RNA–Protein interactions for RNA: ENSMUST00000113337.9

Ubr2-202, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ubr2, Length 7,633 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-202ENSMUST00000113337 Gm11938Q9D3H4 131 aa4.47□□□□□ -1.69
Ubr2-202ENSMUST00000113337 Lrp2A2ARV4 4660 aa4.47□□□□□ -1.69
Ubr2-202ENSMUST00000113337 Mt3P28184 68 aa4.46□□□□□ -1.69
Ubr2-202ENSMUST00000113337 Kmt2cQ8BRH4 4903 aa4.33□□□□□ -1.72
Ubr2-202ENSMUST00000113337 Ryr3A2AGL3 4863 aa4.32□□□□□ -1.72
Ubr2-202ENSMUST00000113337 Herc2Q4U2R1 4836 aa4.25□□□□□ -1.73
Ubr2-202ENSMUST00000113337 Gm11554B1AQB2 190 aa4.23□□□□□ -1.73
Ubr2-202ENSMUST00000113337 Syne2Q6ZWQ0 6874 aaKnown RBP4.12□□□□□ -1.75
Ubr2-202ENSMUST00000113337 HydinQ80W93 5154 aa4.1□□□□□ -1.75
Ubr2-202ENSMUST00000113337 Syne1Q6ZWR6 8799 aa4.09□□□□□ -1.75
Ubr2-202ENSMUST00000113337 Ryr2E9Q401 4966 aaKnown RBP4.07□□□□□ -1.76
Ubr2-202ENSMUST00000113337 Krtap17-1A2A5X6 109 aa4.05□□□□□ -1.76
Ubr2-202ENSMUST00000113337 Kiaa1109A2AAE1 5005 aa4.02□□□□□ -1.77
Ubr2-202ENSMUST00000113337 PcloQ9QYX7 5068 aa4□□□□□ -1.77
Ubr2-202ENSMUST00000113337 Fsip2A2ARZ3 6995 aa4□□□□□ -1.77
Ubr2-202ENSMUST00000113337 Krtap6-3A0A087WQL6 57 aa3.97□□□□□ -1.77
Ubr2-202ENSMUST00000113337 Abca13Q5SSE9 5034 aa3.83□□□□□ -1.8
Ubr2-202ENSMUST00000113337 Krtap20-2E9Q0A8 60 aa3.76□□□□□ -1.81
Ubr2-202ENSMUST00000113337 Mt1P02802 61 aaKnown RBP3.75□□□□□ -1.81
Ubr2-202ENSMUST00000113337 Hmcn2A2AJ76 5100 aa3.74□□□□□ -1.81
Ubr2-202ENSMUST00000113337 Mdn1A2ANY6 5589 aaKnown RBP3.74□□□□□ -1.81
Ubr2-202ENSMUST00000113337 Herc1E9PZP8 4859 aa3.72□□□□□ -1.81
Ubr2-202ENSMUST00000113337 Birc6O88738 4882 aa3.71□□□□□ -1.82
Ubr2-202ENSMUST00000113337 ZanO88799 5376 aa3.62□□□□□ -1.83
Ubr2-202ENSMUST00000113337 Muc5bE9Q5I3 4800 aa3.61□□□□□ -1.83
Ubr2-202ENSMUST00000113337 Ubr4A2AN08 5180 aa3.57□□□□□ -1.84
Ubr2-202ENSMUST00000113337 Fat4Q2PZL6 4981 aa3.44□□□□□ -1.86
Ubr2-202ENSMUST00000113337 ObscnA2AAJ9 8891 aaKnown RBP3.43□□□□□ -1.86
Ubr2-202ENSMUST00000113337 Gm11555B1AQ89 175 aa3.42□□□□□ -1.86
Ubr2-202ENSMUST00000113337 4932415D10RikA0A1W2P6U8 4986 aa3.41□□□□□ -1.86
Ubr2-202ENSMUST00000113337 Ush2AQ2QI47 5193 aa3.29□□□□□ -1.88
Ubr2-202ENSMUST00000113337 Rnf213E9Q555 5152 aaKnown RBP3.24□□□□□ -1.89
Ubr2-202ENSMUST00000113337 Muc16A0A140LJ72 8478 aa3.19□□□□□ -1.9
Ubr2-202ENSMUST00000113337 1110025L11RikO09048 78 aa3.17□□□□□ -1.9
Ubr2-202ENSMUST00000113337 Krtap6-5Q925H3 78 aa3.17□□□□□ -1.9
Ubr2-202ENSMUST00000113337 Gm10229O08631 77 aa3.13□□□□□ -1.91
Ubr2-202ENSMUST00000113337 Phgr1Q8K0G7 91 aa3.11□□□□□ -1.91
Ubr2-202ENSMUST00000113337 SspoQ8CG65 4998 aa3.04□□□□□ -1.92
Ubr2-202ENSMUST00000113337 NebE9Q1W3 7152 aa2.92□□□□□ -1.94
