RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Krtap4-8B1AQA8 209 aa3.41□□□□□ -1.86
Vcpip1-201ENSMUST00000057438 Gm6217A0A1Y7VJK9 128 aa3.39□□□□□ -1.87
Vcpip1-201ENSMUST00000057438 Lce1a1Q9CQH5 143 aa3.39□□□□□ -1.87
Vcpip1-201ENSMUST00000057438 Krtap4-9B1AQA9 244 aa3.38□□□□□ -1.87
Vcpip1-201ENSMUST00000057438 Ryr2E9Q401 4966 aaKnown RBP3.35□□□□□ -1.87
Vcpip1-201ENSMUST00000057438 PcloQ9QYX7 5068 aa3.35□□□□□ -1.87
Vcpip1-201ENSMUST00000057438 Krtap4-13Q9D7P3 165 aa3.33□□□□□ -1.88
Vcpip1-201ENSMUST00000057438 Herc2Q4U2R1 4836 aa3.32□□□□□ -1.88
Vcpip1-201ENSMUST00000057438 Krtap4-16Q91W93 202 aa3.31□□□□□ -1.88
Vcpip1-201ENSMUST00000057438 ZanO88799 5376 aa3.3□□□□□ -1.88
Vcpip1-201ENSMUST00000057438 Lce1kJ3QP15 125 aa3.3□□□□□ -1.88
Vcpip1-201ENSMUST00000057438 Ryr3A2AGL3 4863 aa3.28□□□□□ -1.88
Vcpip1-201ENSMUST00000057438 Mt1P02802 61 aaKnown RBP3.23□□□□□ -1.89
Vcpip1-201ENSMUST00000057438 Krtap6-3A0A087WQL6 57 aa3.19□□□□□ -1.9
Vcpip1-201ENSMUST00000057438 Syne2Q6ZWQ0 6874 aaKnown RBP3.18□□□□□ -1.9
Vcpip1-201ENSMUST00000057438 Syne1Q6ZWR6 8799 aa3.15□□□□□ -1.91
Vcpip1-201ENSMUST00000057438 A030005K14RikA0A1Y7VNY1 122 aa3.12□□□□□ -1.91
Vcpip1-201ENSMUST00000057438 Krtap28-10A0A1Y7VP58 119 aa3.11□□□□□ -1.91
Vcpip1-201ENSMUST00000057438 Krtap17-1A2A5X6 109 aa3.08□□□□□ -1.92
Vcpip1-201ENSMUST00000057438 Gm11554B1AQB2 190 aa3.06□□□□□ -1.92
Vcpip1-201ENSMUST00000057438 A0A1Y7VJH8 109 aa3.04□□□□□ -1.92
Vcpip1-201ENSMUST00000057438 Gm7544A0A1Y7VJ58 118 aa3□□□□□ -1.93
Vcpip1-201ENSMUST00000057438 Herc1E9PZP8 4859 aa3□□□□□ -1.93
Vcpip1-201ENSMUST00000057438 Krtap28-13A0A087WQP5 138 aa2.96□□□□□ -1.93
Vcpip1-201ENSMUST00000057438 Hmcn2A2AJ76 5100 aa2.96□□□□□ -1.94
Vcpip1-201ENSMUST00000057438 Muc5bE9Q5I3 4800 aa2.95□□□□□ -1.94
Vcpip1-201ENSMUST00000057438 Birc6O88738 4882 aa2.93□□□□□ -1.94
Vcpip1-201ENSMUST00000057438 A030005L19RikA0A1Y7VIU2 113 aa2.93□□□□□ -1.94
Vcpip1-201ENSMUST00000057438 Kiaa1109A2AAE1 5005 aa2.9□□□□□ -1.95
Vcpip1-201ENSMUST00000057438 Fsip2A2ARZ3 6995 aa2.89□□□□□ -1.95
Vcpip1-201ENSMUST00000057438 A0A1Y7VJ07 166 aa2.89□□□□□ -1.95
Vcpip1-201ENSMUST00000057438 Mdn1A2ANY6 5589 aaKnown RBP2.89□□□□□ -1.95
Vcpip1-201ENSMUST00000057438 Ubr4A2AN08 5180 aa2.87□□□□□ -1.95
Vcpip1-201ENSMUST00000057438 Krtap20-2E9Q0A8 60 aa2.83□□□□□ -1.96
Vcpip1-201ENSMUST00000057438 ObscnA2AAJ9 8891 aaKnown RBP2.79□□□□□ -1.96
Vcpip1-201ENSMUST00000057438 4932415D10RikA0A1W2P6U8 4986 aa2.78□□□□□ -1.96
Vcpip1-201ENSMUST00000057438 SspoQ8CG65 4998 aa2.66□□□□□ -1.98
Vcpip1-201ENSMUST00000057438 Abca13Q5SSE9 5034 aa2.64□□□□□ -1.99
Vcpip1-201ENSMUST00000057438 A030014E15RikA0A1Y7VJV2 120 aa2.6□□□□□ -1.99
Vcpip1-201ENSMUST00000057438 1110025L11RikO09048 78 aa2.6□□□□□ -1.99
