RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Krtap4-7Q9D732 168 aa3.33□□□□□ -1.88
Scn8a-203ENSMUST00000108908 Birc6O88738 4882 aa3.31□□□□□ -1.88
Scn8a-203ENSMUST00000108908 Hmcn2A2AJ76 5100 aa3.3□□□□□ -1.88
Scn8a-203ENSMUST00000108908 Gm11562A0PK51 136 aa3.3□□□□□ -1.88
Scn8a-203ENSMUST00000108908 Krtap4-13Q9D7P3 165 aa3.28□□□□□ -1.88
Scn8a-203ENSMUST00000108908 ZanO88799 5376 aa3.27□□□□□ -1.89
Scn8a-203ENSMUST00000108908 Lce1kJ3QP15 125 aa3.24□□□□□ -1.89
Scn8a-203ENSMUST00000108908 Krtap31-1Q9D644 177 aa3.23□□□□□ -1.89
Scn8a-203ENSMUST00000108908 Gm11938Q9D3H4 131 aa3.22□□□□□ -1.89
Scn8a-203ENSMUST00000108908 Sprr2dO70555 85 aa3.21□□□□□ -1.9
Scn8a-203ENSMUST00000108908 Sprr2hO70559 108 aa3.17□□□□□ -1.9
Scn8a-203ENSMUST00000108908 Mt3P28184 68 aa3.09□□□□□ -1.91
Scn8a-203ENSMUST00000108908 Fat4Q2PZL6 4981 aa3.09□□□□□ -1.92
Scn8a-203ENSMUST00000108908 Ubr4A2AN08 5180 aa3.08□□□□□ -1.92
Scn8a-203ENSMUST00000108908 A0A1Y7VLE6 161 aa3.07□□□□□ -1.92
Scn8a-203ENSMUST00000108908 4932415D10RikA0A1W2P6U8 4986 aa3.06□□□□□ -1.92
Scn8a-203ENSMUST00000108908 Lce1a1Q9CQH5 143 aa3.05□□□□□ -1.92
Scn8a-203ENSMUST00000108908 Krtap4-16Q91W93 202 aa3.04□□□□□ -1.92
Scn8a-203ENSMUST00000108908 Muc5bE9Q5I3 4800 aa3□□□□□ -1.93
Scn8a-203ENSMUST00000108908 Fsip2A2ARZ3 6995 aa2.99□□□□□ -1.93
Scn8a-203ENSMUST00000108908 Mdn1A2ANY6 5589 aaKnown RBP2.99□□□□□ -1.93
Scn8a-203ENSMUST00000108908 Syne2Q6ZWQ0 6874 aaKnown RBP2.96□□□□□ -1.93
Scn8a-203ENSMUST00000108908 Krtap6-3A0A087WQL6 57 aa2.93□□□□□ -1.94
Scn8a-203ENSMUST00000108908 Gm11554B1AQB2 190 aa2.93□□□□□ -1.94
Scn8a-203ENSMUST00000108908 Ush2AQ2QI47 5193 aa2.91□□□□□ -1.94
Scn8a-203ENSMUST00000108908 Rnf213E9Q555 5152 aaKnown RBP2.88□□□□□ -1.95
Scn8a-203ENSMUST00000108908 Mt1P02802 61 aaKnown RBP2.86□□□□□ -1.95
Scn8a-203ENSMUST00000108908 Syne1Q6ZWR6 8799 aa2.85□□□□□ -1.95
Scn8a-203ENSMUST00000108908 Sprr2bO70554 98 aa2.84□□□□□ -1.96
Scn8a-203ENSMUST00000108908 A030003K21RikA0A1Y7VIM3 128 aa2.83□□□□□ -1.96
Scn8a-203ENSMUST00000108908 Krtap20-2E9Q0A8 60 aa2.83□□□□□ -1.96
Scn8a-203ENSMUST00000108908 SspoQ8CG65 4998 aa2.78□□□□□ -1.96
Scn8a-203ENSMUST00000108908 A0A1Y7VJH8 109 aa2.7□□□□□ -1.98
Scn8a-203ENSMUST00000108908 Gm6217A0A1Y7VJK9 128 aa2.66□□□□□ -1.98
Scn8a-203ENSMUST00000108908 Krtap31-2Q8CAY5 177 aa2.62□□□□□ -1.99
Scn8a-203ENSMUST00000108908 Krtap28-10A0A1Y7VP58 119 aa2.55□□□□□ -2
Scn8a-203ENSMUST00000108908 Gm11555B1AQ89 175 aa2.55□□□□□ -2
Scn8a-203ENSMUST00000108908 A030005K14RikA0A1Y7VNY1 122 aa2.5□□□□□ -2.01
Scn8a-203ENSMUST00000108908 Krtap28-13A0A087WQP5 138 aa2.45□□□□□ -2.02
Scn8a-203ENSMUST00000108908 Gm7544A0A1Y7VJ58 118 aa2.44□□□□□ -2.02
Scn8a-203ENSMUST00000108908 A0A1Y7VJ07 166 aa2.38□□□□□ -2.03
