RNA–Protein interactions for RNA: ENSMUST00000094951.9

Scn1a-202, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn1a, Length 5,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-202ENSMUST00000094951 A0A1Y7VLE6 161 aa2.32□□□□□ -2.04
Scn1a-202ENSMUST00000094951 PcloQ9QYX7 5068 aa2.32□□□□□ -2.04
Scn1a-202ENSMUST00000094951 Muc5bE9Q5I3 4800 aa2.31□□□□□ -2.04
Scn1a-202ENSMUST00000094951 Gm11564A2A4L9 201 aa2.31□□□□□ -2.04
Scn1a-202ENSMUST00000094951 Gm11595B1AQA7 289 aa2.31□□□□□ -2.04
Scn1a-202ENSMUST00000094951 Krtap4-8B1AQA8 209 aa2.31□□□□□ -2.04
Scn1a-202ENSMUST00000094951 Krtap4-9B1AQA9 244 aa2.26□□□□□ -2.05
Scn1a-202ENSMUST00000094951 2300003K06RikA2A4M0 262 aa2.24□□□□□ -2.05
Scn1a-202ENSMUST00000094951 Gm11938Q9D3H4 131 aa2.24□□□□□ -2.05
Scn1a-202ENSMUST00000094951 Gm11559Q9D3H7 191 aa2.22□□□□□ -2.05
Scn1a-202ENSMUST00000094951 Sprr2hO70559 108 aa2.22□□□□□ -2.05
Scn1a-202ENSMUST00000094951 Mt3P28184 68 aa2.2□□□□□ -2.06
Scn1a-202ENSMUST00000094951 Pkhd1E9PZ36 4059 aa2.19□□□□□ -2.06
Scn1a-202ENSMUST00000094951 Mdn1A2ANY6 5589 aaKnown RBP2.16□□□□□ -2.06
Scn1a-202ENSMUST00000094951 Krtap4-13Q9D7P3 165 aa2.16□□□□□ -2.06
Scn1a-202ENSMUST00000094951 Lce1a1Q9CQH5 143 aa2.14□□□□□ -2.07
Scn1a-202ENSMUST00000094951 ZanO88799 5376 aa2.14□□□□□ -2.07
Scn1a-202ENSMUST00000094951 Syne2Q6ZWQ0 6874 aaKnown RBP2.14□□□□□ -2.07
Scn1a-202ENSMUST00000094951 Fsip2A2ARZ3 6995 aa2.13□□□□□ -2.07
Scn1a-202ENSMUST00000094951 Fat4Q2PZL6 4981 aa2.12□□□□□ -2.07
Scn1a-202ENSMUST00000094951 A030003K21RikA0A1Y7VIM3 128 aa2.12□□□□□ -2.07
Scn1a-202ENSMUST00000094951 Abca13Q5SSE9 5034 aa2.11□□□□□ -2.07
Scn1a-202ENSMUST00000094951 Lce1kJ3QP15 125 aa2.09□□□□□ -2.07
Scn1a-202ENSMUST00000094951 Ubr4A2AN08 5180 aa2.06□□□□□ -2.08
Scn1a-202ENSMUST00000094951 Sprr2dO70555 85 aa2.06□□□□□ -2.08
Scn1a-202ENSMUST00000094951 Lce1a2Q9D1K4 149 aa2.04□□□□□ -2.08
Scn1a-202ENSMUST00000094951 Krtap20-2E9Q0A8 60 aa2.02□□□□□ -2.09
Scn1a-202ENSMUST00000094951 Mt1P02802 61 aaKnown RBP2□□□□□ -2.09
Scn1a-202ENSMUST00000094951 SspoQ8CG65 4998 aa1.98□□□□□ -2.09
Scn1a-202ENSMUST00000094951 Gm6217A0A1Y7VJK9 128 aa1.97□□□□□ -2.09
Scn1a-202ENSMUST00000094951 Rnf213E9Q555 5152 aaKnown RBP1.97□□□□□ -2.09
Scn1a-202ENSMUST00000094951 Gm11554B1AQB2 190 aa1.93□□□□□ -2.1
Scn1a-202ENSMUST00000094951 Sprr2bO70554 98 aa1.92□□□□□ -2.1
Scn1a-202ENSMUST00000094951 Krtap28-10A0A1Y7VP58 119 aa1.91□□□□□ -2.1
Scn1a-202ENSMUST00000094951 A030005K14RikA0A1Y7VNY1 122 aa1.91□□□□□ -2.1
Scn1a-202ENSMUST00000094951 Macf1Q9QXZ0 7354 aaKnown RBP1.9□□□□□ -2.11
Scn1a-202ENSMUST00000094951 A0A1Y7VJH8 109 aa1.9□□□□□ -2.11
Scn1a-202ENSMUST00000094951 Gpr98Q8VHN7 6298 aaKnown RBP1.89□□□□□ -2.11
Scn1a-202ENSMUST00000094951 Ush2AQ2QI47 5193 aa1.89□□□□□ -2.11
