RNA–Protein interactions for RNA: ENSMUST00000129269.7

Stag1-206, Transcript of Cohesin subunit SA-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Stag1, Length 6,186 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1-206ENSMUST00000129269 Krtap4-7Q9D732 168 aa4.59□□□□□ -1.67
Stag1-206ENSMUST00000129269 Krtap4-13Q9D7P3 165 aa4.57□□□□□ -1.68
Stag1-206ENSMUST00000129269 Fsip2A2ARZ3 6995 aa4.5□□□□□ -1.69
Stag1-206ENSMUST00000129269 Abca13Q5SSE9 5034 aa4.49□□□□□ -1.69
Stag1-206ENSMUST00000129269 Fat4Q2PZL6 4981 aa4.47□□□□□ -1.69
Stag1-206ENSMUST00000129269 Lce1a2Q9D1K4 149 aa4.46□□□□□ -1.7
Stag1-206ENSMUST00000129269 Ubr4A2AN08 5180 aa4.46□□□□□ -1.7
Stag1-206ENSMUST00000129269 Krtap17-1A2A5X6 109 aa4.43□□□□□ -1.7
Stag1-206ENSMUST00000129269 Syne2Q6ZWQ0 6874 aaKnown RBP4.42□□□□□ -1.7
Stag1-206ENSMUST00000129269 ZanO88799 5376 aa4.41□□□□□ -1.7
Stag1-206ENSMUST00000129269 Muc5bE9Q5I3 4800 aa4.37□□□□□ -1.71
Stag1-206ENSMUST00000129269 Lce1kJ3QP15 125 aa4.33□□□□□ -1.72
Stag1-206ENSMUST00000129269 Lce1a1Q9CQH5 143 aa4.29□□□□□ -1.72
Stag1-206ENSMUST00000129269 Sprr2hO70559 108 aa4.29□□□□□ -1.72
Stag1-206ENSMUST00000129269 Rnf213E9Q555 5152 aaKnown RBP4.27□□□□□ -1.73
Stag1-206ENSMUST00000129269 Ush2AQ2QI47 5193 aa4.23□□□□□ -1.73
Stag1-206ENSMUST00000129269 Gm11562A0PK51 136 aa4.22□□□□□ -1.73
Stag1-206ENSMUST00000129269 Syne1Q6ZWR6 8799 aa4.18□□□□□ -1.74
Stag1-206ENSMUST00000129269 Hmcn2A2AJ76 5100 aa4.17□□□□□ -1.74
Stag1-206ENSMUST00000129269 Krtap6-3A0A087WQL6 57 aa4.15□□□□□ -1.74
Stag1-206ENSMUST00000129269 Gm11554B1AQB2 190 aa4.14□□□□□ -1.75
Stag1-206ENSMUST00000129269 Gm11938Q9D3H4 131 aa4.12□□□□□ -1.75
Stag1-206ENSMUST00000129269 Sprr2dO70555 85 aa4.06□□□□□ -1.76
Stag1-206ENSMUST00000129269 Mt3P28184 68 aa4.06□□□□□ -1.76
Stag1-206ENSMUST00000129269 Krtap31-1Q9D644 177 aa4□□□□□ -1.77
Stag1-206ENSMUST00000129269 Sprr2bO70554 98 aa3.89□□□□□ -1.79
Stag1-206ENSMUST00000129269 SspoQ8CG65 4998 aa3.89□□□□□ -1.79
Stag1-206ENSMUST00000129269 Krtap20-2E9Q0A8 60 aa3.86□□□□□ -1.79
Stag1-206ENSMUST00000129269 Krtap4-16Q91W93 202 aa3.75□□□□□ -1.81
Stag1-206ENSMUST00000129269 Macf1Q9QXZ0 7354 aaKnown RBP3.68□□□□□ -1.82
Stag1-206ENSMUST00000129269 Mt1P02802 61 aaKnown RBP3.62□□□□□ -1.83
Stag1-206ENSMUST00000129269 Muc16A0A140LJ72 8478 aa3.6□□□□□ -1.83
Stag1-206ENSMUST00000129269 NebE9Q1W3 7152 aa3.57□□□□□ -1.84
Stag1-206ENSMUST00000129269 Eppk1Q8R0W0 6548 aa3.57□□□□□ -1.84
Stag1-206ENSMUST00000129269 Gm11555B1AQ89 175 aa3.49□□□□□ -1.85
Stag1-206ENSMUST00000129269 Krtap31-2Q8CAY5 177 aa3.46□□□□□ -1.86
Stag1-206ENSMUST00000129269 DstQ91ZU6 7393 aaKnown RBP3.45□□□□□ -1.86
Stag1-206ENSMUST00000129269 A0A1Y7VLE6 161 aa3.39□□□□□ -1.87
Stag1-206ENSMUST00000129269 ObscnA2AAJ9 8891 aaKnown RBP3.36□□□□□ -1.87