Ubr2-202ENSMUST00000113337 Macf1Q9QXZ0 7354 aaKnown RBP2.92□□□□□ -1.94
Ubr2-202ENSMUST00000113337 DstQ91ZU6 7393 aaKnown RBP2.88□□□□□ -1.95
Ubr2-202ENSMUST00000113337 Gm11568A2A4M2 211 aa2.81□□□□□ -1.96
Ubr2-202ENSMUST00000113337 Krtap9-1Q64526 186 aa2.81□□□□□ -1.96
Ubr2-202ENSMUST00000113337 Gm11559Q9D3H7 191 aa2.81□□□□□ -1.96
Ubr2-202ENSMUST00000113337 Muc19Q6PZE0 7524 aa2.8□□□□□ -1.96
Ubr2-202ENSMUST00000113337 Eppk1Q8R0W0 6548 aa2.78□□□□□ -1.96
Ubr2-202ENSMUST00000113337 Gm11567Q9D141 195 aa2.58□□□□□ -2
Ubr2-202ENSMUST00000113337 Krtap6-2O08884 159 aa2.43□□□□□ -2.02
Ubr2-202ENSMUST00000113337 Kmt2dQ6PDK2 5588 aa2.42□□□□□ -2.02
Ubr2-202ENSMUST00000113337 Krtap21-1Q925H4 128 aa2.08□□□□□ -2.08
Ubr2-202ENSMUST00000113337 Krtap5-2Q9D5Z7 189 aa1.96□□□□□ -2.09
Ubr2-202ENSMUST00000113337 Hmcn1D3YXG0 5634 aa1.92□□□□□ -2.1
Ubr2-202ENSMUST00000113337 Gm2431E9Q8S1 172 aa1.9□□□□□ -2.11
Ubr2-202ENSMUST00000113337 Gm4553A0A1B0GSA9 284 aa1.86□□□□□ -2.11
Ubr2-202ENSMUST00000113337 Gm11639A0A1D5RLM8 5808 aa1.74□□□□□ -2.13
Ubr2-202ENSMUST00000113337 Gm10153A0A1B0GRL1 320 aa1.73□□□□□ -2.13
Ubr2-202ENSMUST00000113337 Gpr98Q8VHN7 6298 aaKnown RBP1.7□□□□□ -2.14
Ubr2-202ENSMUST00000113337 A030005L19RikA0A1Y7VIU2 113 aa1.65□□□□□ -2.15
Ubr2-202ENSMUST00000113337 AhnakE9Q616 5656 aaKnown RBP1.58□□□□□ -2.16
Ubr2-202ENSMUST00000113337 Gm45337A0A1B0GS71 263 aa1.55□□□□□ -2.16
Ubr2-202ENSMUST00000113337 Gm40460A0A1B0GR10 244 aa1.5□□□□□ -2.17
Ubr2-202ENSMUST00000113337 Gm7579A0A1B0GRJ4 243 aa1.5□□□□□ -2.17
Ubr2-202ENSMUST00000113337 Krtap5-5Q2TA51 241 aa1.5□□□□□ -2.17
Ubr2-202ENSMUST00000113337 Krtap5-4Q62220 223 aa1.5□□□□□ -2.17
Ubr2-202ENSMUST00000113337 A0A1Y7VJH8 109 aa1.5□□□□□ -2.17
Ubr2-202ENSMUST00000113337 Gm39115A0A1B0GSH7 232 aa1.37□□□□□ -2.19
Ubr2-202ENSMUST00000113337 A0A1Y7VJ07 166 aa1.33□□□□□ -2.2
Ubr2-202ENSMUST00000113337 A0A1Y7VLE6 161 aa1.32□□□□□ -2.2
Ubr2-202ENSMUST00000113337 Krtap5-1Q64507 230 aa1.24□□□□□ -2.21
Ubr2-202ENSMUST00000113337 A0A286YCP9 139 aa1.21□□□□□ -2.22
Ubr2-202ENSMUST00000113337 Gm29735A0A1B0GT06 219 aa1.13□□□□□ -2.23
Ubr2-202ENSMUST00000113337 Krtap28-13A0A087WQP5 138 aa1.11□□□□□ -2.23
Ubr2-202ENSMUST00000113337 Krtap28-10A0A1Y7VP58 119 aa1.07□□□□□ -2.24
Ubr2-202ENSMUST00000113337 Gm45618A0A1B0GSA0 219 aa1.06□□□□□ -2.24
Ubr2-202ENSMUST00000113337 A030014E15RikA0A1Y7VJV2 120 aa0.97□□□□□ -2.25
Ubr2-202ENSMUST00000113337 A030005K14RikA0A1Y7VNY1 122 aa0.91□□□□□ -2.26
Ubr2-202ENSMUST00000113337 Gm7544A0A1Y7VJ58 118 aa0.84□□□□□ -2.28
Ubr2-202ENSMUST00000113337 A030003K21RikA0A1Y7VIM3 128 aa0.8□□□□□ -2.28
Ubr2-202ENSMUST00000113337 Gm6217A0A1Y7VJK9 128 aa0.76□□□□□ -2.29
Ubr2-202ENSMUST00000113337 Gm4559A4IF42 199 aa0.61□□□□□ -2.31
Retrieved 80 of 22,080 RNA–protein pairs in 7.2 ms