RNA–Protein interactions for RNA: ENSMUST00000187424.1

Msh3-205, Transcript of DNA mismatch repair protein Msh3, mousemouse

TSL 2 BASIC

Gene Msh3, Length 666 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-205ENSMUST00000187424 Gm3646F6S692 53 aa5.82□□□□□ -1.48
Msh3-205ENSMUST00000187424 Kmt2dQ6PDK2 5588 aa5.8□□□□□ -1.48
Msh3-205ENSMUST00000187424 Romo1P60603 79 aa5.78□□□□□ -1.48
Msh3-205ENSMUST00000187424 Lce1kJ3QP15 125 aa5.77□□□□□ -1.49
Msh3-205ENSMUST00000187424 Gpr98Q8VHN7 6298 aaKnown RBP5.72□□□□□ -1.49
Msh3-205ENSMUST00000187424 Gm11568A2A4M2 211 aa5.72□□□□□ -1.49
Msh3-205ENSMUST00000187424 Krtap9-1Q64526 186 aa5.72□□□□□ -1.49
Msh3-205ENSMUST00000187424 Krtap7-1Q9D3I6 87 aa5.7□□□□□ -1.5
Msh3-205ENSMUST00000187424 Gm2431E9Q8S1 172 aa5.69□□□□□ -1.5
Msh3-205ENSMUST00000187424 Sprr2iO70560 76 aa5.69□□□□□ -1.5
Msh3-205ENSMUST00000187424 Pcp4P63054 62 aa5.69□□□□□ -1.5
Msh3-205ENSMUST00000187424 Muc19Q6PZE0 7524 aa5.65□□□□□ -1.5
Msh3-205ENSMUST00000187424 Syne1Q6ZWR6 8799 aa5.62□□□□□ -1.51
Msh3-205ENSMUST00000187424 Gm45337A0A1B0GS71 263 aa5.58□□□□□ -1.52
Msh3-205ENSMUST00000187424 Gm10272F7CZ33 110 aa5.56□□□□□ -1.52
Msh3-205ENSMUST00000187424 Gm10337F7DEP7 55 aa5.54□□□□□ -1.52
Msh3-205ENSMUST00000187424 Lce3bQ9CQM7 98 aa5.46□□□□□ -1.54
Msh3-205ENSMUST00000187424 Gm39115A0A1B0GSH7 232 aa5.37□□□□□ -1.55
Msh3-205ENSMUST00000187424 Gm40460A0A1B0GR10 244 aa5.35□□□□□ -1.55
Msh3-205ENSMUST00000187424 Gm7579A0A1B0GRJ4 243 aa5.35□□□□□ -1.55
Msh3-205ENSMUST00000187424 Krtap5-5Q2TA51 241 aa5.35□□□□□ -1.55
Msh3-205ENSMUST00000187424 Krtap5-4Q62220 223 aa5.35□□□□□ -1.55
Msh3-205ENSMUST00000187424 Gm10153A0A1B0GRL1 320 aa5.34□□□□□ -1.55
Msh3-205ENSMUST00000187424 Tnp1P10856 55 aa5.33□□□□□ -1.56
Msh3-205ENSMUST00000187424 Hmcn1D3YXG0 5634 aa5.32□□□□□ -1.56
Msh3-205ENSMUST00000187424 Lce1fB9EJP6 147 aa5.24□□□□□ -1.57
Msh3-205ENSMUST00000187424 Lce1cQ9D1C5 147 aa5.24□□□□□ -1.57
Msh3-205ENSMUST00000187424 Gm40193A0A1B0GT39 78 aa5.22□□□□□ -1.57
Msh3-205ENSMUST00000187424 DstQ91ZU6 7393 aaKnown RBP5.2□□□□□ -1.58
Msh3-205ENSMUST00000187424 NebE9Q1W3 7152 aa5.17□□□□□ -1.58
Msh3-205ENSMUST00000187424 Gm11938Q9D3H4 131 aa5.16□□□□□ -1.58
Msh3-205ENSMUST00000187424 Krtap4-16Q91W93 202 aa5.14□□□□□ -1.59
Msh3-205ENSMUST00000187424 Gm45618A0A1B0GSA0 219 aa5.12□□□□□ -1.59
Msh3-205ENSMUST00000187424 Krtap19-4Q925H7 84 aa5.12□□□□□ -1.59
Msh3-205ENSMUST00000187424 Mt1P02802 61 aaKnown RBP5.07□□□□□ -1.6
Msh3-205ENSMUST00000187424 Lce3cQ91V05 98 aa4.93□□□□□ -1.62
Msh3-205ENSMUST00000187424 Lce3dE9Q8V1 98 aa4.86□□□□□ -1.63
Msh3-205ENSMUST00000187424 ObscnA2AAJ9 8891 aaKnown RBP4.85□□□□□ -1.63
Msh3-205ENSMUST00000187424 AhnakE9Q616 5656 aaKnown RBP4.83□□□□□ -1.64
