RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Herc1E9PZP8 4859 aa5,67□□□□□ -1,5
Sort1-203ENSMUST00000135636 Sprr2dO70555 85 aa5,63□□□□□ -1,51
Sort1-203ENSMUST00000135636 Gm11562A0PK51 136 aa5,59□□□□□ -1,51
Sort1-203ENSMUST00000135636 PcloQ9QYX7 5068 aa5,58□□□□□ -1,52
Sort1-203ENSMUST00000135636 Gm11554B1AQB2 190 aa5,51□□□□□ -1,53
Sort1-203ENSMUST00000135636 Sprr2bO70554 98 aa5,46□□□□□ -1,54
Sort1-203ENSMUST00000135636 HydinQ80W93 5154 aa5,43□□□□□ -1,54
Sort1-203ENSMUST00000135636 Gm11938Q9D3H4 131 aa5,43□□□□□ -1,54
Sort1-203ENSMUST00000135636 Fsip2A2ARZ3 6995 aa5,41□□□□□ -1,54
Sort1-203ENSMUST00000135636 Syne2Q6ZWQ0 6874 aaKnown RBP5,4□□□□□ -1,55
Sort1-203ENSMUST00000135636 Kiaa1109A2AAE1 5005 aa5,37□□□□□ -1,55
Sort1-203ENSMUST00000135636 Mt3P28184 68 aa5,37□□□□□ -1,55
Sort1-203ENSMUST00000135636 Birc6O88738 4882 aa5,32□□□□□ -1,56
Sort1-203ENSMUST00000135636 Krtap6-3A0A087WQL6 57 aa5,31□□□□□ -1,56
Sort1-203ENSMUST00000135636 Krtap31-1Q9D644 177 aa5,31□□□□□ -1,56
Sort1-203ENSMUST00000135636 4932415D10RikA0A1W2P6U8 4986 aa5,14□□□□□ -1,59
Sort1-203ENSMUST00000135636 ZanO88799 5376 aa5,11□□□□□ -1,59
Sort1-203ENSMUST00000135636 Krtap4-16Q91W93 202 aa5,11□□□□□ -1,59
Sort1-203ENSMUST00000135636 Muc5bE9Q5I3 4800 aa5,1□□□□□ -1,59
Sort1-203ENSMUST00000135636 Mdn1A2ANY6 5589 aaKnown RBP5,07□□□□□ -1,6
Sort1-203ENSMUST00000135636 Abca13Q5SSE9 5034 aa5,07□□□□□ -1,6
Sort1-203ENSMUST00000135636 Hmcn2A2AJ76 5100 aa5,03□□□□□ -1,6
Sort1-203ENSMUST00000135636 Krtap20-2E9Q0A8 60 aa4,98□□□□□ -1,61
Sort1-203ENSMUST00000135636 Fat4Q2PZL6 4981 aa4,97□□□□□ -1,61
Sort1-203ENSMUST00000135636 Ubr4A2AN08 5180 aa4,89□□□□□ -1,63
Sort1-203ENSMUST00000135636 Krtap31-2Q8CAY5 177 aa4,83□□□□□ -1,64
Sort1-203ENSMUST00000135636 Mt1P02802 61 aaKnown RBP4,72□□□□□ -1,65
Sort1-203ENSMUST00000135636 Rnf213E9Q555 5152 aaKnown RBP4,59□□□□□ -1,67
Sort1-203ENSMUST00000135636 Ush2AQ2QI47 5193 aa4,56□□□□□ -1,68
Sort1-203ENSMUST00000135636 SspoQ8CG65 4998 aa4,43□□□□□ -1,7
Sort1-203ENSMUST00000135636 Gm11555B1AQ89 175 aa4,32□□□□□ -1,72
Sort1-203ENSMUST00000135636 Syne1Q6ZWR6 8799 aa4,31□□□□□ -1,72
Sort1-203ENSMUST00000135636 Eppk1Q8R0W0 6548 aa4,02□□□□□ -1,77
Sort1-203ENSMUST00000135636 NebE9Q1W3 7152 aa3,86□□□□□ -1,79
Sort1-203ENSMUST00000135636 Gm11559Q9D3H7 191 aa3,85□□□□□ -1,79
Sort1-203ENSMUST00000135636 DstQ91ZU6 7393 aaKnown RBP3,82□□□□□ -1,8
Sort1-203ENSMUST00000135636 1110025L11RikO09048 78 aa3,8□□□□□ -1,8
Sort1-203ENSMUST00000135636 Krtap6-5Q925H3 78 aa3,8□□□□□ -1,8
Sort1-203ENSMUST00000135636 Muc16A0A140LJ72 8478 aa3,77□□□□□ -1,81
Sort1-203ENSMUST00000135636 Gm10229O08631 77 aa3,73□□□□□ -1,81
Sort1-203ENSMUST00000135636 Macf1Q9QXZ0 7354 aaKnown RBP3,66□□□□□ -1,82
