RNA–Protein interactions for RNA: ENSMUST00000129047.7

Rpusd3-204, Transcript of Mitochondrial mRNA pseudouridine synthase Rpusd3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Rpusd3, Length 1,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd3-204ENSMUST00000129047 Ndufb1P0DN34 57 aa6.89□□□□□ -1.31
Rpusd3-204ENSMUST00000129047 Gm2431E9Q8S1 172 aa6.83□□□□□ -1.32
Rpusd3-204ENSMUST00000129047 Gm10272F7CZ33 110 aa6.83□□□□□ -1.32
Rpusd3-204ENSMUST00000129047 Krtap7-1Q9D3I6 87 aa6.72□□□□□ -1.33
Rpusd3-204ENSMUST00000129047 Lce1fB9EJP6 147 aa6.71□□□□□ -1.34
Rpusd3-204ENSMUST00000129047 Lce1cQ9D1C5 147 aa6.71□□□□□ -1.34
Rpusd3-204ENSMUST00000129047 Gm3880A0A1B0GSB3 72 aa6.7□□□□□ -1.34
Rpusd3-204ENSMUST00000129047 Gm45337A0A1B0GS71 263 aa6.68□□□□□ -1.34
Rpusd3-204ENSMUST00000129047 Sox16Q62247 57 aa6.67□□□□□ -1.34
Rpusd3-204ENSMUST00000129047 Muc19Q6PZE0 7524 aa6.65□□□□□ -1.34
Rpusd3-204ENSMUST00000129047 Gpr98Q8VHN7 6298 aaKnown RBP6.58□□□□□ -1.36
Rpusd3-204ENSMUST00000129047 4933415A04RikQ9D443 101 aa6.5□□□□□ -1.37
Rpusd3-204ENSMUST00000129047 Gm10153A0A1B0GRL1 320 aa6.48□□□□□ -1.37
Rpusd3-204ENSMUST00000129047 Gm10337F7DEP7 55 aa6.47□□□□□ -1.37
Rpusd3-204ENSMUST00000129047 Hmcn1D3YXG0 5634 aa6.47□□□□□ -1.37
Rpusd3-204ENSMUST00000129047 H2al1kJ3QP08 105 aa6.46□□□□□ -1.38
Rpusd3-204ENSMUST00000129047 H2al1mQ9DAD9 105 aa6.46□□□□□ -1.38
Rpusd3-204ENSMUST00000129047 Krtap19-4Q925H7 84 aa6.44□□□□□ -1.38
Rpusd3-204ENSMUST00000129047 Gm40460A0A1B0GR10 244 aa6.43□□□□□ -1.38
Rpusd3-204ENSMUST00000129047 Gm7579A0A1B0GRJ4 243 aa6.43□□□□□ -1.38
Rpusd3-204ENSMUST00000129047 Krtap5-5Q2TA51 241 aa6.43□□□□□ -1.38
Rpusd3-204ENSMUST00000129047 Krtap5-4Q62220 223 aa6.43□□□□□ -1.38
Rpusd3-204ENSMUST00000129047 Gm11938Q9D3H4 131 aa6.41□□□□□ -1.38
Rpusd3-204ENSMUST00000129047 Mt1P02802 61 aaKnown RBP6.39□□□□□ -1.39
Rpusd3-204ENSMUST00000129047 Gm39115A0A1B0GSH7 232 aa6.37□□□□□ -1.39
Rpusd3-204ENSMUST00000129047 Gm12216A0A1W2P827 62 aa6.27□□□□□ -1.41
Rpusd3-204ENSMUST00000129047 DstQ91ZU6 7393 aaKnown RBP6.27□□□□□ -1.41
Rpusd3-204ENSMUST00000129047 SvipQ3UZP4 77 aa6.24□□□□□ -1.41
Rpusd3-204ENSMUST00000129047 Gm3646F6S692 53 aa6.19□□□□□ -1.42
Rpusd3-204ENSMUST00000129047 Lce3cQ91V05 98 aa6.13□□□□□ -1.43
Rpusd3-204ENSMUST00000129047 Ndufs5Q99LY9 106 aa6.13□□□□□ -1.43
Rpusd3-204ENSMUST00000129047 NebE9Q1W3 7152 aa6.13□□□□□ -1.43
Rpusd3-204ENSMUST00000129047 Krtap4-16Q91W93 202 aa6.12□□□□□ -1.43
Rpusd3-204ENSMUST00000129047 Romo1P60603 79 aa6.1□□□□□ -1.43
Rpusd3-204ENSMUST00000129047 Lce3dE9Q8V1 98 aa6.02□□□□□ -1.45
Rpusd3-204ENSMUST00000129047 Gm45618A0A1B0GSA0 219 aa5.98□□□□□ -1.45
Rpusd3-204ENSMUST00000129047 Tnp1P10856 55 aa5.97□□□□□ -1.45
Rpusd3-204ENSMUST00000129047 Sprr2fO70557 76 aa5.95□□□□□ -1.46
Rpusd3-204ENSMUST00000129047 Mt3P28184 68 aa5.93□□□□□ -1.46
