RNA–Protein interactions for RNA: ENSMUST00000129047.7

Rpusd3-204, Transcript of Mitochondrial mRNA pseudouridine synthase Rpusd3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Rpusd3, Length 1,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd3-204ENSMUST00000129047 Ndufb1P0DN34 57 aa6,89□□□□□ -1,31
Rpusd3-204ENSMUST00000129047 Gm2431E9Q8S1 172 aa6,83□□□□□ -1,32
Rpusd3-204ENSMUST00000129047 Gm10272F7CZ33 110 aa6,83□□□□□ -1,32
Rpusd3-204ENSMUST00000129047 Krtap7-1Q9D3I6 87 aa6,72□□□□□ -1,33
Rpusd3-204ENSMUST00000129047 Lce1fB9EJP6 147 aa6,71□□□□□ -1,34
Rpusd3-204ENSMUST00000129047 Lce1cQ9D1C5 147 aa6,71□□□□□ -1,34
Rpusd3-204ENSMUST00000129047 Gm3880A0A1B0GSB3 72 aa6,7□□□□□ -1,34
Rpusd3-204ENSMUST00000129047 Gm45337A0A1B0GS71 263 aa6,68□□□□□ -1,34
Rpusd3-204ENSMUST00000129047 Sox16Q62247 57 aa6,67□□□□□ -1,34
Rpusd3-204ENSMUST00000129047 Muc19Q6PZE0 7524 aa6,65□□□□□ -1,34
Rpusd3-204ENSMUST00000129047 Gpr98Q8VHN7 6298 aaKnown RBP6,58□□□□□ -1,36
Rpusd3-204ENSMUST00000129047 4933415A04RikQ9D443 101 aa6,5□□□□□ -1,37
Rpusd3-204ENSMUST00000129047 Gm10153A0A1B0GRL1 320 aa6,48□□□□□ -1,37
Rpusd3-204ENSMUST00000129047 Gm10337F7DEP7 55 aa6,47□□□□□ -1,37
Rpusd3-204ENSMUST00000129047 Hmcn1D3YXG0 5634 aa6,47□□□□□ -1,37
Rpusd3-204ENSMUST00000129047 H2al1kJ3QP08 105 aa6,46□□□□□ -1,38
Rpusd3-204ENSMUST00000129047 H2al1mQ9DAD9 105 aa6,46□□□□□ -1,38
Rpusd3-204ENSMUST00000129047 Krtap19-4Q925H7 84 aa6,44□□□□□ -1,38
Rpusd3-204ENSMUST00000129047 Gm40460A0A1B0GR10 244 aa6,43□□□□□ -1,38
Rpusd3-204ENSMUST00000129047 Gm7579A0A1B0GRJ4 243 aa6,43□□□□□ -1,38
Rpusd3-204ENSMUST00000129047 Krtap5-5Q2TA51 241 aa6,43□□□□□ -1,38
Rpusd3-204ENSMUST00000129047 Krtap5-4Q62220 223 aa6,43□□□□□ -1,38
Rpusd3-204ENSMUST00000129047 Gm11938Q9D3H4 131 aa6,41□□□□□ -1,38
Rpusd3-204ENSMUST00000129047 Mt1P02802 61 aaKnown RBP6,39□□□□□ -1,39
Rpusd3-204ENSMUST00000129047 Gm39115A0A1B0GSH7 232 aa6,37□□□□□ -1,39
Rpusd3-204ENSMUST00000129047 Gm12216A0A1W2P827 62 aa6,27□□□□□ -1,41
Rpusd3-204ENSMUST00000129047 DstQ91ZU6 7393 aaKnown RBP6,27□□□□□ -1,41
Rpusd3-204ENSMUST00000129047 SvipQ3UZP4 77 aa6,24□□□□□ -1,41
Rpusd3-204ENSMUST00000129047 Gm3646F6S692 53 aa6,19□□□□□ -1,42
Rpusd3-204ENSMUST00000129047 Lce3cQ91V05 98 aa6,13□□□□□ -1,43
Rpusd3-204ENSMUST00000129047 Ndufs5Q99LY9 106 aa6,13□□□□□ -1,43
Rpusd3-204ENSMUST00000129047 NebE9Q1W3 7152 aa6,13□□□□□ -1,43
Rpusd3-204ENSMUST00000129047 Krtap4-16Q91W93 202 aa6,12□□□□□ -1,43
Rpusd3-204ENSMUST00000129047 Romo1P60603 79 aa6,1□□□□□ -1,43
Rpusd3-204ENSMUST00000129047 Lce3dE9Q8V1 98 aa6,02□□□□□ -1,45
Rpusd3-204ENSMUST00000129047 Gm45618A0A1B0GSA0 219 aa5,98□□□□□ -1,45
Rpusd3-204ENSMUST00000129047 Tnp1P10856 55 aa5,97□□□□□ -1,45
Rpusd3-204ENSMUST00000129047 Sprr2fO70557 76 aa5,95□□□□□ -1,46
Rpusd3-204ENSMUST00000129047 Mt3P28184 68 aa5,93□□□□□ -1,46