Vcpip1-201ENSMUST00000057438 Krtap6-5Q925H3 78 aa2.6□□□□□ -1.99
Vcpip1-201ENSMUST00000057438 HydinQ80W93 5154 aa2.6□□□□□ -1.99
Vcpip1-201ENSMUST00000057438 Fat4Q2PZL6 4981 aa2.56□□□□□ -2
Vcpip1-201ENSMUST00000057438 Gm11555B1AQ89 175 aa2.51□□□□□ -2.01
Vcpip1-201ENSMUST00000057438 Gm10229O08631 77 aa2.5□□□□□ -2.01
Vcpip1-201ENSMUST00000057438 Rnf213E9Q555 5152 aaKnown RBP2.48□□□□□ -2.01
Vcpip1-201ENSMUST00000057438 Eppk1Q8R0W0 6548 aa2.46□□□□□ -2.02
Vcpip1-201ENSMUST00000057438 Ush2AQ2QI47 5193 aa2.4□□□□□ -2.03
Vcpip1-201ENSMUST00000057438 Phgr1Q8K0G7 91 aa2.39□□□□□ -2.03
Vcpip1-201ENSMUST00000057438 Muc16A0A140LJ72 8478 aa2.34□□□□□ -2.03
Vcpip1-201ENSMUST00000057438 Kmt2dQ6PDK2 5588 aa2.26□□□□□ -2.05
Vcpip1-201ENSMUST00000057438 Macf1Q9QXZ0 7354 aaKnown RBP2.24□□□□□ -2.05
Vcpip1-201ENSMUST00000057438 Gm11559Q9D3H7 191 aa2.21□□□□□ -2.06
Vcpip1-201ENSMUST00000057438 A0A286YCP9 139 aa2.18□□□□□ -2.06
Vcpip1-201ENSMUST00000057438 DstQ91ZU6 7393 aaKnown RBP2.15□□□□□ -2.07
Vcpip1-201ENSMUST00000057438 NebE9Q1W3 7152 aa2.12□□□□□ -2.07
Vcpip1-201ENSMUST00000057438 Gm11568A2A4M2 211 aa2.09□□□□□ -2.07
Vcpip1-201ENSMUST00000057438 Krtap9-1Q64526 186 aa2.09□□□□□ -2.07
Vcpip1-201ENSMUST00000057438 Gm11567Q9D141 195 aa2.03□□□□□ -2.08
Vcpip1-201ENSMUST00000057438 Muc19Q6PZE0 7524 aa1.99□□□□□ -2.09
Vcpip1-201ENSMUST00000057438 Krtap6-2O08884 159 aa1.96□□□□□ -2.1
Vcpip1-201ENSMUST00000057438 Krtap5-2Q9D5Z7 189 aa1.88□□□□□ -2.11
Vcpip1-201ENSMUST00000057438 Gpr98Q8VHN7 6298 aaKnown RBP1.87□□□□□ -2.11
Vcpip1-201ENSMUST00000057438 Krtap21-1Q925H4 128 aa1.79□□□□□ -2.12
Vcpip1-201ENSMUST00000057438 Hmcn1D3YXG0 5634 aa1.79□□□□□ -2.12
Vcpip1-201ENSMUST00000057438 Gm11639A0A1D5RLM8 5808 aa1.75□□□□□ -2.13
Vcpip1-201ENSMUST00000057438 Gm4553A0A1B0GSA9 284 aa1.73□□□□□ -2.13
Vcpip1-201ENSMUST00000057438 Gm10153A0A1B0GRL1 320 aa1.57□□□□□ -2.16
Vcpip1-201ENSMUST00000057438 Gm2431E9Q8S1 172 aa1.54□□□□□ -2.16
Vcpip1-201ENSMUST00000057438 Gm45337A0A1B0GS71 263 aa1.46□□□□□ -2.18
Vcpip1-201ENSMUST00000057438 Gm40460A0A1B0GR10 244 aa1.42□□□□□ -2.18
Vcpip1-201ENSMUST00000057438 Gm7579A0A1B0GRJ4 243 aa1.42□□□□□ -2.18
Vcpip1-201ENSMUST00000057438 Krtap5-5Q2TA51 241 aa1.42□□□□□ -2.18
Vcpip1-201ENSMUST00000057438 Krtap5-4Q62220 223 aa1.42□□□□□ -2.18
Vcpip1-201ENSMUST00000057438 Gm39115A0A1B0GSH7 232 aa1.4□□□□□ -2.18
Vcpip1-201ENSMUST00000057438 AhnakE9Q616 5656 aaKnown RBP1.34□□□□□ -2.2
Vcpip1-201ENSMUST00000057438 Gm45618A0A1B0GSA0 219 aa1.3□□□□□ -2.2
Vcpip1-201ENSMUST00000057438 Gm29735A0A1B0GT06 219 aa1.17□□□□□ -2.22
Vcpip1-201ENSMUST00000057438 Krtap5-1Q64507 230 aa1.06□□□□□ -2.24
Vcpip1-201ENSMUST00000057438 Gm4559A4IF42 199 aa0.78□□□□□ -2.28
Retrieved 80 of 22,080 RNA–protein pairs in 57.2 ms