RNA–Protein interactions for RNA: ENSMUST00000100069.8

Scn3a-202, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 8,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-202ENSMUST00000100069 Ryr3A2AGL3 4863 aa2.1□□□□□ -2.07
Scn3a-202ENSMUST00000100069 Ush2AQ2QI47 5193 aa2.1□□□□□ -2.07
Scn3a-202ENSMUST00000100069 Sprr2dO70555 85 aa2.08□□□□□ -2.08
Scn3a-202ENSMUST00000100069 Kmt2cQ8BRH4 4903 aa2.04□□□□□ -2.08
Scn3a-202ENSMUST00000100069 Birc6O88738 4882 aa2.04□□□□□ -2.08
Scn3a-202ENSMUST00000100069 Mt4P47945 62 aa2.03□□□□□ -2.08
Scn3a-202ENSMUST00000100069 Gm11938Q9D3H4 131 aa2.02□□□□□ -2.09
Scn3a-202ENSMUST00000100069 Herc2Q4U2R1 4836 aa2.02□□□□□ -2.09
Scn3a-202ENSMUST00000100069 Gm11562A0PK51 136 aa2.02□□□□□ -2.09
Scn3a-202ENSMUST00000100069 Kiaa1109A2AAE1 5005 aa2.01□□□□□ -2.09
Scn3a-202ENSMUST00000100069 Krtap4-2B1AQ85 167 aa1.99□□□□□ -2.09
Scn3a-202ENSMUST00000100069 Lrp2A2ARV4 4660 aa1.98□□□□□ -2.09
Scn3a-202ENSMUST00000100069 Herc1E9PZP8 4859 aa1.96□□□□□ -2.1
Scn3a-202ENSMUST00000100069 Lce1a2Q9D1K4 149 aa1.96□□□□□ -2.1
Scn3a-202ENSMUST00000100069 Krtap4-6Q3V4B7 195 aa1.94□□□□□ -2.1
Scn3a-202ENSMUST00000100069 Fat4Q2PZL6 4981 aa1.94□□□□□ -2.1
Scn3a-202ENSMUST00000100069 Rnf213E9Q555 5152 aaKnown RBP1.94□□□□□ -2.1
Scn3a-202ENSMUST00000100069 Hmcn2A2AJ76 5100 aa1.93□□□□□ -2.1
Scn3a-202ENSMUST00000100069 Gm11563B1AQ90 168 aa1.91□□□□□ -2.1
Scn3a-202ENSMUST00000100069 Krtap4-7Q9D732 168 aa1.91□□□□□ -2.1
Scn3a-202ENSMUST00000100069 4932415D10RikA0A1W2P6U8 4986 aa1.9□□□□□ -2.11
Scn3a-202ENSMUST00000100069 Sprr2bO70554 98 aa1.9□□□□□ -2.11
Scn3a-202ENSMUST00000100069 SspoQ8CG65 4998 aa1.89□□□□□ -2.11
Scn3a-202ENSMUST00000100069 Mdn1A2ANY6 5589 aaKnown RBP1.88□□□□□ -2.11
Scn3a-202ENSMUST00000100069 2300003K06RikA2A4M0 262 aa1.86□□□□□ -2.11
Scn3a-202ENSMUST00000100069 Gm11596B1AQB0 205 aa1.86□□□□□ -2.11
Scn3a-202ENSMUST00000100069 ZanO88799 5376 aa1.86□□□□□ -2.11
Scn3a-202ENSMUST00000100069 Mt1P02802 61 aaKnown RBP1.86□□□□□ -2.11
Scn3a-202ENSMUST00000100069 Gm11564A2A4L9 201 aa1.84□□□□□ -2.12
Scn3a-202ENSMUST00000100069 Gm11595B1AQA7 289 aa1.84□□□□□ -2.12
Scn3a-202ENSMUST00000100069 Krtap4-8B1AQA8 209 aa1.84□□□□□ -2.12
Scn3a-202ENSMUST00000100069 Krtap4-16Q91W93 202 aa1.83□□□□□ -2.12
Scn3a-202ENSMUST00000100069 Lce1kJ3QP15 125 aa1.82□□□□□ -2.12
Scn3a-202ENSMUST00000100069 Kmt2dQ6PDK2 5588 aa1.82□□□□□ -2.12
Scn3a-202ENSMUST00000100069 Krtap4-9B1AQA9 244 aa1.81□□□□□ -2.12
Scn3a-202ENSMUST00000100069 Gm11555B1AQ89 175 aa1.8□□□□□ -2.12
Scn3a-202ENSMUST00000100069 Muc5bE9Q5I3 4800 aa1.79□□□□□ -2.12
Scn3a-202ENSMUST00000100069 Lce1a1Q9CQH5 143 aa1.77□□□□□ -2.13
Scn3a-202ENSMUST00000100069 Krtap4-13Q9D7P3 165 aa1.76□□□□□ -2.13
Scn3a-202ENSMUST00000100069 Krtap6-3A0A087WQL6 57 aa1.75□□□□□ -2.13