Scn8a-203ENSMUST00000108908 Muc16A0A140LJ72 8478 aa2.37□□□□□ -2.03
Scn8a-203ENSMUST00000108908 A030005L19RikA0A1Y7VIU2 113 aa2.36□□□□□ -2.03
Scn8a-203ENSMUST00000108908 ObscnA2AAJ9 8891 aaKnown RBP2.36□□□□□ -2.03
Scn8a-203ENSMUST00000108908 1110025L11RikO09048 78 aa2.32□□□□□ -2.04
Scn8a-203ENSMUST00000108908 Krtap6-5Q925H3 78 aa2.32□□□□□ -2.04
Scn8a-203ENSMUST00000108908 Gm11568A2A4M2 211 aa2.28□□□□□ -2.04
Scn8a-203ENSMUST00000108908 Krtap9-1Q64526 186 aa2.28□□□□□ -2.04
Scn8a-203ENSMUST00000108908 Macf1Q9QXZ0 7354 aaKnown RBP2.26□□□□□ -2.05
Scn8a-203ENSMUST00000108908 Gm11559Q9D3H7 191 aa2.26□□□□□ -2.05
Scn8a-203ENSMUST00000108908 Gm10229O08631 77 aa2.22□□□□□ -2.05
Scn8a-203ENSMUST00000108908 DstQ91ZU6 7393 aaKnown RBP2.18□□□□□ -2.06
Scn8a-203ENSMUST00000108908 Eppk1Q8R0W0 6548 aa2.11□□□□□ -2.07
Scn8a-203ENSMUST00000108908 Phgr1Q8K0G7 91 aa2.09□□□□□ -2.07
Scn8a-203ENSMUST00000108908 Kmt2dQ6PDK2 5588 aa2.07□□□□□ -2.08
Scn8a-203ENSMUST00000108908 A030014E15RikA0A1Y7VJV2 120 aa2.06□□□□□ -2.08
Scn8a-203ENSMUST00000108908 NebE9Q1W3 7152 aa2.02□□□□□ -2.09
Scn8a-203ENSMUST00000108908 Muc19Q6PZE0 7524 aa2.02□□□□□ -2.09
Scn8a-203ENSMUST00000108908 Krtap5-2Q9D5Z7 189 aa1.96□□□□□ -2.1
Scn8a-203ENSMUST00000108908 Gpr98Q8VHN7 6298 aaKnown RBP1.84□□□□□ -2.11
Scn8a-203ENSMUST00000108908 Gm11639A0A1D5RLM8 5808 aa1.83□□□□□ -2.12
Scn8a-203ENSMUST00000108908 Gm4553A0A1B0GSA9 284 aa1.82□□□□□ -2.12
Scn8a-203ENSMUST00000108908 Krtap6-2O08884 159 aa1.77□□□□□ -2.13
Scn8a-203ENSMUST00000108908 A0A286YCP9 139 aa1.76□□□□□ -2.13
Scn8a-203ENSMUST00000108908 Gm2431E9Q8S1 172 aa1.76□□□□□ -2.13
Scn8a-203ENSMUST00000108908 Hmcn1D3YXG0 5634 aa1.7□□□□□ -2.14
Scn8a-203ENSMUST00000108908 Gm10153A0A1B0GRL1 320 aa1.68□□□□□ -2.14
Scn8a-203ENSMUST00000108908 Krtap21-1Q925H4 128 aa1.66□□□□□ -2.14
Scn8a-203ENSMUST00000108908 Gm11567Q9D141 195 aa1.65□□□□□ -2.15
Scn8a-203ENSMUST00000108908 Gm45337A0A1B0GS71 263 aa1.59□□□□□ -2.16
Scn8a-203ENSMUST00000108908 Gm40460A0A1B0GR10 244 aa1.53□□□□□ -2.16
Scn8a-203ENSMUST00000108908 Gm7579A0A1B0GRJ4 243 aa1.53□□□□□ -2.16
Scn8a-203ENSMUST00000108908 Krtap5-5Q2TA51 241 aa1.53□□□□□ -2.16
Scn8a-203ENSMUST00000108908 Krtap5-4Q62220 223 aa1.53□□□□□ -2.16
Scn8a-203ENSMUST00000108908 Gm39115A0A1B0GSH7 232 aa1.5□□□□□ -2.17
Scn8a-203ENSMUST00000108908 AhnakE9Q616 5656 aaKnown RBP1.46□□□□□ -2.18
Scn8a-203ENSMUST00000108908 Gm45618A0A1B0GSA0 219 aa1.36□□□□□ -2.19
Scn8a-203ENSMUST00000108908 Gm29735A0A1B0GT06 219 aa1.14□□□□□ -2.23
Scn8a-203ENSMUST00000108908 Krtap5-1Q64507 230 aa1.01□□□□□ -2.25
Scn8a-203ENSMUST00000108908 Gm4559A4IF42 199 aa0.71□□□□□ -2.3
Retrieved 80 of 22,080 RNA–protein pairs in 113.5 ms