RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 Krtap17-1A2A5X6 109 aa5.14□□□□□ -1.59
Shroom3-201ENSMUST00000113051 Sprr2hO70559 108 aa5.12□□□□□ -1.59
Shroom3-201ENSMUST00000113051 Birc6O88738 4882 aa5.12□□□□□ -1.59
Shroom3-201ENSMUST00000113051 Mdn1A2ANY6 5589 aaKnown RBP5.08□□□□□ -1.6
Shroom3-201ENSMUST00000113051 Lce1kJ3QP15 125 aa5.03□□□□□ -1.6
Shroom3-201ENSMUST00000113051 Gm11562A0PK51 136 aa4.98□□□□□ -1.61
Shroom3-201ENSMUST00000113051 Sprr2dO70555 85 aa4.96□□□□□ -1.62
Shroom3-201ENSMUST00000113051 Krtap31-1Q9D644 177 aa4.92□□□□□ -1.62
Shroom3-201ENSMUST00000113051 Fsip2A2ARZ3 6995 aa4.88□□□□□ -1.63
Shroom3-201ENSMUST00000113051 4932415D10RikA0A1W2P6U8 4986 aa4.87□□□□□ -1.63
Shroom3-201ENSMUST00000113051 Lce1a1Q9CQH5 143 aa4.83□□□□□ -1.64
Shroom3-201ENSMUST00000113051 Gm11938Q9D3H4 131 aa4.83□□□□□ -1.64
Shroom3-201ENSMUST00000113051 Ubr4A2AN08 5180 aa4.82□□□□□ -1.64
Shroom3-201ENSMUST00000113051 Syne2Q6ZWQ0 6874 aaKnown RBP4.8□□□□□ -1.64
Shroom3-201ENSMUST00000113051 Syne1Q6ZWR6 8799 aa4.78□□□□□ -1.64
Shroom3-201ENSMUST00000113051 Mt3P28184 68 aa4.74□□□□□ -1.65
Shroom3-201ENSMUST00000113051 Fat4Q2PZL6 4981 aa4.74□□□□□ -1.65
Shroom3-201ENSMUST00000113051 Abca13Q5SSE9 5034 aa4.73□□□□□ -1.65
Shroom3-201ENSMUST00000113051 Gm11554B1AQB2 190 aa4.72□□□□□ -1.65
Shroom3-201ENSMUST00000113051 Krtap4-16Q91W93 202 aa4.7□□□□□ -1.66
Shroom3-201ENSMUST00000113051 Sprr2bO70554 98 aa4.69□□□□□ -1.66
Shroom3-201ENSMUST00000113051 ZanO88799 5376 aa4.68□□□□□ -1.66
Shroom3-201ENSMUST00000113051 Muc5bE9Q5I3 4800 aa4.66□□□□□ -1.66
Shroom3-201ENSMUST00000113051 Hmcn2A2AJ76 5100 aa4.65□□□□□ -1.66
Shroom3-201ENSMUST00000113051 Krtap6-3A0A087WQL6 57 aa4.52□□□□□ -1.69
Shroom3-201ENSMUST00000113051 Rnf213E9Q555 5152 aaKnown RBP4.44□□□□□ -1.7
Shroom3-201ENSMUST00000113051 Krtap31-2Q8CAY5 177 aa4.41□□□□□ -1.7
Shroom3-201ENSMUST00000113051 Ush2AQ2QI47 5193 aa4.36□□□□□ -1.71
Shroom3-201ENSMUST00000113051 Krtap20-2E9Q0A8 60 aa4.34□□□□□ -1.72
Shroom3-201ENSMUST00000113051 Mt1P02802 61 aaKnown RBP4.22□□□□□ -1.73
Shroom3-201ENSMUST00000113051 SspoQ8CG65 4998 aa4.18□□□□□ -1.74
Shroom3-201ENSMUST00000113051 Muc16A0A140LJ72 8478 aa3.97□□□□□ -1.77
Shroom3-201ENSMUST00000113051 ObscnA2AAJ9 8891 aaKnown RBP3.86□□□□□ -1.79
Shroom3-201ENSMUST00000113051 Macf1Q9QXZ0 7354 aaKnown RBP3.7□□□□□ -1.82
Shroom3-201ENSMUST00000113051 Eppk1Q8R0W0 6548 aa3.68□□□□□ -1.82
Shroom3-201ENSMUST00000113051 NebE9Q1W3 7152 aa3.66□□□□□ -1.82
Shroom3-201ENSMUST00000113051 DstQ91ZU6 7393 aaKnown RBP3.63□□□□□ -1.83
Shroom3-201ENSMUST00000113051 Gm11555B1AQ89 175 aa3.59□□□□□ -1.83
Shroom3-201ENSMUST00000113051 Kmt2dQ6PDK2 5588 aa3.59□□□□□ -1.84
Shroom3-201ENSMUST00000113051 1110025L11RikO09048 78 aa3.45□□□□□ -1.86
Shroom3-201ENSMUST00000113051 Krtap6-5Q925H3 78 aa3.45□□□□□ -1.86