Rpusd3-204ENSMUST00000129047 ObscnA2AAJ9 8891 aaKnown RBP5.85□□□□□ -1.47
Rpusd3-204ENSMUST00000129047 AhnakE9Q616 5656 aaKnown RBP5.83□□□□□ -1.48
Rpusd3-204ENSMUST00000129047 Lce3eF8VQJ0 98 aa5.8□□□□□ -1.48
Rpusd3-204ENSMUST00000129047 Lce3fQ6PAI4 98 aa5.8□□□□□ -1.48
Rpusd3-204ENSMUST00000129047 A0A1Y7VLE6 161 aa5.65□□□□□ -1.5
Rpusd3-204ENSMUST00000129047 Gm10100J3QK64 120 aa5.58□□□□□ -1.52
Rpusd3-204ENSMUST00000129047 4933428G20RikQ9D3X4 101 aa5.57□□□□□ -1.52
Rpusd3-204ENSMUST00000129047 Gm40193A0A1B0GT39 78 aa5.54□□□□□ -1.52
Rpusd3-204ENSMUST00000129047 Lce3aQ497I5 98 aa5.54□□□□□ -1.52
Rpusd3-204ENSMUST00000129047 Sprr2dO70555 85 aa5.29□□□□□ -1.56
Rpusd3-204ENSMUST00000129047 Sprr2eO70556 76 aa5.22□□□□□ -1.57
Rpusd3-204ENSMUST00000129047 Mp68P56379 58 aa5.06□□□□□ -1.6
Rpusd3-204ENSMUST00000129047 Gm10024A0A0A0MQA4 119 aa5.01□□□□□ -1.61
Rpusd3-204ENSMUST00000129047 A0A1Y7VJ07 166 aa4.84□□□□□ -1.63
Rpusd3-204ENSMUST00000129047 Sprr2hO70559 108 aa4.79□□□□□ -1.64
Rpusd3-204ENSMUST00000129047 Muc16A0A140LJ72 8478 aa4.76□□□□□ -1.65
Rpusd3-204ENSMUST00000129047 Gm10142J3KMP7 120 aa4.71□□□□□ -1.66
Rpusd3-204ENSMUST00000129047 Gm29735A0A1B0GT06 219 aa4.7□□□□□ -1.66
Rpusd3-204ENSMUST00000129047 Gm20538F6Z9R1 75 aa4.55□□□□□ -1.68
Rpusd3-204ENSMUST00000129047 1110025L11RikO09048 78 aa4.51□□□□□ -1.69
Rpusd3-204ENSMUST00000129047 Krtap6-5Q925H3 78 aa4.51□□□□□ -1.69
Rpusd3-204ENSMUST00000129047 Gm11567Q9D141 195 aa4.46□□□□□ -1.7
Rpusd3-204ENSMUST00000129047 Ndufaf8A2AMZ4 74 aa4.26□□□□□ -1.73
Rpusd3-204ENSMUST00000129047 Gm10229O08631 77 aa4.07□□□□□ -1.76
Rpusd3-204ENSMUST00000129047 A030003K21RikA0A1Y7VIM3 128 aa3.96□□□□□ -1.78
Rpusd3-204ENSMUST00000129047 Sprr2bO70554 98 aa3.74□□□□□ -1.81
Rpusd3-204ENSMUST00000129047 Krtap5-1Q64507 230 aa3.74□□□□□ -1.81
Rpusd3-204ENSMUST00000129047 Krtap31-2Q8CAY5 177 aa3.74□□□□□ -1.81
Rpusd3-204ENSMUST00000129047 Krtap31-1Q9D644 177 aa3.71□□□□□ -1.82
Rpusd3-204ENSMUST00000129047 Krtap6-2O08884 159 aa3.66□□□□□ -1.82
Rpusd3-204ENSMUST00000129047 Krtap21-1Q925H4 128 aa3.64□□□□□ -1.83
Rpusd3-204ENSMUST00000129047 Krtap28-10A0A1Y7VP58 119 aa3.58□□□□□ -1.84
Rpusd3-204ENSMUST00000129047 Gm9112A2AI92 75 aa3.58□□□□□ -1.84
Rpusd3-204ENSMUST00000129047 Krtap28-13A0A087WQP5 138 aa3.38□□□□□ -1.87
Rpusd3-204ENSMUST00000129047 A030005K14RikA0A1Y7VNY1 122 aa3.35□□□□□ -1.87
Rpusd3-204ENSMUST00000129047 A0A286YCP9 139 aa3.28□□□□□ -1.88
Rpusd3-204ENSMUST00000129047 A030014E15RikA0A1Y7VJV2 120 aa3.18□□□□□ -1.9
Rpusd3-204ENSMUST00000129047 Gm6217A0A1Y7VJK9 128 aa2.97□□□□□ -1.93
Rpusd3-204ENSMUST00000129047 Gm7544A0A1Y7VJ58 118 aa2.96□□□□□ -1.94
Rpusd3-204ENSMUST00000129047 Phgr1Q8K0G7 91 aa2.93□□□□□ -1.94
Rpusd3-204ENSMUST00000129047 Gm4559A4IF42 199 aa2.75□□□□□ -1.97
Retrieved 80 of 22,080 RNA–protein pairs in 114.4 ms