RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

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Gene Shroom3, Length 6,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 Krtap17-1A2A5X6 109 aa5,14□□□□□ -1,59
Shroom3-201ENSMUST00000113051 Sprr2hO70559 108 aa5,12□□□□□ -1,59
Shroom3-201ENSMUST00000113051 Birc6O88738 4882 aa5,12□□□□□ -1,59
Shroom3-201ENSMUST00000113051 Mdn1A2ANY6 5589 aaKnown RBP5,08□□□□□ -1,6
Shroom3-201ENSMUST00000113051 Lce1kJ3QP15 125 aa5,03□□□□□ -1,6
Shroom3-201ENSMUST00000113051 Gm11562A0PK51 136 aa4,98□□□□□ -1,61
Shroom3-201ENSMUST00000113051 Sprr2dO70555 85 aa4,96□□□□□ -1,62
Shroom3-201ENSMUST00000113051 Krtap31-1Q9D644 177 aa4,92□□□□□ -1,62
Shroom3-201ENSMUST00000113051 Fsip2A2ARZ3 6995 aa4,88□□□□□ -1,63
Shroom3-201ENSMUST00000113051 4932415D10RikA0A1W2P6U8 4986 aa4,87□□□□□ -1,63
Shroom3-201ENSMUST00000113051 Lce1a1Q9CQH5 143 aa4,83□□□□□ -1,64
Shroom3-201ENSMUST00000113051 Gm11938Q9D3H4 131 aa4,83□□□□□ -1,64
Shroom3-201ENSMUST00000113051 Ubr4A2AN08 5180 aa4,82□□□□□ -1,64
Shroom3-201ENSMUST00000113051 Syne2Q6ZWQ0 6874 aaKnown RBP4,8□□□□□ -1,64
Shroom3-201ENSMUST00000113051 Syne1Q6ZWR6 8799 aa4,78□□□□□ -1,64
Shroom3-201ENSMUST00000113051 Mt3P28184 68 aa4,74□□□□□ -1,65
Shroom3-201ENSMUST00000113051 Fat4Q2PZL6 4981 aa4,74□□□□□ -1,65
Shroom3-201ENSMUST00000113051 Abca13Q5SSE9 5034 aa4,73□□□□□ -1,65
Shroom3-201ENSMUST00000113051 Gm11554B1AQB2 190 aa4,72□□□□□ -1,65
Shroom3-201ENSMUST00000113051 Krtap4-16Q91W93 202 aa4,7□□□□□ -1,66
Shroom3-201ENSMUST00000113051 Sprr2bO70554 98 aa4,69□□□□□ -1,66
Shroom3-201ENSMUST00000113051 ZanO88799 5376 aa4,68□□□□□ -1,66
Shroom3-201ENSMUST00000113051 Muc5bE9Q5I3 4800 aa4,66□□□□□ -1,66
Shroom3-201ENSMUST00000113051 Hmcn2A2AJ76 5100 aa4,65□□□□□ -1,66
Shroom3-201ENSMUST00000113051 Krtap6-3A0A087WQL6 57 aa4,52□□□□□ -1,69
Shroom3-201ENSMUST00000113051 Rnf213E9Q555 5152 aaKnown RBP4,44□□□□□ -1,7
Shroom3-201ENSMUST00000113051 Krtap31-2Q8CAY5 177 aa4,41□□□□□ -1,7
Shroom3-201ENSMUST00000113051 Ush2AQ2QI47 5193 aa4,36□□□□□ -1,71
Shroom3-201ENSMUST00000113051 Krtap20-2E9Q0A8 60 aa4,34□□□□□ -1,72
Shroom3-201ENSMUST00000113051 Mt1P02802 61 aaKnown RBP4,22□□□□□ -1,73
Shroom3-201ENSMUST00000113051 SspoQ8CG65 4998 aa4,18□□□□□ -1,74
Shroom3-201ENSMUST00000113051 Muc16A0A140LJ72 8478 aa3,97□□□□□ -1,77
Shroom3-201ENSMUST00000113051 ObscnA2AAJ9 8891 aaKnown RBP3,86□□□□□ -1,79
Shroom3-201ENSMUST00000113051 Macf1Q9QXZ0 7354 aaKnown RBP3,7□□□□□ -1,82
Shroom3-201ENSMUST00000113051 Eppk1Q8R0W0 6548 aa3,68□□□□□ -1,82
Shroom3-201ENSMUST00000113051 NebE9Q1W3 7152 aa3,66□□□□□ -1,82
Shroom3-201ENSMUST00000113051 DstQ91ZU6 7393 aaKnown RBP3,63□□□□□ -1,83
Shroom3-201ENSMUST00000113051 Gm11555B1AQ89 175 aa3,59□□□□□ -1,83
Shroom3-201ENSMUST00000113051 Kmt2dQ6PDK2 5588 aa3,59□□□□□ -1,84
Shroom3-201ENSMUST00000113051 1110025L11RikO09048 78 aa3,45□□□□□ -1,86
