RNA–Protein interactions for RNA: ENSMUST00000109502.8

Ccdc85a-204, Transcript of Coiled-coil domain-containing protein 85A, mousemouse

TSL 1 (best) BASIC

Gene Ccdc85a, Length 5,220 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85a-204ENSMUST00000109502 Gm11596B1AQB0 205 aa3.99□□□□□ -1.77
Ccdc85a-204ENSMUST00000109502 Pkhd1l1Q80ZA4 4249 aa3.98□□□□□ -1.77
Ccdc85a-204ENSMUST00000109502 Sprr2hO70559 108 aa3.98□□□□□ -1.77
Ccdc85a-204ENSMUST00000109502 Syne1Q6ZWR6 8799 aa3.97□□□□□ -1.77
Ccdc85a-204ENSMUST00000109502 Mt4P47945 62 aa3.97□□□□□ -1.77
Ccdc85a-204ENSMUST00000109502 Kmt2cQ8BRH4 4903 aa3.96□□□□□ -1.78
Ccdc85a-204ENSMUST00000109502 Krtap31-1Q9D644 177 aa3.92□□□□□ -1.78
Ccdc85a-204ENSMUST00000109502 Pkhd1E9PZ36 4059 aa3.88□□□□□ -1.79
Ccdc85a-204ENSMUST00000109502 Krtap4-1Q3UUY3 169 aa3.88□□□□□ -1.79
Ccdc85a-204ENSMUST00000109502 Abca13Q5SSE9 5034 aa3.87□□□□□ -1.79
Ccdc85a-204ENSMUST00000109502 Gm11564A2A4L9 201 aa3.85□□□□□ -1.79
Ccdc85a-204ENSMUST00000109502 Gm11563B1AQ90 168 aa3.85□□□□□ -1.79
Ccdc85a-204ENSMUST00000109502 Gm11595B1AQA7 289 aa3.85□□□□□ -1.79
Ccdc85a-204ENSMUST00000109502 Krtap4-8B1AQA8 209 aa3.85□□□□□ -1.79
Ccdc85a-204ENSMUST00000109502 Sprr2dO70555 85 aa3.84□□□□□ -1.79
Ccdc85a-204ENSMUST00000109502 Mdn1A2ANY6 5589 aaKnown RBP3.84□□□□□ -1.8
Ccdc85a-204ENSMUST00000109502 Lce1a2Q9D1K4 149 aa3.81□□□□□ -1.8
Ccdc85a-204ENSMUST00000109502 Muc5bE9Q5I3 4800 aa3.79□□□□□ -1.8
Ccdc85a-204ENSMUST00000109502 Krtap4-9B1AQA9 244 aa3.77□□□□□ -1.81
Ccdc85a-204ENSMUST00000109502 Syne2Q6ZWQ0 6874 aaKnown RBP3.73□□□□□ -1.81
Ccdc85a-204ENSMUST00000109502 Fat4Q2PZL6 4981 aa3.73□□□□□ -1.81
Ccdc85a-204ENSMUST00000109502 Gm11938Q9D3H4 131 aa3.72□□□□□ -1.81
Ccdc85a-204ENSMUST00000109502 Krtap6-3A0A087WQL6 57 aa3.72□□□□□ -1.81
Ccdc85a-204ENSMUST00000109502 ZanO88799 5376 aa3.71□□□□□ -1.81
Ccdc85a-204ENSMUST00000109502 Ubr4A2AN08 5180 aa3.7□□□□□ -1.82
Ccdc85a-204ENSMUST00000109502 Krtap4-7Q9D732 168 aa3.69□□□□□ -1.82
Ccdc85a-204ENSMUST00000109502 2300003K06RikA2A4M0 262 aa3.68□□□□□ -1.82
Ccdc85a-204ENSMUST00000109502 Eppk1Q8R0W0 6548 aa3.66□□□□□ -1.82
Ccdc85a-204ENSMUST00000109502 Ush2AQ2QI47 5193 aa3.64□□□□□ -1.83
Ccdc85a-204ENSMUST00000109502 Krtap4-13Q9D7P3 165 aa3.64□□□□□ -1.83
Ccdc85a-204ENSMUST00000109502 Krtap31-2Q8CAY5 177 aa3.61□□□□□ -1.83
Ccdc85a-204ENSMUST00000109502 Rnf213E9Q555 5152 aaKnown RBP3.59□□□□□ -1.83
Ccdc85a-204ENSMUST00000109502 Mt3P28184 68 aa3.57□□□□□ -1.84
Ccdc85a-204ENSMUST00000109502 Lce1kJ3QP15 125 aa3.54□□□□□ -1.84
Ccdc85a-204ENSMUST00000109502 Lce1a1Q9CQH5 143 aa3.53□□□□□ -1.84
Ccdc85a-204ENSMUST00000109502 Krtap4-16Q91W93 202 aa3.52□□□□□ -1.85
Ccdc85a-204ENSMUST00000109502 Hmcn2A2AJ76 5100 aa3.49□□□□□ -1.85
Ccdc85a-204ENSMUST00000109502 Fsip2A2ARZ3 6995 aa3.41□□□□□ -1.86
Ccdc85a-204ENSMUST00000109502 A0A286YCP9 139 aa3.39□□□□□ -1.87
