RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 Gm11563B1AQ90 168 aa6,33□□□□□ -1,4
Smarcc1-201ENSMUST00000088716 Gm11595B1AQA7 289 aa6,33□□□□□ -1,4
Smarcc1-201ENSMUST00000088716 Krtap4-8B1AQA8 209 aa6,33□□□□□ -1,4
Smarcc1-201ENSMUST00000088716 Sprr2dO70555 85 aa6,32□□□□□ -1,4
Smarcc1-201ENSMUST00000088716 Ubr4A2AN08 5180 aa6,32□□□□□ -1,4
Smarcc1-201ENSMUST00000088716 Krtap4-7Q9D732 168 aa6,28□□□□□ -1,4
Smarcc1-201ENSMUST00000088716 Krtap4-9B1AQA9 244 aa6,28□□□□□ -1,4
Smarcc1-201ENSMUST00000088716 Gm11938Q9D3H4 131 aa6,27□□□□□ -1,41
Smarcc1-201ENSMUST00000088716 Fat4Q2PZL6 4981 aa6,25□□□□□ -1,41
Smarcc1-201ENSMUST00000088716 ZanO88799 5376 aa6,21□□□□□ -1,41
Smarcc1-201ENSMUST00000088716 Krtap17-1A2A5X6 109 aa6,18□□□□□ -1,42
Smarcc1-201ENSMUST00000088716 Lce1kJ3QP15 125 aa6,17□□□□□ -1,42
Smarcc1-201ENSMUST00000088716 Muc5bE9Q5I3 4800 aa6,16□□□□□ -1,42
Smarcc1-201ENSMUST00000088716 Abca13Q5SSE9 5034 aa6,16□□□□□ -1,42
Smarcc1-201ENSMUST00000088716 Krtap4-13Q9D7P3 165 aa6,13□□□□□ -1,43
Smarcc1-201ENSMUST00000088716 Syne1Q6ZWR6 8799 aa6,12□□□□□ -1,43
Smarcc1-201ENSMUST00000088716 Hmcn2A2AJ76 5100 aa6,12□□□□□ -1,43
Smarcc1-201ENSMUST00000088716 Mt3P28184 68 aa6,08□□□□□ -1,44
Smarcc1-201ENSMUST00000088716 Rnf213E9Q555 5152 aaKnown RBP5,88□□□□□ -1,47
Smarcc1-201ENSMUST00000088716 Fsip2A2ARZ3 6995 aa5,79□□□□□ -1,48
Smarcc1-201ENSMUST00000088716 Krtap4-16Q91W93 202 aa5,77□□□□□ -1,48
Smarcc1-201ENSMUST00000088716 Syne2Q6ZWQ0 6874 aaKnown RBP5,76□□□□□ -1,49
Smarcc1-201ENSMUST00000088716 Lce1a1Q9CQH5 143 aa5,73□□□□□ -1,49
Smarcc1-201ENSMUST00000088716 Ush2AQ2QI47 5193 aa5,71□□□□□ -1,5
Smarcc1-201ENSMUST00000088716 Krtap6-3A0A087WQL6 57 aa5,67□□□□□ -1,5
Smarcc1-201ENSMUST00000088716 SspoQ8CG65 4998 aa5,58□□□□□ -1,52
Smarcc1-201ENSMUST00000088716 Mt1P02802 61 aaKnown RBP5,56□□□□□ -1,52
Smarcc1-201ENSMUST00000088716 Gm11554B1AQB2 190 aa5,53□□□□□ -1,52
Smarcc1-201ENSMUST00000088716 Sprr2bO70554 98 aa5,44□□□□□ -1,54
Smarcc1-201ENSMUST00000088716 Krtap20-2E9Q0A8 60 aa5,32□□□□□ -1,56
Smarcc1-201ENSMUST00000088716 ObscnA2AAJ9 8891 aaKnown RBP5,14□□□□□ -1,59
Smarcc1-201ENSMUST00000088716 Krtap31-2Q8CAY5 177 aa5,14□□□□□ -1,59
Smarcc1-201ENSMUST00000088716 Muc16A0A140LJ72 8478 aa5,01□□□□□ -1,61
Smarcc1-201ENSMUST00000088716 Eppk1Q8R0W0 6548 aa4,9□□□□□ -1,63
Smarcc1-201ENSMUST00000088716 Gm11555B1AQ89 175 aa4,72□□□□□ -1,65
Smarcc1-201ENSMUST00000088716 Kmt2dQ6PDK2 5588 aa4,7□□□□□ -1,66
Smarcc1-201ENSMUST00000088716 DstQ91ZU6 7393 aaKnown RBP4,66□□□□□ -1,66
Smarcc1-201ENSMUST00000088716 Macf1Q9QXZ0 7354 aaKnown RBP4,66□□□□□ -1,66
Smarcc1-201ENSMUST00000088716 1110025L11RikO09048 78 aa4,58□□□□□ -1,68
Smarcc1-201ENSMUST00000088716 Krtap6-5Q925H3 78 aa4,58□□□□□ -1,68
Smarcc1-201ENSMUST00000088716 NebE9Q1W3 7152 aa4,5□□□□□ -1,69
