RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Krtap17-1A2A5X6 109 aa2.95□□□□□ -1.94
Prpf40a-201ENSMUST00000076313 Ubr4A2AN08 5180 aa2.93□□□□□ -1.94
Prpf40a-201ENSMUST00000076313 Sprr2fO70557 76 aa2.93□□□□□ -1.94
Prpf40a-201ENSMUST00000076313 A030005K14RikA0A1Y7VNY1 122 aa2.9□□□□□ -1.95
Prpf40a-201ENSMUST00000076313 4932415D10RikA0A1W2P6U8 4986 aa2.89□□□□□ -1.95
Prpf40a-201ENSMUST00000076313 Fat4Q2PZL6 4981 aa2.86□□□□□ -1.95
Prpf40a-201ENSMUST00000076313 Krtap4-1Q3UUY3 169 aa2.86□□□□□ -1.95
Prpf40a-201ENSMUST00000076313 Syne1Q6ZWR6 8799 aa2.85□□□□□ -1.95
Prpf40a-201ENSMUST00000076313 ZanO88799 5376 aa2.85□□□□□ -1.95
Prpf40a-201ENSMUST00000076313 A0A1Y7VJ07 166 aa2.83□□□□□ -1.96
Prpf40a-201ENSMUST00000076313 Krtap31-1Q9D644 177 aa2.83□□□□□ -1.96
Prpf40a-201ENSMUST00000076313 Fsip2A2ARZ3 6995 aa2.8□□□□□ -1.96
Prpf40a-201ENSMUST00000076313 Gm11596B1AQB0 205 aa2.8□□□□□ -1.96
Prpf40a-201ENSMUST00000076313 Hmcn2A2AJ76 5100 aa2.79□□□□□ -1.96
Prpf40a-201ENSMUST00000076313 2300003K06RikA2A4M0 262 aa2.79□□□□□ -1.96
Prpf40a-201ENSMUST00000076313 Gm11564A2A4L9 201 aa2.79□□□□□ -1.96
Prpf40a-201ENSMUST00000076313 Gm11563B1AQ90 168 aa2.79□□□□□ -1.96
Prpf40a-201ENSMUST00000076313 Gm11595B1AQA7 289 aa2.79□□□□□ -1.96
Prpf40a-201ENSMUST00000076313 Krtap4-8B1AQA8 209 aa2.79□□□□□ -1.96
Prpf40a-201ENSMUST00000076313 Sprr2dO70555 85 aa2.79□□□□□ -1.96
Prpf40a-201ENSMUST00000076313 Krtap4-9B1AQA9 244 aa2.78□□□□□ -1.96
Prpf40a-201ENSMUST00000076313 Sprr2hO70559 108 aa2.78□□□□□ -1.96
Prpf40a-201ENSMUST00000076313 Gm11938Q9D3H4 131 aa2.78□□□□□ -1.96
Prpf40a-201ENSMUST00000076313 Krtap4-7Q9D732 168 aa2.74□□□□□ -1.97
Prpf40a-201ENSMUST00000076313 Ush2AQ2QI47 5193 aa2.74□□□□□ -1.97
Prpf40a-201ENSMUST00000076313 Krtap4-13Q9D7P3 165 aa2.73□□□□□ -1.97
Prpf40a-201ENSMUST00000076313 Rnf213E9Q555 5152 aaKnown RBP2.71□□□□□ -1.98
Prpf40a-201ENSMUST00000076313 Gm11562A0PK51 136 aa2.71□□□□□ -1.98
Prpf40a-201ENSMUST00000076313 Syne2Q6ZWQ0 6874 aaKnown RBP2.69□□□□□ -1.98
Prpf40a-201ENSMUST00000076313 Lce1kJ3QP15 125 aa2.68□□□□□ -1.98
Prpf40a-201ENSMUST00000076313 Muc5bE9Q5I3 4800 aa2.68□□□□□ -1.98
Prpf40a-201ENSMUST00000076313 Krtap4-16Q91W93 202 aa2.66□□□□□ -1.98
Prpf40a-201ENSMUST00000076313 A030014E15RikA0A1Y7VJV2 120 aa2.6□□□□□ -1.99
Prpf40a-201ENSMUST00000076313 Mt3P28184 68 aa2.52□□□□□ -2.01
Prpf40a-201ENSMUST00000076313 Muc16A0A140LJ72 8478 aa2.51□□□□□ -2.01
Prpf40a-201ENSMUST00000076313 Lce1a1Q9CQH5 143 aa2.5□□□□□ -2.01
Prpf40a-201ENSMUST00000076313 SspoQ8CG65 4998 aa2.48□□□□□ -2.01
Prpf40a-201ENSMUST00000076313 Gm11554B1AQB2 190 aa2.45□□□□□ -2.02
Prpf40a-201ENSMUST00000076313 Krtap6-3A0A087WQL6 57 aa2.38□□□□□ -2.03
Prpf40a-201ENSMUST00000076313 Krtap20-2E9Q0A8 60 aa2.36□□□□□ -2.03