Shroom3-201ENSMUST00000113051 Krtap6-5Q925H3 78 aa3,45□□□□□ -1,86
Shroom3-201ENSMUST00000113051 Gm10229O08631 77 aa3,35□□□□□ -1,87
Shroom3-201ENSMUST00000113051 Muc19Q6PZE0 7524 aa3,35□□□□□ -1,87
Shroom3-201ENSMUST00000113051 Gm11559Q9D3H7 191 aa3,31□□□□□ -1,88
Shroom3-201ENSMUST00000113051 Gm11568A2A4M2 211 aa3,23□□□□□ -1,89
Shroom3-201ENSMUST00000113051 Krtap9-1Q64526 186 aa3,23□□□□□ -1,89
Shroom3-201ENSMUST00000113051 Phgr1Q8K0G7 91 aa3,22□□□□□ -1,89
Shroom3-201ENSMUST00000113051 Gm11639A0A1D5RLM8 5808 aa2,97□□□□□ -1,93
Shroom3-201ENSMUST00000113051 Gpr98Q8VHN7 6298 aaKnown RBP2,85□□□□□ -1,95
Shroom3-201ENSMUST00000113051 Krtap5-2Q9D5Z7 189 aa2,68□□□□□ -1,98
Shroom3-201ENSMUST00000113051 Hmcn1D3YXG0 5634 aa2,67□□□□□ -1,98
Shroom3-201ENSMUST00000113051 Krtap6-2O08884 159 aa2,65□□□□□ -1,99
Shroom3-201ENSMUST00000113051 Gm11567Q9D141 195 aa2,56□□□□□ -2
Shroom3-201ENSMUST00000113051 Gm4553A0A1B0GSA9 284 aa2,53□□□□□ -2,01
Shroom3-201ENSMUST00000113051 Gm2431E9Q8S1 172 aa2,41□□□□□ -2,02
Shroom3-201ENSMUST00000113051 AhnakE9Q616 5656 aaKnown RBP2,38□□□□□ -2,03
Shroom3-201ENSMUST00000113051 Krtap21-1Q925H4 128 aa2,35□□□□□ -2,03
Shroom3-201ENSMUST00000113051 A030005L19RikA0A1Y7VIU2 113 aa2,25□□□□□ -2,05
Shroom3-201ENSMUST00000113051 Gm10153A0A1B0GRL1 320 aa2,24□□□□□ -2,05
Shroom3-201ENSMUST00000113051 A0A1Y7VJH8 109 aa2,18□□□□□ -2,06
Shroom3-201ENSMUST00000113051 Gm45337A0A1B0GS71 263 aa2,1□□□□□ -2,07
Shroom3-201ENSMUST00000113051 Gm40460A0A1B0GR10 244 aa2,07□□□□□ -2,08
Shroom3-201ENSMUST00000113051 Gm7579A0A1B0GRJ4 243 aa2,07□□□□□ -2,08
Shroom3-201ENSMUST00000113051 Krtap5-5Q2TA51 241 aa2,07□□□□□ -2,08
Shroom3-201ENSMUST00000113051 Krtap5-4Q62220 223 aa2,07□□□□□ -2,08
Shroom3-201ENSMUST00000113051 A0A1Y7VLE6 161 aa2,05□□□□□ -2,08
Shroom3-201ENSMUST00000113051 A0A286YCP9 139 aa1,95□□□□□ -2,1
Shroom3-201ENSMUST00000113051 Gm39115A0A1B0GSH7 232 aa1,92□□□□□ -2,1
Shroom3-201ENSMUST00000113051 A0A1Y7VJ07 166 aa1,91□□□□□ -2,1
Shroom3-201ENSMUST00000113051 A030003K21RikA0A1Y7VIM3 128 aa1,85□□□□□ -2,11
Shroom3-201ENSMUST00000113051 A030005K14RikA0A1Y7VNY1 122 aa1,75□□□□□ -2,13
Shroom3-201ENSMUST00000113051 Krtap28-10A0A1Y7VP58 119 aa1,72□□□□□ -2,13
Shroom3-201ENSMUST00000113051 Krtap28-13A0A087WQP5 138 aa1,7□□□□□ -2,14
Shroom3-201ENSMUST00000113051 Gm6217A0A1Y7VJK9 128 aa1,7□□□□□ -2,14
Shroom3-201ENSMUST00000113051 Gm7544A0A1Y7VJ58 118 aa1,65□□□□□ -2,15
Shroom3-201ENSMUST00000113051 Gm45618A0A1B0GSA0 219 aa1,57□□□□□ -2,16
Shroom3-201ENSMUST00000113051 Gm29735A0A1B0GT06 219 aa1,55□□□□□ -2,16
Shroom3-201ENSMUST00000113051 Krtap5-1Q64507 230 aa1,51□□□□□ -2,17
Shroom3-201ENSMUST00000113051 A030014E15RikA0A1Y7VJV2 120 aa1,48□□□□□ -2,17
Shroom3-201ENSMUST00000113051 Gm4559A4IF42 199 aa0,82□□□□□ -2,28
Retrieved 80 of 22,080 RNA–protein pairs in 9 ms