RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Herc1E9PZP8 4859 aa5.67□□□□□ -1.5
Sort1-203ENSMUST00000135636 Sprr2dO70555 85 aa5.63□□□□□ -1.51
Sort1-203ENSMUST00000135636 Gm11562A0PK51 136 aa5.59□□□□□ -1.51
Sort1-203ENSMUST00000135636 PcloQ9QYX7 5068 aa5.58□□□□□ -1.52
Sort1-203ENSMUST00000135636 Gm11554B1AQB2 190 aa5.51□□□□□ -1.53
Sort1-203ENSMUST00000135636 Sprr2bO70554 98 aa5.46□□□□□ -1.54
Sort1-203ENSMUST00000135636 HydinQ80W93 5154 aa5.43□□□□□ -1.54
Sort1-203ENSMUST00000135636 Gm11938Q9D3H4 131 aa5.43□□□□□ -1.54
Sort1-203ENSMUST00000135636 Fsip2A2ARZ3 6995 aa5.41□□□□□ -1.54
Sort1-203ENSMUST00000135636 Syne2Q6ZWQ0 6874 aaKnown RBP5.4□□□□□ -1.55
Sort1-203ENSMUST00000135636 Kiaa1109A2AAE1 5005 aa5.37□□□□□ -1.55
Sort1-203ENSMUST00000135636 Mt3P28184 68 aa5.37□□□□□ -1.55
Sort1-203ENSMUST00000135636 Birc6O88738 4882 aa5.32□□□□□ -1.56
Sort1-203ENSMUST00000135636 Krtap6-3A0A087WQL6 57 aa5.31□□□□□ -1.56
Sort1-203ENSMUST00000135636 Krtap31-1Q9D644 177 aa5.31□□□□□ -1.56
Sort1-203ENSMUST00000135636 4932415D10RikA0A1W2P6U8 4986 aa5.14□□□□□ -1.59
Sort1-203ENSMUST00000135636 ZanO88799 5376 aa5.11□□□□□ -1.59
Sort1-203ENSMUST00000135636 Krtap4-16Q91W93 202 aa5.11□□□□□ -1.59
Sort1-203ENSMUST00000135636 Muc5bE9Q5I3 4800 aa5.1□□□□□ -1.59
Sort1-203ENSMUST00000135636 Mdn1A2ANY6 5589 aaKnown RBP5.07□□□□□ -1.6
Sort1-203ENSMUST00000135636 Abca13Q5SSE9 5034 aa5.07□□□□□ -1.6
Sort1-203ENSMUST00000135636 Hmcn2A2AJ76 5100 aa5.03□□□□□ -1.6
Sort1-203ENSMUST00000135636 Krtap20-2E9Q0A8 60 aa4.98□□□□□ -1.61
Sort1-203ENSMUST00000135636 Fat4Q2PZL6 4981 aa4.97□□□□□ -1.61
Sort1-203ENSMUST00000135636 Ubr4A2AN08 5180 aa4.89□□□□□ -1.63
Sort1-203ENSMUST00000135636 Krtap31-2Q8CAY5 177 aa4.83□□□□□ -1.64
Sort1-203ENSMUST00000135636 Mt1P02802 61 aaKnown RBP4.72□□□□□ -1.65
Sort1-203ENSMUST00000135636 Rnf213E9Q555 5152 aaKnown RBP4.59□□□□□ -1.67
Sort1-203ENSMUST00000135636 Ush2AQ2QI47 5193 aa4.56□□□□□ -1.68
Sort1-203ENSMUST00000135636 SspoQ8CG65 4998 aa4.43□□□□□ -1.7
Sort1-203ENSMUST00000135636 Gm11555B1AQ89 175 aa4.32□□□□□ -1.72
Sort1-203ENSMUST00000135636 Syne1Q6ZWR6 8799 aa4.31□□□□□ -1.72
Sort1-203ENSMUST00000135636 Eppk1Q8R0W0 6548 aa4.02□□□□□ -1.77
Sort1-203ENSMUST00000135636 NebE9Q1W3 7152 aa3.86□□□□□ -1.79
Sort1-203ENSMUST00000135636 Gm11559Q9D3H7 191 aa3.85□□□□□ -1.79
Sort1-203ENSMUST00000135636 DstQ91ZU6 7393 aaKnown RBP3.82□□□□□ -1.8
Sort1-203ENSMUST00000135636 1110025L11RikO09048 78 aa3.8□□□□□ -1.8
Sort1-203ENSMUST00000135636 Krtap6-5Q925H3 78 aa3.8□□□□□ -1.8
Sort1-203ENSMUST00000135636 Muc16A0A140LJ72 8478 aa3.77□□□□□ -1.81
Sort1-203ENSMUST00000135636 Gm10229O08631 77 aa3.73□□□□□ -1.81
Sort1-203ENSMUST00000135636 Macf1Q9QXZ0 7354 aaKnown RBP3.66□□□□□ -1.82