Stag1-206ENSMUST00000129269 Kmt2dQ6PDK2 5588 aa3.29□□□□□ -1.88
Stag1-206ENSMUST00000129269 Muc19Q6PZE0 7524 aa3.18□□□□□ -1.9
Stag1-206ENSMUST00000129269 A030003K21RikA0A1Y7VIM3 128 aa3.1□□□□□ -1.91
Stag1-206ENSMUST00000129269 Gm11559Q9D3H7 191 aa3.07□□□□□ -1.92
Stag1-206ENSMUST00000129269 Krtap28-10A0A1Y7VP58 119 aa3.03□□□□□ -1.92
Stag1-206ENSMUST00000129269 Krtap28-13A0A087WQP5 138 aa2.97□□□□□ -1.93
Stag1-206ENSMUST00000129269 A0A1Y7VJ07 166 aa2.96□□□□□ -1.94
Stag1-206ENSMUST00000129269 A0A1Y7VJH8 109 aa2.96□□□□□ -1.94
Stag1-206ENSMUST00000129269 1110025L11RikO09048 78 aa2.94□□□□□ -1.94
Stag1-206ENSMUST00000129269 Krtap6-5Q925H3 78 aa2.94□□□□□ -1.94
Stag1-206ENSMUST00000129269 Gm6217A0A1Y7VJK9 128 aa2.92□□□□□ -1.94
Stag1-206ENSMUST00000129269 Gm11568A2A4M2 211 aa2.92□□□□□ -1.94
Stag1-206ENSMUST00000129269 Krtap9-1Q64526 186 aa2.92□□□□□ -1.94
Stag1-206ENSMUST00000129269 A030005K14RikA0A1Y7VNY1 122 aa2.92□□□□□ -1.94
Stag1-206ENSMUST00000129269 Gm10229O08631 77 aa2.83□□□□□ -1.96
Stag1-206ENSMUST00000129269 Gpr98Q8VHN7 6298 aaKnown RBP2.82□□□□□ -1.96
Stag1-206ENSMUST00000129269 A030014E15RikA0A1Y7VJV2 120 aa2.8□□□□□ -1.96
Stag1-206ENSMUST00000129269 Gm7544A0A1Y7VJ58 118 aa2.8□□□□□ -1.96
Stag1-206ENSMUST00000129269 Gm11639A0A1D5RLM8 5808 aa2.77□□□□□ -1.97
Stag1-206ENSMUST00000129269 A030005L19RikA0A1Y7VIU2 113 aa2.76□□□□□ -1.97
Stag1-206ENSMUST00000129269 Phgr1Q8K0G7 91 aa2.6□□□□□ -1.99
Stag1-206ENSMUST00000129269 Hmcn1D3YXG0 5634 aa2.55□□□□□ -2
Stag1-206ENSMUST00000129269 Krtap5-2Q9D5Z7 189 aa2.52□□□□□ -2.01
Stag1-206ENSMUST00000129269 Gm4553A0A1B0GSA9 284 aa2.41□□□□□ -2.02
Stag1-206ENSMUST00000129269 Gm2431E9Q8S1 172 aa2.33□□□□□ -2.04
Stag1-206ENSMUST00000129269 Krtap6-2O08884 159 aa2.3□□□□□ -2.04
Stag1-206ENSMUST00000129269 AhnakE9Q616 5656 aaKnown RBP2.24□□□□□ -2.05
Stag1-206ENSMUST00000129269 A0A286YCP9 139 aa2.22□□□□□ -2.05
Stag1-206ENSMUST00000129269 Gm10153A0A1B0GRL1 320 aa2.09□□□□□ -2.07
Stag1-206ENSMUST00000129269 Krtap21-1Q925H4 128 aa2.03□□□□□ -2.08
Stag1-206ENSMUST00000129269 Gm45337A0A1B0GS71 263 aa1.98□□□□□ -2.09
Stag1-206ENSMUST00000129269 Gm40460A0A1B0GR10 244 aa1.92□□□□□ -2.1
Stag1-206ENSMUST00000129269 Gm7579A0A1B0GRJ4 243 aa1.92□□□□□ -2.1
Stag1-206ENSMUST00000129269 Krtap5-5Q2TA51 241 aa1.92□□□□□ -2.1
Stag1-206ENSMUST00000129269 Krtap5-4Q62220 223 aa1.92□□□□□ -2.1
Stag1-206ENSMUST00000129269 Gm11567Q9D141 195 aa1.9□□□□□ -2.11
Stag1-206ENSMUST00000129269 Gm39115A0A1B0GSH7 232 aa1.86□□□□□ -2.11
Stag1-206ENSMUST00000129269 Gm45618A0A1B0GSA0 219 aa1.59□□□□□ -2.16
Stag1-206ENSMUST00000129269 Krtap5-1Q64507 230 aa1.43□□□□□ -2.18
Stag1-206ENSMUST00000129269 Gm29735A0A1B0GT06 219 aa1.42□□□□□ -2.18
Stag1-206ENSMUST00000129269 Gm4559A4IF42 199 aa1.01□□□□□ -2.25
Retrieved 80 of 22,080 RNA–protein pairs in 81.6 ms