Smarcc1-201ENSMUST00000088716 Gm10229O08631 77 aa4,35□□□□□ -1,71
Smarcc1-201ENSMUST00000088716 Gm11559Q9D3H7 191 aa4,25□□□□□ -1,73
Smarcc1-201ENSMUST00000088716 Gm11568A2A4M2 211 aa4,19□□□□□ -1,74
Smarcc1-201ENSMUST00000088716 Krtap9-1Q64526 186 aa4,19□□□□□ -1,74
Smarcc1-201ENSMUST00000088716 Phgr1Q8K0G7 91 aa4,07□□□□□ -1,76
Smarcc1-201ENSMUST00000088716 Muc19Q6PZE0 7524 aa4,06□□□□□ -1,76
Smarcc1-201ENSMUST00000088716 Gm11639A0A1D5RLM8 5808 aa3,96□□□□□ -1,78
Smarcc1-201ENSMUST00000088716 Gpr98Q8VHN7 6298 aaKnown RBP3,81□□□□□ -1,8
Smarcc1-201ENSMUST00000088716 Krtap5-2Q9D5Z7 189 aa3,69□□□□□ -1,82
Smarcc1-201ENSMUST00000088716 Hmcn1D3YXG0 5634 aa3,54□□□□□ -1,84
Smarcc1-201ENSMUST00000088716 Krtap6-2O08884 159 aa3,48□□□□□ -1,85
Smarcc1-201ENSMUST00000088716 Gm4553A0A1B0GSA9 284 aa3,47□□□□□ -1,85
Smarcc1-201ENSMUST00000088716 Gm2431E9Q8S1 172 aa3,26□□□□□ -1,89
Smarcc1-201ENSMUST00000088716 Krtap21-1Q925H4 128 aa3,2□□□□□ -1,9
Smarcc1-201ENSMUST00000088716 AhnakE9Q616 5656 aaKnown RBP3,19□□□□□ -1,9
Smarcc1-201ENSMUST00000088716 Gm10153A0A1B0GRL1 320 aa3,1□□□□□ -1,91
Smarcc1-201ENSMUST00000088716 A030005L19RikA0A1Y7VIU2 113 aa3,09□□□□□ -1,91
Smarcc1-201ENSMUST00000088716 Gm45337A0A1B0GS71 263 aa2,94□□□□□ -1,94
Smarcc1-201ENSMUST00000088716 Gm11567Q9D141 195 aa2,92□□□□□ -1,94
Smarcc1-201ENSMUST00000088716 Gm40460A0A1B0GR10 244 aa2,92□□□□□ -1,94
Smarcc1-201ENSMUST00000088716 Gm7579A0A1B0GRJ4 243 aa2,92□□□□□ -1,94
Smarcc1-201ENSMUST00000088716 Krtap5-5Q2TA51 241 aa2,92□□□□□ -1,94
Smarcc1-201ENSMUST00000088716 Krtap5-4Q62220 223 aa2,92□□□□□ -1,94
Smarcc1-201ENSMUST00000088716 A0A1Y7VLE6 161 aa2,88□□□□□ -1,95
Smarcc1-201ENSMUST00000088716 A0A1Y7VJH8 109 aa2,71□□□□□ -1,98
Smarcc1-201ENSMUST00000088716 Gm39115A0A1B0GSH7 232 aa2,69□□□□□ -1,98
Smarcc1-201ENSMUST00000088716 Krtap28-10A0A1Y7VP58 119 aa2,68□□□□□ -1,98
Smarcc1-201ENSMUST00000088716 A030005K14RikA0A1Y7VNY1 122 aa2,65□□□□□ -1,98
Smarcc1-201ENSMUST00000088716 A030003K21RikA0A1Y7VIM3 128 aa2,64□□□□□ -1,99
Smarcc1-201ENSMUST00000088716 Krtap28-13A0A087WQP5 138 aa2,64□□□□□ -1,99
Smarcc1-201ENSMUST00000088716 A0A1Y7VJ07 166 aa2,59□□□□□ -1,99
Smarcc1-201ENSMUST00000088716 Gm7544A0A1Y7VJ58 118 aa2,52□□□□□ -2,01
Smarcc1-201ENSMUST00000088716 Gm6217A0A1Y7VJK9 128 aa2,52□□□□□ -2,01
Smarcc1-201ENSMUST00000088716 A030014E15RikA0A1Y7VJV2 120 aa2,45□□□□□ -2,02
Smarcc1-201ENSMUST00000088716 Gm45618A0A1B0GSA0 219 aa2,24□□□□□ -2,05
Smarcc1-201ENSMUST00000088716 Gm29735A0A1B0GT06 219 aa2,21□□□□□ -2,06
Smarcc1-201ENSMUST00000088716 A0A286YCP9 139 aa1,98□□□□□ -2,09
Smarcc1-201ENSMUST00000088716 Krtap5-1Q64507 230 aa1,82□□□□□ -2,12
Smarcc1-201ENSMUST00000088716 Gm4559A4IF42 199 aa1,15□□□□□ -2,23
Retrieved 80 of 22,080 RNA–protein pairs in 9,3 ms