RNA–Protein interactions for RNA: ENSMUST00000190780.6

Fn1-217, Transcript of Fibronectin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Fn1, Length 7,694 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-217ENSMUST00000190780 Dnah8Q91XQ0 4731 aa3.65□□□□□ -1.83
Fn1-217ENSMUST00000190780 Gm11938Q9D3H4 131 aa3.64□□□□□ -1.83
Fn1-217ENSMUST00000190780 Ryr2E9Q401 4966 aaKnown RBP3.63□□□□□ -1.83
Fn1-217ENSMUST00000190780 Ryr1E9PZQ0 5035 aa3.62□□□□□ -1.83
Fn1-217ENSMUST00000190780 Krtap6-3A0A087WQL6 57 aa3.6□□□□□ -1.83
Fn1-217ENSMUST00000190780 Herc2Q4U2R1 4836 aa3.57□□□□□ -1.84
Fn1-217ENSMUST00000190780 Pkhd1l1Q80ZA4 4249 aa3.52□□□□□ -1.85
Fn1-217ENSMUST00000190780 Lrp2A2ARV4 4660 aa3.46□□□□□ -1.85
Fn1-217ENSMUST00000190780 Fsip2A2ARZ3 6995 aa3.44□□□□□ -1.86
Fn1-217ENSMUST00000190780 Kmt2cQ8BRH4 4903 aa3.4□□□□□ -1.86
Fn1-217ENSMUST00000190780 Kiaa1109A2AAE1 5005 aa3.4□□□□□ -1.87
Fn1-217ENSMUST00000190780 Krtap4-16Q91W93 202 aa3.39□□□□□ -1.87
Fn1-217ENSMUST00000190780 Syne2Q6ZWQ0 6874 aaKnown RBP3.37□□□□□ -1.87
Fn1-217ENSMUST00000190780 Birc6O88738 4882 aa3.36□□□□□ -1.87
Fn1-217ENSMUST00000190780 HydinQ80W93 5154 aa3.29□□□□□ -1.88
Fn1-217ENSMUST00000190780 Herc1E9PZP8 4859 aa3.26□□□□□ -1.89
Fn1-217ENSMUST00000190780 Abca13Q5SSE9 5034 aa3.24□□□□□ -1.89
Fn1-217ENSMUST00000190780 Krtap20-2E9Q0A8 60 aa3.19□□□□□ -1.9
Fn1-217ENSMUST00000190780 PcloQ9QYX7 5068 aa3.16□□□□□ -1.9
Fn1-217ENSMUST00000190780 Gm11555B1AQ89 175 aa3.15□□□□□ -1.91
Fn1-217ENSMUST00000190780 4932415D10RikA0A1W2P6U8 4986 aa3.11□□□□□ -1.91
Fn1-217ENSMUST00000190780 Muc5bE9Q5I3 4800 aa3.08□□□□□ -1.92
Fn1-217ENSMUST00000190780 ZanO88799 5376 aa3□□□□□ -1.93
Fn1-217ENSMUST00000190780 Mt1P02802 61 aaKnown RBP2.99□□□□□ -1.93
Fn1-217ENSMUST00000190780 Fat4Q2PZL6 4981 aa2.97□□□□□ -1.93
Fn1-217ENSMUST00000190780 Ush2AQ2QI47 5193 aa2.95□□□□□ -1.94
Fn1-217ENSMUST00000190780 Mdn1A2ANY6 5589 aaKnown RBP2.94□□□□□ -1.94
Fn1-217ENSMUST00000190780 Syne1Q6ZWR6 8799 aa2.93□□□□□ -1.94
Fn1-217ENSMUST00000190780 Ubr4A2AN08 5180 aa2.89□□□□□ -1.95
Fn1-217ENSMUST00000190780 Hmcn2A2AJ76 5100 aa2.75□□□□□ -1.97
Fn1-217ENSMUST00000190780 Rnf213E9Q555 5152 aaKnown RBP2.74□□□□□ -1.97
Fn1-217ENSMUST00000190780 Eppk1Q8R0W0 6548 aa2.73□□□□□ -1.97
Fn1-217ENSMUST00000190780 SspoQ8CG65 4998 aa2.62□□□□□ -1.99
Fn1-217ENSMUST00000190780 ObscnA2AAJ9 8891 aaKnown RBP2.57□□□□□ -2
Fn1-217ENSMUST00000190780 Phgr1Q8K0G7 91 aa2.55□□□□□ -2
Fn1-217ENSMUST00000190780 NebE9Q1W3 7152 aa2.53□□□□□ -2
Fn1-217ENSMUST00000190780 Gm10229O08631 77 aa2.51□□□□□ -2.01
Fn1-217ENSMUST00000190780 1110025L11RikO09048 78 aa2.48□□□□□ -2.01
Fn1-217ENSMUST00000190780 Krtap6-5Q925H3 78 aa2.48□□□□□ -2.01
