3 78 aa3.65□□□□□ -1.83
Shroom3-211ENSMUST00000225438 Gm11555B1AQ89 175 aa3.65□□□□□ -1.83
Shroom3-211ENSMUST00000225438 Gm10229O08631 77 aa3.49□□□□□ -1.85
Shroom3-211ENSMUST00000225438 Muc19Q6PZE0 7524 aa3.33□□□□□ -1.88
Shroom3-211ENSMUST00000225438 Gm11559Q9D3H7 191 aa3.33□□□□□ -1.88
Shroom3-211ENSMUST00000225438 Phgr1Q8K0G7 91 aa3.27□□□□□ -1.89
Shroom3-211ENSMUST00000225438 Gm11568A2A4M2 211 aa3.23□□□□□ -1.89
Shroom3-211ENSMUST00000225438 Krtap9-1Q64526 186 aa3.23□□□□□ -1.89
Shroom3-211ENSMUST00000225438 Gm11639A0A1D5RLM8 5808 aa3.21□□□□□ -1.89
Shroom3-211ENSMUST00000225438 Gpr98Q8VHN7 6298 aaKnown RBP3.09□□□□□ -1.92
Shroom3-211ENSMUST00000225438 Krtap5-2Q9D5Z7 189 aa2.83□□□□□ -1.96
Shroom3-211ENSMUST00000225438 Hmcn1D3YXG0 5634 aa2.79□□□□□ -1.96
Shroom3-211ENSMUST00000225438 Krtap6-2O08884 159 aa2.78□□□□□ -1.96
Shroom3-211ENSMUST00000225438 Gm4553A0A1B0GSA9 284 aa2.67□□□□□ -1.98
Shroom3-211ENSMUST00000225438 Krtap21-1Q925H4 128 aa2.52□□□□□ -2.01
Shroom3-211ENSMUST00000225438 Gm2431E9Q8S1 172 aa2.5□□□□□ -2.01
Shroom3-211ENSMUST00000225438 AhnakE9Q616 5656 aaKnown RBP2.49□□□□□ -2.01
Shroom3-211ENSMUST00000225438 A030005L19RikA0A1Y7VIU2 113 aa2.49□□□□□ -2.01
Shroom3-211ENSMUST00000225438 Gm11567Q9D141 195 aa2.46□□□□□ -2.02
Shroom3-211ENSMUST00000225438 Gm10153A0A1B0GRL1 320 aa2.4□□□□□ -2.02
Shroom3-211ENSMUST00000225438 Gm45337A0A1B0GS71 263 aa2.28□□□□□ -2.05
Shroom3-211ENSMUST00000225438 Gm40460A0A1B0GR10 244 aa2.25□□□□□ -2.05
Shroom3-211ENSMUST00000225438 Gm7579A0A1B0GRJ4 243 aa2.25□□□□□ -2.05
Shroom3-211ENSMUST00000225438 Krtap5-5Q2TA51 241 aa2.25□□□□□ -2.05
Shroom3-211ENSMUST00000225438 Krtap5-4Q62220 223 aa2.25□□□□□ -2.05
Shroom3-211ENSMUST00000225438 Gm39115A0A1B0GSH7 232 aa2.1□□□□□ -2.07
Shroom3-211ENSMUST00000225438 A0A1Y7VJH8 109 aa2.06□□□□□ -2.08
Shroom3-211ENSMUST00000225438 A0A1Y7VLE6 161 aa1.91□□□□□ -2.1
Shroom3-211ENSMUST00000225438 Gm45618A0A1B0GSA0 219 aa1.81□□□□□ -2.12
Shroom3-211ENSMUST00000225438 Gm29735A0A1B0GT06 219 aa1.7□□□□□ -2.14
Shroom3-211ENSMUST00000225438 Krtap5-1Q64507 230 aa1.42□□□□□ -2.18
Shroom3-211ENSMUST00000225438 A030003K21RikA0A1Y7VIM3 128 aa1.19□□□□□ -2.22
Shroom3-211ENSMUST00000225438 Gm6217A0A1Y7VJK9 128 aa1.14□□□□□ -2.23
Shroom3-211ENSMUST00000225438 A0A286YCP9 139 aa1.1□□□□□ -2.23
Shroom3-211ENSMUST00000225438 A0A1Y7VJ07 166 aa1.08□□□□□ -2.24
Shroom3-211ENSMUST00000225438 A030005K14RikA0A1Y7VNY1 122 aa1.01□□□□□ -2.25
Shroom3-211ENSMUST00000225438 Krtap28-10A0A1Y7VP58 119 aa0.99□□□□□ -2.25
Shroom3-211ENSMUST00000225438 Gm7544A0A1Y7VJ58 118 aa0.97□□□□□ -2.25
Shroom3-211ENSMUST00000225438 Krtap28-13A0A087WQP5 138 aa0.96□□□□□ -2.26
Shroom3-211ENSMUST00000225438 A030014E15RikA0A1Y7VJV2 120 aa0.93□□□□□ -2.26
Shroom3-211ENSMUST00000225438 Gm4559A4IF42 199 aa0.9□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 61.9 ms