Sort1-203ENSMUST00000135636 Gm11568A2A4M2 211 aa3.65□□□□□ -1.83
Sort1-203ENSMUST00000135636 Krtap9-1Q64526 186 aa3.65□□□□□ -1.83
Sort1-203ENSMUST00000135636 ObscnA2AAJ9 8891 aaKnown RBP3.6□□□□□ -1.83
Sort1-203ENSMUST00000135636 Phgr1Q8K0G7 91 aa3.56□□□□□ -1.84
Sort1-203ENSMUST00000135636 Muc19Q6PZE0 7524 aa3.44□□□□□ -1.86
Sort1-203ENSMUST00000135636 Kmt2dQ6PDK2 5588 aa3.4□□□□□ -1.87
Sort1-203ENSMUST00000135636 Krtap6-2O08884 159 aa2.95□□□□□ -1.94
Sort1-203ENSMUST00000135636 Krtap5-2Q9D5Z7 189 aa2.88□□□□□ -1.95
Sort1-203ENSMUST00000135636 Gpr98Q8VHN7 6298 aaKnown RBP2.78□□□□□ -1.96
Sort1-203ENSMUST00000135636 Gm2431E9Q8S1 172 aa2.74□□□□□ -1.97
Sort1-203ENSMUST00000135636 Gm4553A0A1B0GSA9 284 aa2.73□□□□□ -1.97
Sort1-203ENSMUST00000135636 Gm11639A0A1D5RLM8 5808 aa2.66□□□□□ -1.98
Sort1-203ENSMUST00000135636 Krtap21-1Q925H4 128 aa2.56□□□□□ -2
Sort1-203ENSMUST00000135636 A030005L19RikA0A1Y7VIU2 113 aa2.48□□□□□ -2.01
Sort1-203ENSMUST00000135636 Gm11567Q9D141 195 aa2.45□□□□□ -2.02
Sort1-203ENSMUST00000135636 Hmcn1D3YXG0 5634 aa2.42□□□□□ -2.02
Sort1-203ENSMUST00000135636 Gm10153A0A1B0GRL1 320 aa2.29□□□□□ -2.04
Sort1-203ENSMUST00000135636 AhnakE9Q616 5656 aaKnown RBP2.18□□□□□ -2.06
Sort1-203ENSMUST00000135636 Gm45337A0A1B0GS71 263 aa2.14□□□□□ -2.07
Sort1-203ENSMUST00000135636 Gm40460A0A1B0GR10 244 aa2.03□□□□□ -2.08
Sort1-203ENSMUST00000135636 Gm7579A0A1B0GRJ4 243 aa2.03□□□□□ -2.08
Sort1-203ENSMUST00000135636 Krtap5-5Q2TA51 241 aa2.03□□□□□ -2.08
Sort1-203ENSMUST00000135636 Krtap5-4Q62220 223 aa2.03□□□□□ -2.08
Sort1-203ENSMUST00000135636 Gm39115A0A1B0GSH7 232 aa2.02□□□□□ -2.09
Sort1-203ENSMUST00000135636 A0A1Y7VLE6 161 aa2□□□□□ -2.09
Sort1-203ENSMUST00000135636 A030003K21RikA0A1Y7VIM3 128 aa1.86□□□□□ -2.11
Sort1-203ENSMUST00000135636 Krtap5-1Q64507 230 aa1.82□□□□□ -2.12
Sort1-203ENSMUST00000135636 A0A1Y7VJH8 109 aa1.8□□□□□ -2.12
Sort1-203ENSMUST00000135636 Gm6217A0A1Y7VJK9 128 aa1.74□□□□□ -2.13
Sort1-203ENSMUST00000135636 Gm45618A0A1B0GSA0 219 aa1.6□□□□□ -2.15
Sort1-203ENSMUST00000135636 Krtap28-10A0A1Y7VP58 119 aa1.6□□□□□ -2.15
Sort1-203ENSMUST00000135636 A030005K14RikA0A1Y7VNY1 122 aa1.59□□□□□ -2.16
Sort1-203ENSMUST00000135636 A0A1Y7VJ07 166 aa1.55□□□□□ -2.16
Sort1-203ENSMUST00000135636 Gm29735A0A1B0GT06 219 aa1.47□□□□□ -2.17
Sort1-203ENSMUST00000135636 Krtap28-13A0A087WQP5 138 aa1.46□□□□□ -2.18
Sort1-203ENSMUST00000135636 A0A286YCP9 139 aa1.45□□□□□ -2.18
Sort1-203ENSMUST00000135636 Gm7544A0A1Y7VJ58 118 aa1.45□□□□□ -2.18
Sort1-203ENSMUST00000135636 A030014E15RikA0A1Y7VJV2 120 aa1.18□□□□□ -2.22
Sort1-203ENSMUST00000135636 Gm4559A4IF42 199 aa0.93□□□□□ -2.26
Retrieved 80 of 22,080 RNA–protein pairs in 8.8 ms