Fn1-217ENSMUST00000190780 DstQ91ZU6 7393 aaKnown RBP2.43□□□□□ -2.02
Fn1-217ENSMUST00000190780 Gm11559Q9D3H7 191 aa2.4□□□□□ -2.02
Fn1-217ENSMUST00000190780 Muc16A0A140LJ72 8478 aa2.38□□□□□ -2.03
Fn1-217ENSMUST00000190780 Macf1Q9QXZ0 7354 aaKnown RBP2.33□□□□□ -2.04
Fn1-217ENSMUST00000190780 Gm11568A2A4M2 211 aa2.15□□□□□ -2.07
Fn1-217ENSMUST00000190780 Krtap9-1Q64526 186 aa2.15□□□□□ -2.07
Fn1-217ENSMUST00000190780 Kmt2dQ6PDK2 5588 aa2.03□□□□□ -2.08
Fn1-217ENSMUST00000190780 Muc19Q6PZE0 7524 aa2.02□□□□□ -2.09
Fn1-217ENSMUST00000190780 Krtap6-2O08884 159 aa1.95□□□□□ -2.1
Fn1-217ENSMUST00000190780 Gm11567Q9D141 195 aa1.85□□□□□ -2.11
Fn1-217ENSMUST00000190780 Krtap5-2Q9D5Z7 189 aa1.83□□□□□ -2.12
Fn1-217ENSMUST00000190780 Gm2431E9Q8S1 172 aa1.77□□□□□ -2.13
Fn1-217ENSMUST00000190780 Gpr98Q8VHN7 6298 aaKnown RBP1.73□□□□□ -2.13
Fn1-217ENSMUST00000190780 Gm4553A0A1B0GSA9 284 aa1.73□□□□□ -2.13
Fn1-217ENSMUST00000190780 Gm11639A0A1D5RLM8 5808 aa1.67□□□□□ -2.14
Fn1-217ENSMUST00000190780 A030005L19RikA0A1Y7VIU2 113 aa1.63□□□□□ -2.15
Fn1-217ENSMUST00000190780 Hmcn1D3YXG0 5634 aa1.6□□□□□ -2.15
Fn1-217ENSMUST00000190780 Krtap21-1Q925H4 128 aa1.59□□□□□ -2.15
Fn1-217ENSMUST00000190780 Gm10153A0A1B0GRL1 320 aa1.57□□□□□ -2.16
Fn1-217ENSMUST00000190780 Gm45337A0A1B0GS71 263 aa1.53□□□□□ -2.16
Fn1-217ENSMUST00000190780 A0A1Y7VJH8 109 aa1.5□□□□□ -2.17
Fn1-217ENSMUST00000190780 Gm40460A0A1B0GR10 244 aa1.48□□□□□ -2.17
Fn1-217ENSMUST00000190780 Gm7579A0A1B0GRJ4 243 aa1.48□□□□□ -2.17
Fn1-217ENSMUST00000190780 Krtap5-5Q2TA51 241 aa1.48□□□□□ -2.17
Fn1-217ENSMUST00000190780 Krtap5-4Q62220 223 aa1.48□□□□□ -2.17
Fn1-217ENSMUST00000190780 AhnakE9Q616 5656 aaKnown RBP1.44□□□□□ -2.18
Fn1-217ENSMUST00000190780 Gm39115A0A1B0GSH7 232 aa1.44□□□□□ -2.18
Fn1-217ENSMUST00000190780 Gm45618A0A1B0GSA0 219 aa1.25□□□□□ -2.21
Fn1-217ENSMUST00000190780 Krtap28-10A0A1Y7VP58 119 aa1.24□□□□□ -2.21
Fn1-217ENSMUST00000190780 A030005K14RikA0A1Y7VNY1 122 aa1.2□□□□□ -2.22
Fn1-217ENSMUST00000190780 A0A1Y7VLE6 161 aa1.18□□□□□ -2.22
Fn1-217ENSMUST00000190780 A030014E15RikA0A1Y7VJV2 120 aa1.16□□□□□ -2.22
Fn1-217ENSMUST00000190780 Krtap5-1Q64507 230 aa1.15□□□□□ -2.23
Fn1-217ENSMUST00000190780 A030003K21RikA0A1Y7VIM3 128 aa1.14□□□□□ -2.23
Fn1-217ENSMUST00000190780 A0A1Y7VJ07 166 aa1.13□□□□□ -2.23
Fn1-217ENSMUST00000190780 Gm7544A0A1Y7VJ58 118 aa1.12□□□□□ -2.23
Fn1-217ENSMUST00000190780 Krtap28-13A0A087WQP5 138 aa1.11□□□□□ -2.23
Fn1-217ENSMUST00000190780 Gm29735A0A1B0GT06 219 aa1.09□□□□□ -2.23
Fn1-217ENSMUST00000190780 Gm6217A0A1Y7VJK9 128 aa1.05□□□□□ -2.24
Fn1-217ENSMUST00000190780 A0A286YCP9 139 aa0.93□□□□□ -2.26
Fn1-217ENSMUST00000190780 Gm4559A4IF42 199 aa0.62□□□□□ -2.31
Retrieved 80 of 22,080 RNA–protein pairs in 119.8 ms