RNA–Protein interactions for RNA: ENSMUST00000180093.1

Ccr9-205, Transcript of C-C chemokine receptor type 9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccr9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9-205ENSMUST00000180093 Gm11562A0PK51 136 aa1.86□□□□□ -2.11
Ccr9-205ENSMUST00000180093 Sprr2a3Q4KL71 83 aa1.85□□□□□ -2.11
Ccr9-205ENSMUST00000180093 Sprr2a1Q9CQK8 83 aa1.85□□□□□ -2.11
Ccr9-205ENSMUST00000180093 Lce1hQ9D6R3 140 aa1.82□□□□□ -2.12
Ccr9-205ENSMUST00000180093 Krtap16-3Q8C1I6 86 aa1.8□□□□□ -2.12
Ccr9-205ENSMUST00000180093 Krtap1-5A2A590 122 aa1.8□□□□□ -2.12
Ccr9-205ENSMUST00000180093 Gm11639A0A1D5RLM8 5808 aa1.79□□□□□ -2.12
Ccr9-205ENSMUST00000180093 Kmt2dQ6PDK2 5588 aa1.79□□□□□ -2.12
Ccr9-205ENSMUST00000180093 Krtap19-1Q925H2 87 aa1.79□□□□□ -2.12
Ccr9-205ENSMUST00000180093 Krtap19-3Q925H6 87 aa1.78□□□□□ -2.12
Ccr9-205ENSMUST00000180093 Gm6358A0A087WPH4 74 aa1.78□□□□□ -2.12
Ccr9-205ENSMUST00000180093 Ush2AQ2QI47 5193 aa1.77□□□□□ -2.13
Ccr9-205ENSMUST00000180093 Muc16A0A140LJ72 8478 aa1.77□□□□□ -2.13
Ccr9-205ENSMUST00000180093 Gm9789Q8BIG3 52 aa1.76□□□□□ -2.13
Ccr9-205ENSMUST00000180093 Prm1P02319 51 aa1.76□□□□□ -2.13
Ccr9-205ENSMUST00000180093 Krtap12-1Q9Z287 130 aa1.75□□□□□ -2.13
Ccr9-205ENSMUST00000180093 Krtap1-3A2A588 173 aa1.75□□□□□ -2.13
Ccr9-205ENSMUST00000180093 Gm7735D3YX18 52 aa1.75□□□□□ -2.13
Ccr9-205ENSMUST00000180093 Hmcn2A2AJ76 5100 aa1.74□□□□□ -2.13
Ccr9-205ENSMUST00000180093 2310046K23RikA0A0A6YVW6 87 aa1.73□□□□□ -2.13
Ccr9-205ENSMUST00000180093 Ubr4A2AN08 5180 aa1.73□□□□□ -2.13
Ccr9-205ENSMUST00000180093 4932415D10RikA0A1W2P6U8 4986 aa1.73□□□□□ -2.13
Ccr9-205ENSMUST00000180093 Lce1eQ9D139 143 aa1.72□□□□□ -2.13
Ccr9-205ENSMUST00000180093 Krtap1-4Q3V2D6 188 aa1.71□□□□□ -2.14
Ccr9-205ENSMUST00000180093 ZanO88799 5376 aa1.7□□□□□ -2.14
Ccr9-205ENSMUST00000180093 Fat4Q2PZL6 4981 aa1.68□□□□□ -2.14
Ccr9-205ENSMUST00000180093 Krtap19-9bQ99NG9 58 aa1.67□□□□□ -2.14
Ccr9-205ENSMUST00000180093 Krtap19-9aF8WH65 55 aa1.66□□□□□ -2.14
Ccr9-205ENSMUST00000180093 Gm10100J3QK64 120 aa1.65□□□□□ -2.14
Ccr9-205ENSMUST00000180093 Rnf213E9Q555 5152 aaKnown RBP1.65□□□□□ -2.15
Ccr9-205ENSMUST00000180093 SspoQ8CG65 4998 aa1.6□□□□□ -2.15
Ccr9-205ENSMUST00000180093 Krtap9-5A2A5X3 358 aa1.59□□□□□ -2.15
Ccr9-205ENSMUST00000180093 Krtap19-2Q925I0 141 aa1.59□□□□□ -2.15
Ccr9-205ENSMUST00000180093 Gm10061D3Z714 54 aa1.59□□□□□ -2.15
Ccr9-205ENSMUST00000180093 Gm10142J3KMP7 120 aa1.59□□□□□ -2.16
Ccr9-205ENSMUST00000180093 Gm10272F7CZ33 110 aa1.57□□□□□ -2.16
Ccr9-205ENSMUST00000180093 Lce3bQ9CQM7 98 aa1.57□□□□□ -2.16
Ccr9-205ENSMUST00000180093 Krtap8-1O08633 61 aa1.56□□□□□ -2.16
Ccr9-205ENSMUST00000180093 Lce3cQ91V05 98 aa1.55□□□□□ -2.16