Shroom3-201ENSMUST00000113051 Gm10229O08631 77 aa3.35□□□□□ -1.87
Shroom3-201ENSMUST00000113051 Muc19Q6PZE0 7524 aa3.35□□□□□ -1.87
Shroom3-201ENSMUST00000113051 Gm11559Q9D3H7 191 aa3.31□□□□□ -1.88
Shroom3-201ENSMUST00000113051 Gm11568A2A4M2 211 aa3.23□□□□□ -1.89
Shroom3-201ENSMUST00000113051 Krtap9-1Q64526 186 aa3.23□□□□□ -1.89
Shroom3-201ENSMUST00000113051 Phgr1Q8K0G7 91 aa3.22□□□□□ -1.89
Shroom3-201ENSMUST00000113051 Gm11639A0A1D5RLM8 5808 aa2.97□□□□□ -1.93
Shroom3-201ENSMUST00000113051 Gpr98Q8VHN7 6298 aaKnown RBP2.85□□□□□ -1.95
Shroom3-201ENSMUST00000113051 Krtap5-2Q9D5Z7 189 aa2.68□□□□□ -1.98
Shroom3-201ENSMUST00000113051 Hmcn1D3YXG0 5634 aa2.67□□□□□ -1.98
Shroom3-201ENSMUST00000113051 Krtap6-2O08884 159 aa2.65□□□□□ -1.99
Shroom3-201ENSMUST00000113051 Gm11567Q9D141 195 aa2.56□□□□□ -2
Shroom3-201ENSMUST00000113051 Gm4553A0A1B0GSA9 284 aa2.53□□□□□ -2.01
Shroom3-201ENSMUST00000113051 Gm2431E9Q8S1 172 aa2.41□□□□□ -2.02
Shroom3-201ENSMUST00000113051 AhnakE9Q616 5656 aaKnown RBP2.38□□□□□ -2.03
Shroom3-201ENSMUST00000113051 Krtap21-1Q925H4 128 aa2.35□□□□□ -2.03
Shroom3-201ENSMUST00000113051 A030005L19RikA0A1Y7VIU2 113 aa2.25□□□□□ -2.05
Shroom3-201ENSMUST00000113051 Gm10153A0A1B0GRL1 320 aa2.24□□□□□ -2.05
Shroom3-201ENSMUST00000113051 A0A1Y7VJH8 109 aa2.18□□□□□ -2.06
Shroom3-201ENSMUST00000113051 Gm45337A0A1B0GS71 263 aa2.1□□□□□ -2.07
Shroom3-201ENSMUST00000113051 Gm40460A0A1B0GR10 244 aa2.07□□□□□ -2.08
Shroom3-201ENSMUST00000113051 Gm7579A0A1B0GRJ4 243 aa2.07□□□□□ -2.08
Shroom3-201ENSMUST00000113051 Krtap5-5Q2TA51 241 aa2.07□□□□□ -2.08
Shroom3-201ENSMUST00000113051 Krtap5-4Q62220 223 aa2.07□□□□□ -2.08
Shroom3-201ENSMUST00000113051 A0A1Y7VLE6 161 aa2.05□□□□□ -2.08
Shroom3-201ENSMUST00000113051 A0A286YCP9 139 aa1.95□□□□□ -2.1
Shroom3-201ENSMUST00000113051 Gm39115A0A1B0GSH7 232 aa1.92□□□□□ -2.1
Shroom3-201ENSMUST00000113051 A0A1Y7VJ07 166 aa1.91□□□□□ -2.1
Shroom3-201ENSMUST00000113051 A030003K21RikA0A1Y7VIM3 128 aa1.85□□□□□ -2.11
Shroom3-201ENSMUST00000113051 A030005K14RikA0A1Y7VNY1 122 aa1.75□□□□□ -2.13
Shroom3-201ENSMUST00000113051 Krtap28-10A0A1Y7VP58 119 aa1.72□□□□□ -2.13
Shroom3-201ENSMUST00000113051 Krtap28-13A0A087WQP5 138 aa1.7□□□□□ -2.14
Shroom3-201ENSMUST00000113051 Gm6217A0A1Y7VJK9 128 aa1.7□□□□□ -2.14
Shroom3-201ENSMUST00000113051 Gm7544A0A1Y7VJ58 118 aa1.65□□□□□ -2.15
Shroom3-201ENSMUST00000113051 Gm45618A0A1B0GSA0 219 aa1.57□□□□□ -2.16
Shroom3-201ENSMUST00000113051 Gm29735A0A1B0GT06 219 aa1.55□□□□□ -2.16
Shroom3-201ENSMUST00000113051 Krtap5-1Q64507 230 aa1.51□□□□□ -2.17
Shroom3-201ENSMUST00000113051 A030014E15RikA0A1Y7VJV2 120 aa1.48□□□□□ -2.17
Shroom3-201ENSMUST00000113051 Gm4559A4IF42 199 aa0.82□□□□□ -2.28
Retrieved 80 of 22,080 RNA–protein pairs in 82.3 ms