RNA–Protein interactions for RNA: ENSMUST00000113457.8

Col4a3-201, Transcript of Collagen alpha-3(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a3, Length 8,554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3-201ENSMUST00000113457 Herc2Q4U2R1 4836 aa3.14□□□□□ -1.91
Col4a3-201ENSMUST00000113457 2300003K06RikA2A4M0 262 aa3.13□□□□□ -1.91
Col4a3-201ENSMUST00000113457 Kmt2cQ8BRH4 4903 aa3.09□□□□□ -1.91
Col4a3-201ENSMUST00000113457 Lce1kJ3QP15 125 aa3.09□□□□□ -1.92
Col4a3-201ENSMUST00000113457 Gm11596B1AQB0 205 aa3.08□□□□□ -1.92
Col4a3-201ENSMUST00000113457 Krtap4-1Q3UUY3 169 aa3.06□□□□□ -1.92
Col4a3-201ENSMUST00000113457 Kiaa1109A2AAE1 5005 aa3.03□□□□□ -1.92
Col4a3-201ENSMUST00000113457 Gm6217A0A1Y7VJK9 128 aa3.02□□□□□ -1.93
Col4a3-201ENSMUST00000113457 Gm11564A2A4L9 201 aa3.02□□□□□ -1.93
Col4a3-201ENSMUST00000113457 Gm11563B1AQ90 168 aa3.02□□□□□ -1.93
Col4a3-201ENSMUST00000113457 Gm11595B1AQA7 289 aa3.02□□□□□ -1.93
Col4a3-201ENSMUST00000113457 Krtap4-8B1AQA8 209 aa3.02□□□□□ -1.93
Col4a3-201ENSMUST00000113457 Krtap4-9B1AQA9 244 aa3.02□□□□□ -1.93
Col4a3-201ENSMUST00000113457 Krtap4-13Q9D7P3 165 aa2.98□□□□□ -1.93
Col4a3-201ENSMUST00000113457 Herc1E9PZP8 4859 aa2.97□□□□□ -1.93
Col4a3-201ENSMUST00000113457 HydinQ80W93 5154 aa2.96□□□□□ -1.93
Col4a3-201ENSMUST00000113457 Mt1P02802 61 aaKnown RBP2.96□□□□□ -1.94
Col4a3-201ENSMUST00000113457 Muc5bE9Q5I3 4800 aa2.94□□□□□ -1.94
Col4a3-201ENSMUST00000113457 4932415D10RikA0A1W2P6U8 4986 aa2.88□□□□□ -1.95
Col4a3-201ENSMUST00000113457 Krtap4-16Q91W93 202 aa2.88□□□□□ -1.95
Col4a3-201ENSMUST00000113457 Krtap28-10A0A1Y7VP58 119 aa2.82□□□□□ -1.96
Col4a3-201ENSMUST00000113457 Gm11554B1AQB2 190 aa2.8□□□□□ -1.96
Col4a3-201ENSMUST00000113457 A030005K14RikA0A1Y7VNY1 122 aa2.79□□□□□ -1.96
Col4a3-201ENSMUST00000113457 Syne2Q6ZWQ0 6874 aaKnown RBP2.76□□□□□ -1.97
Col4a3-201ENSMUST00000113457 Abca13Q5SSE9 5034 aa2.75□□□□□ -1.97
Col4a3-201ENSMUST00000113457 A030005L19RikA0A1Y7VIU2 113 aa2.74□□□□□ -1.97
Col4a3-201ENSMUST00000113457 Krtap6-3A0A087WQL6 57 aa2.74□□□□□ -1.97
Col4a3-201ENSMUST00000113457 Ubr4A2AN08 5180 aa2.74□□□□□ -1.97
Col4a3-201ENSMUST00000113457 Krtap17-1A2A5X6 109 aa2.72□□□□□ -1.97
Col4a3-201ENSMUST00000113457 Gm7544A0A1Y7VJ58 118 aa2.68□□□□□ -1.98
Col4a3-201ENSMUST00000113457 Syne1Q6ZWR6 8799 aa2.66□□□□□ -1.98
Col4a3-201ENSMUST00000113457 Krtap28-13A0A087WQP5 138 aa2.65□□□□□ -1.99
Col4a3-201ENSMUST00000113457 A0A1Y7VJ07 166 aa2.64□□□□□ -1.99
Col4a3-201ENSMUST00000113457 Fat4Q2PZL6 4981 aa2.63□□□□□ -1.99
Col4a3-201ENSMUST00000113457 Hmcn2A2AJ76 5100 aa2.62□□□□□ -1.99
Col4a3-201ENSMUST00000113457 Fsip2A2ARZ3 6995 aa2.6□□□□□ -1.99
Col4a3-201ENSMUST00000113457 Eppk1Q8R0W0 6548 aa2.59□□□□□ -2
Col4a3-201ENSMUST00000113457 Ush2AQ2QI47 5193 aa2.56□□□□□ -2
Col4a3-201ENSMUST00000113457 SspoQ8CG65 4998 aa2.56□□□□□ -2