Msh3-205ENSMUST00000187424 Sprr2fO70557 76 aa4.79□□□□□ -1.64
Msh3-205ENSMUST00000187424 Lce3eF8VQJ0 98 aa4.74□□□□□ -1.65
Msh3-205ENSMUST00000187424 Lce3fQ6PAI4 98 aa4.74□□□□□ -1.65
Msh3-205ENSMUST00000187424 Sprr2dO70555 85 aa4.7□□□□□ -1.66
Msh3-205ENSMUST00000187424 Mp68P56379 58 aa4.68□□□□□ -1.66
Msh3-205ENSMUST00000187424 Mt3P28184 68 aa4.66□□□□□ -1.66
Msh3-205ENSMUST00000187424 A0A1Y7VLE6 161 aa4.58□□□□□ -1.68
Msh3-205ENSMUST00000187424 Lce3aQ497I5 98 aa4.54□□□□□ -1.68
Msh3-205ENSMUST00000187424 4933428G20RikQ9D3X4 101 aa4.52□□□□□ -1.69
Msh3-205ENSMUST00000187424 Gm10100J3QK64 120 aa4.43□□□□□ -1.7
Msh3-205ENSMUST00000187424 SvipQ3UZP4 77 aa4.4□□□□□ -1.71
Msh3-205ENSMUST00000187424 Gm20538F6Z9R1 75 aa4.27□□□□□ -1.73
Msh3-205ENSMUST00000187424 Gm10142J3KMP7 120 aa4.14□□□□□ -1.75
Msh3-205ENSMUST00000187424 Sprr2eO70556 76 aa4.07□□□□□ -1.76
Msh3-205ENSMUST00000187424 Sprr2hO70559 108 aa4.07□□□□□ -1.76
Msh3-205ENSMUST00000187424 A0A1Y7VJ07 166 aa4.02□□□□□ -1.77
Msh3-205ENSMUST00000187424 Gm10024A0A0A0MQA4 119 aa3.99□□□□□ -1.77
Msh3-205ENSMUST00000187424 Gm29735A0A1B0GT06 219 aa3.91□□□□□ -1.78
Msh3-205ENSMUST00000187424 Muc16A0A140LJ72 8478 aa3.88□□□□□ -1.79
Msh3-205ENSMUST00000187424 Krtap28-10A0A1Y7VP58 119 aa3.78□□□□□ -1.8
Msh3-205ENSMUST00000187424 Krtap28-13A0A087WQP5 138 aa3.68□□□□□ -1.82
Msh3-205ENSMUST00000187424 1110025L11RikO09048 78 aa3.66□□□□□ -1.82
Msh3-205ENSMUST00000187424 Krtap6-5Q925H3 78 aa3.66□□□□□ -1.82
Msh3-205ENSMUST00000187424 A030005K14RikA0A1Y7VNY1 122 aa3.65□□□□□ -1.83
Msh3-205ENSMUST00000187424 Gm11567Q9D141 195 aa3.6□□□□□ -1.83
Msh3-205ENSMUST00000187424 Ndufaf8A2AMZ4 74 aa3.57□□□□□ -1.84
Msh3-205ENSMUST00000187424 A030003K21RikA0A1Y7VIM3 128 aa3.4□□□□□ -1.87
Msh3-205ENSMUST00000187424 Gm7544A0A1Y7VJ58 118 aa3.32□□□□□ -1.88
Msh3-205ENSMUST00000187424 Krtap31-1Q9D644 177 aa3.31□□□□□ -1.88
Msh3-205ENSMUST00000187424 A030014E15RikA0A1Y7VJV2 120 aa3.29□□□□□ -1.88
Msh3-205ENSMUST00000187424 Gm10229O08631 77 aa3.28□□□□□ -1.88
Msh3-205ENSMUST00000187424 Krtap5-1Q64507 230 aa3.19□□□□□ -1.9
Msh3-205ENSMUST00000187424 Krtap31-2Q8CAY5 177 aa3.05□□□□□ -1.92
Msh3-205ENSMUST00000187424 Krtap21-1Q925H4 128 aa2.98□□□□□ -1.93
Msh3-205ENSMUST00000187424 Sprr2bO70554 98 aa2.93□□□□□ -1.94
Msh3-205ENSMUST00000187424 Gm6217A0A1Y7VJK9 128 aa2.92□□□□□ -1.94
Msh3-205ENSMUST00000187424 Krtap6-2O08884 159 aa2.9□□□□□ -1.95
Msh3-205ENSMUST00000187424 A0A286YCP9 139 aa2.68□□□□□ -1.98
Msh3-205ENSMUST00000187424 Gm9112A2AI92 75 aa2.6□□□□□ -1.99
Msh3-205ENSMUST00000187424 Phgr1Q8K0G7 91 aa2.44□□□□□ -2.02
Msh3-205ENSMUST00000187424 Gm4559A4IF42 199 aa2.28□□□□□ -2.04
Retrieved 80 of 22,080 RNA–protein pairs in 141 ms