Rpusd3-204ENSMUST00000129047 ObscnA2AAJ9 8891 aaKnown RBP5,85□□□□□ -1,47
Rpusd3-204ENSMUST00000129047 AhnakE9Q616 5656 aaKnown RBP5,83□□□□□ -1,48
Rpusd3-204ENSMUST00000129047 Lce3eF8VQJ0 98 aa5,8□□□□□ -1,48
Rpusd3-204ENSMUST00000129047 Lce3fQ6PAI4 98 aa5,8□□□□□ -1,48
Rpusd3-204ENSMUST00000129047 A0A1Y7VLE6 161 aa5,65□□□□□ -1,5
Rpusd3-204ENSMUST00000129047 Gm10100J3QK64 120 aa5,58□□□□□ -1,52
Rpusd3-204ENSMUST00000129047 4933428G20RikQ9D3X4 101 aa5,57□□□□□ -1,52
Rpusd3-204ENSMUST00000129047 Gm40193A0A1B0GT39 78 aa5,54□□□□□ -1,52
Rpusd3-204ENSMUST00000129047 Lce3aQ497I5 98 aa5,54□□□□□ -1,52
Rpusd3-204ENSMUST00000129047 Sprr2dO70555 85 aa5,29□□□□□ -1,56
Rpusd3-204ENSMUST00000129047 Sprr2eO70556 76 aa5,22□□□□□ -1,57
Rpusd3-204ENSMUST00000129047 Mp68P56379 58 aa5,06□□□□□ -1,6
Rpusd3-204ENSMUST00000129047 Gm10024A0A0A0MQA4 119 aa5,01□□□□□ -1,61
Rpusd3-204ENSMUST00000129047 A0A1Y7VJ07 166 aa4,84□□□□□ -1,63
Rpusd3-204ENSMUST00000129047 Sprr2hO70559 108 aa4,79□□□□□ -1,64
Rpusd3-204ENSMUST00000129047 Muc16A0A140LJ72 8478 aa4,76□□□□□ -1,65
Rpusd3-204ENSMUST00000129047 Gm10142J3KMP7 120 aa4,71□□□□□ -1,66
Rpusd3-204ENSMUST00000129047 Gm29735A0A1B0GT06 219 aa4,7□□□□□ -1,66
Rpusd3-204ENSMUST00000129047 Gm20538F6Z9R1 75 aa4,55□□□□□ -1,68
Rpusd3-204ENSMUST00000129047 1110025L11RikO09048 78 aa4,51□□□□□ -1,69
Rpusd3-204ENSMUST00000129047 Krtap6-5Q925H3 78 aa4,51□□□□□ -1,69
Rpusd3-204ENSMUST00000129047 Gm11567Q9D141 195 aa4,46□□□□□ -1,7
Rpusd3-204ENSMUST00000129047 Ndufaf8A2AMZ4 74 aa4,26□□□□□ -1,73
Rpusd3-204ENSMUST00000129047 Gm10229O08631 77 aa4,07□□□□□ -1,76
Rpusd3-204ENSMUST00000129047 A030003K21RikA0A1Y7VIM3 128 aa3,96□□□□□ -1,78
Rpusd3-204ENSMUST00000129047 Sprr2bO70554 98 aa3,74□□□□□ -1,81
Rpusd3-204ENSMUST00000129047 Krtap5-1Q64507 230 aa3,74□□□□□ -1,81
Rpusd3-204ENSMUST00000129047 Krtap31-2Q8CAY5 177 aa3,74□□□□□ -1,81
Rpusd3-204ENSMUST00000129047 Krtap31-1Q9D644 177 aa3,71□□□□□ -1,82
Rpusd3-204ENSMUST00000129047 Krtap6-2O08884 159 aa3,66□□□□□ -1,82
Rpusd3-204ENSMUST00000129047 Krtap21-1Q925H4 128 aa3,64□□□□□ -1,83
Rpusd3-204ENSMUST00000129047 Krtap28-10A0A1Y7VP58 119 aa3,58□□□□□ -1,84
Rpusd3-204ENSMUST00000129047 Gm9112A2AI92 75 aa3,58□□□□□ -1,84
Rpusd3-204ENSMUST00000129047 Krtap28-13A0A087WQP5 138 aa3,38□□□□□ -1,87
Rpusd3-204ENSMUST00000129047 A030005K14RikA0A1Y7VNY1 122 aa3,35□□□□□ -1,87
Rpusd3-204ENSMUST00000129047 A0A286YCP9 139 aa3,28□□□□□ -1,88
Rpusd3-204ENSMUST00000129047 A030014E15RikA0A1Y7VJV2 120 aa3,18□□□□□ -1,9
Rpusd3-204ENSMUST00000129047 Gm6217A0A1Y7VJK9 128 aa2,97□□□□□ -1,93
Rpusd3-204ENSMUST00000129047 Gm7544A0A1Y7VJ58 118 aa2,96□□□□□ -1,94
Rpusd3-204ENSMUST00000129047 Phgr1Q8K0G7 91 aa2,93□□□□□ -1,94
Rpusd3-204ENSMUST00000129047 Gm4559A4IF42 199 aa2,75□□□□□ -1,97
Retrieved 80 of 22,080 RNA–protein pairs in 53 ms