RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Sprr2dO70555 85 aa4.83□□□□□ -1.64
Clcn3-203ENSMUST00000093490 Gm11564A2A4L9 201 aa4.83□□□□□ -1.64
Clcn3-203ENSMUST00000093490 Gm11563B1AQ90 168 aa4.83□□□□□ -1.64
Clcn3-203ENSMUST00000093490 Gm11595B1AQA7 289 aa4.83□□□□□ -1.64
Clcn3-203ENSMUST00000093490 Krtap4-8B1AQA8 209 aa4.83□□□□□ -1.64
Clcn3-203ENSMUST00000093490 Sprr2hO70559 108 aa4.8□□□□□ -1.64
Clcn3-203ENSMUST00000093490 Krtap4-9B1AQA9 244 aa4.75□□□□□ -1.65
Clcn3-203ENSMUST00000093490 Ubr4A2AN08 5180 aa4.74□□□□□ -1.65
Clcn3-203ENSMUST00000093490 2300003K06RikA2A4M0 262 aa4.74□□□□□ -1.65
Clcn3-203ENSMUST00000093490 Gm11938Q9D3H4 131 aa4.71□□□□□ -1.66
Clcn3-203ENSMUST00000093490 Krtap4-7Q9D732 168 aa4.71□□□□□ -1.66
Clcn3-203ENSMUST00000093490 Gm11562A0PK51 136 aa4.69□□□□□ -1.66
Clcn3-203ENSMUST00000093490 Krtap31-1Q9D644 177 aa4.68□□□□□ -1.66
Clcn3-203ENSMUST00000093490 Rnf213E9Q555 5152 aaKnown RBP4.66□□□□□ -1.66
Clcn3-203ENSMUST00000093490 Ush2AQ2QI47 5193 aa4.64□□□□□ -1.67
Clcn3-203ENSMUST00000093490 Krtap4-13Q9D7P3 165 aa4.59□□□□□ -1.68
Clcn3-203ENSMUST00000093490 Mt3P28184 68 aa4.54□□□□□ -1.68
Clcn3-203ENSMUST00000093490 Hmcn2A2AJ76 5100 aa4.54□□□□□ -1.68
Clcn3-203ENSMUST00000093490 Lce1kJ3QP15 125 aa4.53□□□□□ -1.68
Clcn3-203ENSMUST00000093490 Krtap6-3A0A087WQL6 57 aa4.53□□□□□ -1.68
Clcn3-203ENSMUST00000093490 Syne1Q6ZWR6 8799 aa4.48□□□□□ -1.69
Clcn3-203ENSMUST00000093490 A030003K21RikA0A1Y7VIM3 128 aa4.47□□□□□ -1.69
Clcn3-203ENSMUST00000093490 Syne2Q6ZWQ0 6874 aaKnown RBP4.44□□□□□ -1.7
Clcn3-203ENSMUST00000093490 Krtap17-1A2A5X6 109 aa4.43□□□□□ -1.7
Clcn3-203ENSMUST00000093490 SspoQ8CG65 4998 aa4.42□□□□□ -1.7
Clcn3-203ENSMUST00000093490 Lce1a1Q9CQH5 143 aa4.35□□□□□ -1.71
Clcn3-203ENSMUST00000093490 Mt1P02802 61 aaKnown RBP4.22□□□□□ -1.73
Clcn3-203ENSMUST00000093490 Fsip2A2ARZ3 6995 aa4.21□□□□□ -1.73
Clcn3-203ENSMUST00000093490 Krtap4-16Q91W93 202 aa4.19□□□□□ -1.74
Clcn3-203ENSMUST00000093490 Gm7544A0A1Y7VJ58 118 aa4.18□□□□□ -1.74
Clcn3-203ENSMUST00000093490 Eppk1Q8R0W0 6548 aa4.15□□□□□ -1.75
Clcn3-203ENSMUST00000093490 A0A1Y7VJH8 109 aa4.14□□□□□ -1.75
Clcn3-203ENSMUST00000093490 Gm6217A0A1Y7VJK9 128 aa4.12□□□□□ -1.75
Clcn3-203ENSMUST00000093490 Krtap28-10A0A1Y7VP58 119 aa4.12□□□□□ -1.75
Clcn3-203ENSMUST00000093490 Gm11554B1AQB2 190 aa4.07□□□□□ -1.76
Clcn3-203ENSMUST00000093490 Krtap20-2E9Q0A8 60 aa4.02□□□□□ -1.77
Clcn3-203ENSMUST00000093490 A030005K14RikA0A1Y7VNY1 122 aa4□□□□□ -1.77
Clcn3-203ENSMUST00000093490 A030005L19RikA0A1Y7VIU2 113 aa3.98□□□□□ -1.77
Clcn3-203ENSMUST00000093490 Gm11555B1AQ89 175 aa3.93□□□□□ -1.78
Clcn3-203ENSMUST00000093490 Sprr2bO70554 98 aa3.9□□□□□ -1.79