Ccr9-205ENSMUST00000180093 Mt3P28184 68 aa1.55□□□□□ -2.16
Ccr9-205ENSMUST00000180093 Lce3dE9Q8V1 98 aa1.53□□□□□ -2.16
Ccr9-205ENSMUST00000180093 Muc5bE9Q5I3 4800 aa1.52□□□□□ -2.17
Ccr9-205ENSMUST00000180093 Mdn1A2ANY6 5589 aaKnown RBP1.51□□□□□ -2.17
Ccr9-205ENSMUST00000180093 Sprr2iO70560 76 aa1.5□□□□□ -2.17
Ccr9-205ENSMUST00000180093 Sprr2gO70558 76 aa1.5□□□□□ -2.17
Ccr9-205ENSMUST00000180093 Krtap9-3Q3V2C1 136 aa1.5□□□□□ -2.17
Ccr9-205ENSMUST00000180093 Sprr2dO70555 85 aa1.49□□□□□ -2.17
Ccr9-205ENSMUST00000180093 ObscnA2AAJ9 8891 aaKnown RBP1.49□□□□□ -2.17
Ccr9-205ENSMUST00000180093 Mt2P02798 61 aa1.48□□□□□ -2.17
Ccr9-205ENSMUST00000180093 Lce3aQ497I5 98 aa1.48□□□□□ -2.17
Ccr9-205ENSMUST00000180093 Sprr2kO70562 68 aa1.48□□□□□ -2.17
Ccr9-205ENSMUST00000180093 Lce3eF8VQJ0 98 aa1.47□□□□□ -2.17
Ccr9-205ENSMUST00000180093 Lce3fQ6PAI4 98 aa1.47□□□□□ -2.17
Ccr9-205ENSMUST00000180093 Krtap22-2J3QNX6 67 aa1.47□□□□□ -2.17
Ccr9-205ENSMUST00000180093 Krtap4-16Q91W93 202 aa1.46□□□□□ -2.18
Ccr9-205ENSMUST00000180093 Gm11938Q9D3H4 131 aa1.45□□□□□ -2.18
Ccr9-205ENSMUST00000180093 Gm10024A0A0A0MQA4 119 aa1.41□□□□□ -2.18
Ccr9-205ENSMUST00000180093 Sprr2fO70557 76 aa1.38□□□□□ -2.19
Ccr9-205ENSMUST00000180093 2300003K06RikA2A4M0 262 aa1.38□□□□□ -2.19
Ccr9-205ENSMUST00000180093 Sprr2eO70556 76 aa1.37□□□□□ -2.19
Ccr9-205ENSMUST00000180093 Macf1Q9QXZ0 7354 aaKnown RBP1.34□□□□□ -2.19
Ccr9-205ENSMUST00000180093 Syne2Q6ZWQ0 6874 aaKnown RBP1.34□□□□□ -2.2
Ccr9-205ENSMUST00000180093 Krtap19-4Q925H7 84 aa1.32□□□□□ -2.2
Ccr9-205ENSMUST00000180093 Fsip2A2ARZ3 6995 aa1.31□□□□□ -2.2
Ccr9-205ENSMUST00000180093 Mt4P47945 62 aa1.3□□□□□ -2.2
Ccr9-205ENSMUST00000180093 Sprr2hO70559 108 aa1.28□□□□□ -2.2
Ccr9-205ENSMUST00000180093 Muc19Q6PZE0 7524 aa1.23□□□□□ -2.21
Ccr9-205ENSMUST00000180093 DstQ91ZU6 7393 aaKnown RBP1.21□□□□□ -2.22
Ccr9-205ENSMUST00000180093 Krtap6-5Q925H3 78 aa1.2□□□□□ -2.22
Ccr9-205ENSMUST00000180093 Krtap6-3A0A087WQL6 57 aa1.16□□□□□ -2.22
Ccr9-205ENSMUST00000180093 NebE9Q1W3 7152 aa1.14□□□□□ -2.23
Ccr9-205ENSMUST00000180093 Krtap20-2E9Q0A8 60 aa1.13□□□□□ -2.23
Ccr9-205ENSMUST00000180093 Mt1P02802 61 aaKnown RBP1.11□□□□□ -2.23
Ccr9-205ENSMUST00000180093 AhnakE9Q616 5656 aaKnown RBP1.05□□□□□ -2.24
Ccr9-205ENSMUST00000180093 Sprr2bO70554 98 aa0.91□□□□□ -2.26
Ccr9-205ENSMUST00000180093 Phgr1Q8K0G7 91 aa0.89□□□□□ -2.27
Ccr9-205ENSMUST00000180093 Krtap6-2O08884 159 aa0.86□□□□□ -2.27
Ccr9-205ENSMUST00000180093 1110025L11RikO09048 78 aa0.84□□□□□ -2.28
Ccr9-205ENSMUST00000180093 Gm10229O08631 77 aa0.78□□□□□ -2.28
Ccr9-205ENSMUST00000180093 Krtap21-1Q925H4 128 aa0.68□□□□□ -2.3
Retrieved 80 of 22,080 RNA–protein pairs in 70.3 ms