Scn3a-202ENSMUST00000100069 Syne1Q6ZWR6 8799 aa1.74□□□□□ -2.13
Scn3a-202ENSMUST00000100069 Syne2Q6ZWQ0 6874 aaKnown RBP1.64□□□□□ -2.15
Scn3a-202ENSMUST00000100069 Eppk1Q8R0W0 6548 aa1.63□□□□□ -2.15
Scn3a-202ENSMUST00000100069 Gm11554B1AQB2 190 aa1.59□□□□□ -2.15
Scn3a-202ENSMUST00000100069 Fsip2A2ARZ3 6995 aa1.54□□□□□ -2.16
Scn3a-202ENSMUST00000100069 Krtap20-2E9Q0A8 60 aa1.52□□□□□ -2.17
Scn3a-202ENSMUST00000100069 Gpr98Q8VHN7 6298 aaKnown RBP1.52□□□□□ -2.17
Scn3a-202ENSMUST00000100069 Gm45618A0A1B0GSA0 219 aa1.5□□□□□ -2.17
Scn3a-202ENSMUST00000100069 1110025L11RikO09048 78 aa1.47□□□□□ -2.17
Scn3a-202ENSMUST00000100069 Krtap6-5Q925H3 78 aa1.47□□□□□ -2.17
Scn3a-202ENSMUST00000100069 Gm11639A0A1D5RLM8 5808 aa1.45□□□□□ -2.18
Scn3a-202ENSMUST00000100069 ObscnA2AAJ9 8891 aaKnown RBP1.44□□□□□ -2.18
Scn3a-202ENSMUST00000100069 Gm45337A0A1B0GS71 263 aa1.44□□□□□ -2.18
Scn3a-202ENSMUST00000100069 Gm11568A2A4M2 211 aa1.43□□□□□ -2.18
Scn3a-202ENSMUST00000100069 Gm39115A0A1B0GSH7 232 aa1.42□□□□□ -2.18
Scn3a-202ENSMUST00000100069 Hmcn1D3YXG0 5634 aa1.42□□□□□ -2.18
Scn3a-202ENSMUST00000100069 Gm10229O08631 77 aa1.42□□□□□ -2.18
Scn3a-202ENSMUST00000100069 Krtap5-2Q9D5Z7 189 aa1.39□□□□□ -2.19
Scn3a-202ENSMUST00000100069 Gm2431E9Q8S1 172 aa1.37□□□□□ -2.19
Scn3a-202ENSMUST00000100069 Gm11567Q9D141 195 aa1.37□□□□□ -2.19
Scn3a-202ENSMUST00000100069 Muc16A0A140LJ72 8478 aa1.33□□□□□ -2.2
Scn3a-202ENSMUST00000100069 Phgr1Q8K0G7 91 aa1.3□□□□□ -2.2
Scn3a-202ENSMUST00000100069 Gm10153A0A1B0GRL1 320 aa1.3□□□□□ -2.2
Scn3a-202ENSMUST00000100069 Krtap9-1Q64526 186 aa1.28□□□□□ -2.2
Scn3a-202ENSMUST00000100069 Gm11559Q9D3H7 191 aa1.28□□□□□ -2.2
Scn3a-202ENSMUST00000100069 DstQ91ZU6 7393 aaKnown RBP1.26□□□□□ -2.21
Scn3a-202ENSMUST00000100069 Krtap5-1Q64507 230 aa1.24□□□□□ -2.21
Scn3a-202ENSMUST00000100069 Macf1Q9QXZ0 7354 aaKnown RBP1.23□□□□□ -2.21
Scn3a-202ENSMUST00000100069 Gm29735A0A1B0GT06 219 aa1.19□□□□□ -2.22
Scn3a-202ENSMUST00000100069 NebE9Q1W3 7152 aa1.16□□□□□ -2.22
Scn3a-202ENSMUST00000100069 Muc19Q6PZE0 7524 aa1.12□□□□□ -2.23
Scn3a-202ENSMUST00000100069 Krtap6-2O08884 159 aa1.1□□□□□ -2.23
Scn3a-202ENSMUST00000100069 AhnakE9Q616 5656 aaKnown RBP1.08□□□□□ -2.24
Scn3a-202ENSMUST00000100069 Krtap5-4Q62220 223 aa1.07□□□□□ -2.24
Scn3a-202ENSMUST00000100069 Gm4553A0A1B0GSA9 284 aa1.07□□□□□ -2.24
Scn3a-202ENSMUST00000100069 Krtap21-1Q925H4 128 aa1□□□□□ -2.25
Scn3a-202ENSMUST00000100069 Gm40460A0A1B0GR10 244 aa0.97□□□□□ -2.25
Scn3a-202ENSMUST00000100069 Gm7579A0A1B0GRJ4 243 aa0.97□□□□□ -2.25
Scn3a-202ENSMUST00000100069 Krtap5-5Q2TA51 241 aa0.97□□□□□ -2.25
Scn3a-202ENSMUST00000100069 Gm4559A4IF42 199 aa0.93□□□□□ -2.26
Retrieved 80 of 22,080 RNA–protein pairs in 150 ms