Clcn3-203ENSMUST00000093490 ObscnA2AAJ9 8891 aaKnown RBP3.83□□□□□ -1.8
Clcn3-203ENSMUST00000093490 Muc16A0A140LJ72 8478 aa3.78□□□□□ -1.8
Clcn3-203ENSMUST00000093490 Krtap28-13A0A087WQP5 138 aa3.78□□□□□ -1.8
Clcn3-203ENSMUST00000093490 Krtap31-2Q8CAY5 177 aa3.75□□□□□ -1.81
Clcn3-203ENSMUST00000093490 Macf1Q9QXZ0 7354 aaKnown RBP3.7□□□□□ -1.82
Clcn3-203ENSMUST00000093490 Kmt2dQ6PDK2 5588 aa3.56□□□□□ -1.84
Clcn3-203ENSMUST00000093490 A0A1Y7VJ07 166 aa3.56□□□□□ -1.84
Clcn3-203ENSMUST00000093490 DstQ91ZU6 7393 aaKnown RBP3.48□□□□□ -1.85
Clcn3-203ENSMUST00000093490 NebE9Q1W3 7152 aa3.43□□□□□ -1.86
Clcn3-203ENSMUST00000093490 Gm11559Q9D3H7 191 aa3.42□□□□□ -1.86
Clcn3-203ENSMUST00000093490 1110025L11RikO09048 78 aa3.41□□□□□ -1.86
Clcn3-203ENSMUST00000093490 Krtap6-5Q925H3 78 aa3.41□□□□□ -1.86
Clcn3-203ENSMUST00000093490 Gm11568A2A4M2 211 aa3.26□□□□□ -1.89
Clcn3-203ENSMUST00000093490 Krtap9-1Q64526 186 aa3.26□□□□□ -1.89
Clcn3-203ENSMUST00000093490 Gm10229O08631 77 aa3.22□□□□□ -1.89
Clcn3-203ENSMUST00000093490 Gm11639A0A1D5RLM8 5808 aa3.2□□□□□ -1.9
Clcn3-203ENSMUST00000093490 Gpr98Q8VHN7 6298 aaKnown RBP3.15□□□□□ -1.91
Clcn3-203ENSMUST00000093490 A030014E15RikA0A1Y7VJV2 120 aa3.12□□□□□ -1.91
Clcn3-203ENSMUST00000093490 Krtap5-2Q9D5Z7 189 aa3.11□□□□□ -1.91
Clcn3-203ENSMUST00000093490 Muc19Q6PZE0 7524 aa3.08□□□□□ -1.92
Clcn3-203ENSMUST00000093490 Phgr1Q8K0G7 91 aa2.96□□□□□ -1.94
Clcn3-203ENSMUST00000093490 Gm4553A0A1B0GSA9 284 aa2.96□□□□□ -1.94
Clcn3-203ENSMUST00000093490 Hmcn1D3YXG0 5634 aa2.82□□□□□ -1.96
Clcn3-203ENSMUST00000093490 A0A286YCP9 139 aa2.79□□□□□ -1.96
Clcn3-203ENSMUST00000093490 Gm2431E9Q8S1 172 aa2.71□□□□□ -1.98
Clcn3-203ENSMUST00000093490 AhnakE9Q616 5656 aaKnown RBP2.64□□□□□ -1.99
Clcn3-203ENSMUST00000093490 Gm10153A0A1B0GRL1 320 aa2.61□□□□□ -1.99
Clcn3-203ENSMUST00000093490 Krtap6-2O08884 159 aa2.6□□□□□ -1.99
Clcn3-203ENSMUST00000093490 Gm45337A0A1B0GS71 263 aa2.6□□□□□ -1.99
Clcn3-203ENSMUST00000093490 Gm40460A0A1B0GR10 244 aa2.59□□□□□ -1.99
Clcn3-203ENSMUST00000093490 Gm7579A0A1B0GRJ4 243 aa2.59□□□□□ -1.99
Clcn3-203ENSMUST00000093490 Krtap5-5Q2TA51 241 aa2.59□□□□□ -1.99
Clcn3-203ENSMUST00000093490 Krtap5-4Q62220 223 aa2.59□□□□□ -1.99
Clcn3-203ENSMUST00000093490 Gm39115A0A1B0GSH7 232 aa2.42□□□□□ -2.02
Clcn3-203ENSMUST00000093490 Krtap21-1Q925H4 128 aa2.42□□□□□ -2.02
Clcn3-203ENSMUST00000093490 Gm11567Q9D141 195 aa2.22□□□□□ -2.05
Clcn3-203ENSMUST00000093490 Gm45618A0A1B0GSA0 219 aa2.13□□□□□ -2.07
Clcn3-203ENSMUST00000093490 Gm29735A0A1B0GT06 219 aa1.97□□□□□ -2.09
Clcn3-203ENSMUST00000093490 Krtap5-1Q64507 230 aa1.49□□□□□ -2.17
Clcn3-203ENSMUST00000093490 Gm4559A4IF42 199 aa1.03□□□□□ -2.24
Retrieved 80 of 22,080 RNA–protein pairs in 71.7 ms