Col4a3-201ENSMUST00000113457 Rnf213E9Q555 5152 aaKnown RBP2.53□□□□□ -2
Col4a3-201ENSMUST00000113457 Krtap20-2E9Q0A8 60 aa2.5□□□□□ -2.01
Col4a3-201ENSMUST00000113457 A0A1Y7VJH8 109 aa2.46□□□□□ -2.02
Col4a3-201ENSMUST00000113457 ObscnA2AAJ9 8891 aaKnown RBP2.46□□□□□ -2.02
Col4a3-201ENSMUST00000113457 A030014E15RikA0A1Y7VJV2 120 aa2.4□□□□□ -2.03
Col4a3-201ENSMUST00000113457 Gm11555B1AQ89 175 aa2.35□□□□□ -2.03
Col4a3-201ENSMUST00000113457 1110025L11RikO09048 78 aa2.26□□□□□ -2.05
Col4a3-201ENSMUST00000113457 Krtap6-5Q925H3 78 aa2.26□□□□□ -2.05
Col4a3-201ENSMUST00000113457 Gm11639A0A1D5RLM8 5808 aa2.22□□□□□ -2.05
Col4a3-201ENSMUST00000113457 Gm10229O08631 77 aa2.13□□□□□ -2.07
Col4a3-201ENSMUST00000113457 A0A286YCP9 139 aa2.13□□□□□ -2.07
Col4a3-201ENSMUST00000113457 Krtap5-2Q9D5Z7 189 aa2.12□□□□□ -2.07
Col4a3-201ENSMUST00000113457 Kmt2dQ6PDK2 5588 aa2.1□□□□□ -2.07
Col4a3-201ENSMUST00000113457 Phgr1Q8K0G7 91 aa2.1□□□□□ -2.07
Col4a3-201ENSMUST00000113457 Macf1Q9QXZ0 7354 aaKnown RBP2.06□□□□□ -2.08
Col4a3-201ENSMUST00000113457 DstQ91ZU6 7393 aaKnown RBP2.05□□□□□ -2.08
Col4a3-201ENSMUST00000113457 Gpr98Q8VHN7 6298 aaKnown RBP2.04□□□□□ -2.08
Col4a3-201ENSMUST00000113457 Gm11559Q9D3H7 191 aa2.03□□□□□ -2.08
Col4a3-201ENSMUST00000113457 NebE9Q1W3 7152 aa2.02□□□□□ -2.09
Col4a3-201ENSMUST00000113457 Gm4553A0A1B0GSA9 284 aa1.98□□□□□ -2.09
Col4a3-201ENSMUST00000113457 Krtap9-1Q64526 186 aa1.94□□□□□ -2.1
Col4a3-201ENSMUST00000113457 Muc16A0A140LJ72 8478 aa1.93□□□□□ -2.1
Col4a3-201ENSMUST00000113457 Hmcn1D3YXG0 5634 aa1.91□□□□□ -2.1
Col4a3-201ENSMUST00000113457 Gm11568A2A4M2 211 aa1.9□□□□□ -2.1
Col4a3-201ENSMUST00000113457 Gm45337A0A1B0GS71 263 aa1.82□□□□□ -2.12
Col4a3-201ENSMUST00000113457 Gm10153A0A1B0GRL1 320 aa1.81□□□□□ -2.12
Col4a3-201ENSMUST00000113457 Gm40460A0A1B0GR10 244 aa1.81□□□□□ -2.12
Col4a3-201ENSMUST00000113457 Gm7579A0A1B0GRJ4 243 aa1.81□□□□□ -2.12
Col4a3-201ENSMUST00000113457 Krtap5-5Q2TA51 241 aa1.81□□□□□ -2.12
Col4a3-201ENSMUST00000113457 Krtap5-4Q62220 223 aa1.81□□□□□ -2.12
Col4a3-201ENSMUST00000113457 Gm11567Q9D141 195 aa1.8□□□□□ -2.12
Col4a3-201ENSMUST00000113457 AhnakE9Q616 5656 aaKnown RBP1.8□□□□□ -2.12
Col4a3-201ENSMUST00000113457 Gm39115A0A1B0GSH7 232 aa1.79□□□□□ -2.12
Col4a3-201ENSMUST00000113457 Muc19Q6PZE0 7524 aa1.75□□□□□ -2.13
Col4a3-201ENSMUST00000113457 Krtap6-2O08884 159 aa1.7□□□□□ -2.14
Col4a3-201ENSMUST00000113457 Gm2431E9Q8S1 172 aa1.64□□□□□ -2.15
Col4a3-201ENSMUST00000113457 Krtap21-1Q925H4 128 aa1.61□□□□□ -2.15
Col4a3-201ENSMUST00000113457 Gm45618A0A1B0GSA0 219 aa1.56□□□□□ -2.16
Col4a3-201ENSMUST00000113457 Gm29735A0A1B0GT06 219 aa1.46□□□□□ -2.18
Col4a3-201ENSMUST00000113457 Krtap5-1Q64507 230 aa0.85□□□□□ -2.27
Col4a3-201ENSMUST00000113457 Gm4559A4IF42 199 aa0.64□□□□□ -2.31
Retrieved 80 of 22,080 RNA–protein pairs in 70.6 ms