Ccdc85a-204ENSMUST00000109502 Muc16A0A140LJ72 8478 aa3.38□□□□□ -1.87
Ccdc85a-204ENSMUST00000109502 Mt1P02802 61 aaKnown RBP3.35□□□□□ -1.87
Ccdc85a-204ENSMUST00000109502 SspoQ8CG65 4998 aa3.35□□□□□ -1.87
Ccdc85a-204ENSMUST00000109502 Gm11555B1AQ89 175 aa3.27□□□□□ -1.89
Ccdc85a-204ENSMUST00000109502 Sprr2bO70554 98 aa3.26□□□□□ -1.89
Ccdc85a-204ENSMUST00000109502 ObscnA2AAJ9 8891 aaKnown RBP3.25□□□□□ -1.89
Ccdc85a-204ENSMUST00000109502 Krtap20-2E9Q0A8 60 aa3.24□□□□□ -1.89
Ccdc85a-204ENSMUST00000109502 Gm11554B1AQB2 190 aa3.24□□□□□ -1.89
Ccdc85a-204ENSMUST00000109502 Gpr98Q8VHN7 6298 aaKnown RBP2.98□□□□□ -1.93
Ccdc85a-204ENSMUST00000109502 Macf1Q9QXZ0 7354 aaKnown RBP2.9□□□□□ -1.95
Ccdc85a-204ENSMUST00000109502 Kmt2dQ6PDK2 5588 aa2.86□□□□□ -1.95
Ccdc85a-204ENSMUST00000109502 DstQ91ZU6 7393 aaKnown RBP2.84□□□□□ -1.95
Ccdc85a-204ENSMUST00000109502 NebE9Q1W3 7152 aa2.79□□□□□ -1.96
Ccdc85a-204ENSMUST00000109502 Gm11559Q9D3H7 191 aa2.73□□□□□ -1.97
Ccdc85a-204ENSMUST00000109502 1110025L11RikO09048 78 aa2.7□□□□□ -1.98
Ccdc85a-204ENSMUST00000109502 Krtap6-5Q925H3 78 aa2.7□□□□□ -1.98
Ccdc85a-204ENSMUST00000109502 Gm11639A0A1D5RLM8 5808 aa2.7□□□□□ -1.98
Ccdc85a-204ENSMUST00000109502 Gm10229O08631 77 aa2.57□□□□□ -2
Ccdc85a-204ENSMUST00000109502 Muc19Q6PZE0 7524 aa2.54□□□□□ -2
Ccdc85a-204ENSMUST00000109502 Phgr1Q8K0G7 91 aa2.49□□□□□ -2.01
Ccdc85a-204ENSMUST00000109502 Gm11568A2A4M2 211 aa2.46□□□□□ -2.02
Ccdc85a-204ENSMUST00000109502 Krtap9-1Q64526 186 aa2.46□□□□□ -2.02
Ccdc85a-204ENSMUST00000109502 Krtap5-2Q9D5Z7 189 aa2.41□□□□□ -2.02
Ccdc85a-204ENSMUST00000109502 Hmcn1D3YXG0 5634 aa2.41□□□□□ -2.02
Ccdc85a-204ENSMUST00000109502 Gm4553A0A1B0GSA9 284 aa2.36□□□□□ -2.03
Ccdc85a-204ENSMUST00000109502 Gm45618A0A1B0GSA0 219 aa2.17□□□□□ -2.06
Ccdc85a-204ENSMUST00000109502 AhnakE9Q616 5656 aaKnown RBP2.16□□□□□ -2.06
Ccdc85a-204ENSMUST00000109502 Gm2431E9Q8S1 172 aa2.14□□□□□ -2.07
Ccdc85a-204ENSMUST00000109502 Krtap6-2O08884 159 aa2.05□□□□□ -2.08
Ccdc85a-204ENSMUST00000109502 Gm11567Q9D141 195 aa2.04□□□□□ -2.08
Ccdc85a-204ENSMUST00000109502 Gm39115A0A1B0GSH7 232 aa2.04□□□□□ -2.08
Ccdc85a-204ENSMUST00000109502 Gm45337A0A1B0GS71 263 aa2.04□□□□□ -2.08
Ccdc85a-204ENSMUST00000109502 Gm40460A0A1B0GR10 244 aa2.01□□□□□ -2.09
Ccdc85a-204ENSMUST00000109502 Gm7579A0A1B0GRJ4 243 aa2.01□□□□□ -2.09
Ccdc85a-204ENSMUST00000109502 Krtap5-5Q2TA51 241 aa2.01□□□□□ -2.09
Ccdc85a-204ENSMUST00000109502 Krtap5-4Q62220 223 aa2.01□□□□□ -2.09
Ccdc85a-204ENSMUST00000109502 Gm10153A0A1B0GRL1 320 aa1.97□□□□□ -2.09
Ccdc85a-204ENSMUST00000109502 Gm29735A0A1B0GT06 219 aa1.92□□□□□ -2.1
Ccdc85a-204ENSMUST00000109502 Krtap21-1Q925H4 128 aa1.89□□□□□ -2.11
Ccdc85a-204ENSMUST00000109502 Krtap5-1Q64507 230 aa1.57□□□□□ -2.16
Ccdc85a-204ENSMUST00000109502 Gm4559A4IF42 199 aa1.24□□□□□ -2.21
Retrieved 80 of 22,080 RNA–protein pairs in 7.4 ms