Scn1a-202ENSMUST00000094951 Syne1Q6ZWR6 8799 aa1.86□□□□□ -2.11
Scn1a-202ENSMUST00000094951 Hmcn2A2AJ76 5100 aa1.86□□□□□ -2.11
Scn1a-202ENSMUST00000094951 NebE9Q1W3 7152 aa1.85□□□□□ -2.11
Scn1a-202ENSMUST00000094951 Krtap28-13A0A087WQP5 138 aa1.85□□□□□ -2.11
Scn1a-202ENSMUST00000094951 A030014E15RikA0A1Y7VJV2 120 aa1.84□□□□□ -2.11
Scn1a-202ENSMUST00000094951 Gm7544A0A1Y7VJ58 118 aa1.81□□□□□ -2.12
Scn1a-202ENSMUST00000094951 A0A1Y7VJ07 166 aa1.81□□□□□ -2.12
Scn1a-202ENSMUST00000094951 A030005L19RikA0A1Y7VIU2 113 aa1.8□□□□□ -2.12
Scn1a-202ENSMUST00000094951 ObscnA2AAJ9 8891 aaKnown RBP1.77□□□□□ -2.13
Scn1a-202ENSMUST00000094951 Kmt2dQ6PDK2 5588 aa1.76□□□□□ -2.13
Scn1a-202ENSMUST00000094951 DstQ91ZU6 7393 aaKnown RBP1.75□□□□□ -2.13
Scn1a-202ENSMUST00000094951 Krtap4-16Q91W93 202 aa1.74□□□□□ -2.13
Scn1a-202ENSMUST00000094951 Gm11639A0A1D5RLM8 5808 aa1.71□□□□□ -2.14
Scn1a-202ENSMUST00000094951 Muc16A0A140LJ72 8478 aa1.65□□□□□ -2.15
Scn1a-202ENSMUST00000094951 A0A286YCP9 139 aa1.59□□□□□ -2.15
Scn1a-202ENSMUST00000094951 1110025L11RikO09048 78 aa1.58□□□□□ -2.16
Scn1a-202ENSMUST00000094951 Krtap6-5Q925H3 78 aa1.58□□□□□ -2.16
Scn1a-202ENSMUST00000094951 Muc19Q6PZE0 7524 aa1.56□□□□□ -2.16
Scn1a-202ENSMUST00000094951 Krtap9-1Q64526 186 aa1.54□□□□□ -2.16
Scn1a-202ENSMUST00000094951 Hmcn1D3YXG0 5634 aa1.51□□□□□ -2.17
Scn1a-202ENSMUST00000094951 Gm10229O08631 77 aa1.51□□□□□ -2.17
Scn1a-202ENSMUST00000094951 Krtap5-2Q9D5Z7 189 aa1.47□□□□□ -2.17
Scn1a-202ENSMUST00000094951 Gm4553A0A1B0GSA9 284 aa1.44□□□□□ -2.18
Scn1a-202ENSMUST00000094951 Gm11568A2A4M2 211 aa1.44□□□□□ -2.18
Scn1a-202ENSMUST00000094951 Phgr1Q8K0G7 91 aa1.38□□□□□ -2.19
Scn1a-202ENSMUST00000094951 Gm2431E9Q8S1 172 aa1.35□□□□□ -2.19
Scn1a-202ENSMUST00000094951 AhnakE9Q616 5656 aaKnown RBP1.3□□□□□ -2.2
Scn1a-202ENSMUST00000094951 Gm40460A0A1B0GR10 244 aa1.25□□□□□ -2.21
Scn1a-202ENSMUST00000094951 Gm7579A0A1B0GRJ4 243 aa1.25□□□□□ -2.21
Scn1a-202ENSMUST00000094951 Krtap5-5Q2TA51 241 aa1.25□□□□□ -2.21
Scn1a-202ENSMUST00000094951 Krtap5-4Q62220 223 aa1.25□□□□□ -2.21
Scn1a-202ENSMUST00000094951 Gm45337A0A1B0GS71 263 aa1.23□□□□□ -2.21
Scn1a-202ENSMUST00000094951 Krtap6-2O08884 159 aa1.22□□□□□ -2.21
Scn1a-202ENSMUST00000094951 Gm39115A0A1B0GSH7 232 aa1.19□□□□□ -2.22
Scn1a-202ENSMUST00000094951 Gm11567Q9D141 195 aa1.18□□□□□ -2.22
Scn1a-202ENSMUST00000094951 Gm29735A0A1B0GT06 219 aa1.16□□□□□ -2.22
Scn1a-202ENSMUST00000094951 Gm10153A0A1B0GRL1 320 aa1.15□□□□□ -2.23
Scn1a-202ENSMUST00000094951 Gm45618A0A1B0GSA0 219 aa1.12□□□□□ -2.23
Scn1a-202ENSMUST00000094951 Krtap21-1Q925H4 128 aa1.08□□□□□ -2.24
Scn1a-202ENSMUST00000094951 Gm4559A4IF42 199 aa1.02□□□□□ -2.25
Scn1a-202ENSMUST00000094951 Krtap5-1Q64507 230 aa0.9□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 89.7 ms