Sort1-203ENSMUST00000135636 Gm11568A2A4M2 211 aa3,65□□□□□ -1,83
Sort1-203ENSMUST00000135636 Krtap9-1Q64526 186 aa3,65□□□□□ -1,83
Sort1-203ENSMUST00000135636 ObscnA2AAJ9 8891 aaKnown RBP3,6□□□□□ -1,83
Sort1-203ENSMUST00000135636 Phgr1Q8K0G7 91 aa3,56□□□□□ -1,84
Sort1-203ENSMUST00000135636 Muc19Q6PZE0 7524 aa3,44□□□□□ -1,86
Sort1-203ENSMUST00000135636 Kmt2dQ6PDK2 5588 aa3,4□□□□□ -1,87
Sort1-203ENSMUST00000135636 Krtap6-2O08884 159 aa2,95□□□□□ -1,94
Sort1-203ENSMUST00000135636 Krtap5-2Q9D5Z7 189 aa2,88□□□□□ -1,95
Sort1-203ENSMUST00000135636 Gpr98Q8VHN7 6298 aaKnown RBP2,78□□□□□ -1,96
Sort1-203ENSMUST00000135636 Gm2431E9Q8S1 172 aa2,74□□□□□ -1,97
Sort1-203ENSMUST00000135636 Gm4553A0A1B0GSA9 284 aa2,73□□□□□ -1,97
Sort1-203ENSMUST00000135636 Gm11639A0A1D5RLM8 5808 aa2,66□□□□□ -1,98
Sort1-203ENSMUST00000135636 Krtap21-1Q925H4 128 aa2,56□□□□□ -2
Sort1-203ENSMUST00000135636 A030005L19RikA0A1Y7VIU2 113 aa2,48□□□□□ -2,01
Sort1-203ENSMUST00000135636 Gm11567Q9D141 195 aa2,45□□□□□ -2,02
Sort1-203ENSMUST00000135636 Hmcn1D3YXG0 5634 aa2,42□□□□□ -2,02
Sort1-203ENSMUST00000135636 Gm10153A0A1B0GRL1 320 aa2,29□□□□□ -2,04
Sort1-203ENSMUST00000135636 AhnakE9Q616 5656 aaKnown RBP2,18□□□□□ -2,06
Sort1-203ENSMUST00000135636 Gm45337A0A1B0GS71 263 aa2,14□□□□□ -2,07
Sort1-203ENSMUST00000135636 Gm40460A0A1B0GR10 244 aa2,03□□□□□ -2,08
Sort1-203ENSMUST00000135636 Gm7579A0A1B0GRJ4 243 aa2,03□□□□□ -2,08
Sort1-203ENSMUST00000135636 Krtap5-5Q2TA51 241 aa2,03□□□□□ -2,08
Sort1-203ENSMUST00000135636 Krtap5-4Q62220 223 aa2,03□□□□□ -2,08
Sort1-203ENSMUST00000135636 Gm39115A0A1B0GSH7 232 aa2,02□□□□□ -2,09
Sort1-203ENSMUST00000135636 A0A1Y7VLE6 161 aa2□□□□□ -2,09
Sort1-203ENSMUST00000135636 A030003K21RikA0A1Y7VIM3 128 aa1,86□□□□□ -2,11
Sort1-203ENSMUST00000135636 Krtap5-1Q64507 230 aa1,82□□□□□ -2,12
Sort1-203ENSMUST00000135636 A0A1Y7VJH8 109 aa1,8□□□□□ -2,12
Sort1-203ENSMUST00000135636 Gm6217A0A1Y7VJK9 128 aa1,74□□□□□ -2,13
Sort1-203ENSMUST00000135636 Gm45618A0A1B0GSA0 219 aa1,6□□□□□ -2,15
Sort1-203ENSMUST00000135636 Krtap28-10A0A1Y7VP58 119 aa1,6□□□□□ -2,15
Sort1-203ENSMUST00000135636 A030005K14RikA0A1Y7VNY1 122 aa1,59□□□□□ -2,16
Sort1-203ENSMUST00000135636 A0A1Y7VJ07 166 aa1,55□□□□□ -2,16
Sort1-203ENSMUST00000135636 Gm29735A0A1B0GT06 219 aa1,47□□□□□ -2,17
Sort1-203ENSMUST00000135636 Krtap28-13A0A087WQP5 138 aa1,46□□□□□ -2,18
Sort1-203ENSMUST00000135636 A0A286YCP9 139 aa1,45□□□□□ -2,18
Sort1-203ENSMUST00000135636 Gm7544A0A1Y7VJ58 118 aa1,45□□□□□ -2,18
Sort1-203ENSMUST00000135636 A030014E15RikA0A1Y7VJV2 120 aa1,18□□□□□ -2,22
Sort1-203ENSMUST00000135636 Gm4559A4IF42 199 aa0,93□□□□□ -2,26
Retrieved 80 of 22,080 RNA–protein pairs in 52,2 ms