Prpf40a-201ENSMUST00000076313 Mt1P02802 61 aaKnown RBP2.35□□□□□ -2.03
Prpf40a-201ENSMUST00000076313 Macf1Q9QXZ0 7354 aaKnown RBP2.29□□□□□ -2.04
Prpf40a-201ENSMUST00000076313 Sprr2bO70554 98 aa2.27□□□□□ -2.05
Prpf40a-201ENSMUST00000076313 Gm11555B1AQ89 175 aa2.25□□□□□ -2.05
Prpf40a-201ENSMUST00000076313 ObscnA2AAJ9 8891 aaKnown RBP2.22□□□□□ -2.05
Prpf40a-201ENSMUST00000076313 NebE9Q1W3 7152 aa2.14□□□□□ -2.07
Prpf40a-201ENSMUST00000076313 DstQ91ZU6 7393 aaKnown RBP2.1□□□□□ -2.07
Prpf40a-201ENSMUST00000076313 Muc19Q6PZE0 7524 aa2.1□□□□□ -2.07
Prpf40a-201ENSMUST00000076313 A0A286YCP9 139 aa2.06□□□□□ -2.08
Prpf40a-201ENSMUST00000076313 Krtap31-2Q8CAY5 177 aa2.03□□□□□ -2.08
Prpf40a-201ENSMUST00000076313 Kmt2dQ6PDK2 5588 aa1.99□□□□□ -2.09
Prpf40a-201ENSMUST00000076313 1110025L11RikO09048 78 aa1.94□□□□□ -2.1
Prpf40a-201ENSMUST00000076313 Krtap6-5Q925H3 78 aa1.94□□□□□ -2.1
Prpf40a-201ENSMUST00000076313 Eppk1Q8R0W0 6548 aa1.9□□□□□ -2.11
Prpf40a-201ENSMUST00000076313 Gm11568A2A4M2 211 aa1.88□□□□□ -2.11
Prpf40a-201ENSMUST00000076313 Krtap9-1Q64526 186 aa1.88□□□□□ -2.11
Prpf40a-201ENSMUST00000076313 Gm10229O08631 77 aa1.84□□□□□ -2.11
Prpf40a-201ENSMUST00000076313 Gm11559Q9D3H7 191 aa1.84□□□□□ -2.11
Prpf40a-201ENSMUST00000076313 Phgr1Q8K0G7 91 aa1.81□□□□□ -2.12
Prpf40a-201ENSMUST00000076313 Gm11639A0A1D5RLM8 5808 aa1.6□□□□□ -2.15
Prpf40a-201ENSMUST00000076313 Krtap5-2Q9D5Z7 189 aa1.6□□□□□ -2.15
Prpf40a-201ENSMUST00000076313 Gpr98Q8VHN7 6298 aaKnown RBP1.59□□□□□ -2.15
Prpf40a-201ENSMUST00000076313 Hmcn1D3YXG0 5634 aa1.59□□□□□ -2.15
Prpf40a-201ENSMUST00000076313 Gm4553A0A1B0GSA9 284 aa1.49□□□□□ -2.17
Prpf40a-201ENSMUST00000076313 Krtap6-2O08884 159 aa1.47□□□□□ -2.17
Prpf40a-201ENSMUST00000076313 Gm2431E9Q8S1 172 aa1.45□□□□□ -2.18
Prpf40a-201ENSMUST00000076313 Krtap21-1Q925H4 128 aa1.39□□□□□ -2.19
Prpf40a-201ENSMUST00000076313 Gm10153A0A1B0GRL1 320 aa1.38□□□□□ -2.19
Prpf40a-201ENSMUST00000076313 Gm11567Q9D141 195 aa1.37□□□□□ -2.19
Prpf40a-201ENSMUST00000076313 AhnakE9Q616 5656 aaKnown RBP1.36□□□□□ -2.19
Prpf40a-201ENSMUST00000076313 Gm45618A0A1B0GSA0 219 aa1.34□□□□□ -2.2
Prpf40a-201ENSMUST00000076313 Gm39115A0A1B0GSH7 232 aa1.3□□□□□ -2.2
Prpf40a-201ENSMUST00000076313 Gm45337A0A1B0GS71 263 aa1.27□□□□□ -2.21
Prpf40a-201ENSMUST00000076313 Gm40460A0A1B0GR10 244 aa1.23□□□□□ -2.21
Prpf40a-201ENSMUST00000076313 Gm7579A0A1B0GRJ4 243 aa1.23□□□□□ -2.21
Prpf40a-201ENSMUST00000076313 Krtap5-5Q2TA51 241 aa1.23□□□□□ -2.21
Prpf40a-201ENSMUST00000076313 Krtap5-4Q62220 223 aa1.23□□□□□ -2.21
Prpf40a-201ENSMUST00000076313 Gm29735A0A1B0GT06 219 aa1.14□□□□□ -2.23
Prpf40a-201ENSMUST00000076313 Krtap5-1Q64507 230 aa0.98□□□□□ -2.25
Prpf40a-201ENSMUST00000076313 Gm4559A4IF42 199 aa0.79□□□□□ -2.28
Retrieved 80 of 22,080 RNA–protein pairs in 121.6 ms