RNA–Protein interactions for RNA: ENSMUST00000056889.14

Chd4-201, Transcript of Chromodomain-helicase-DNA-binding protein 4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Chd4, Length 6,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4-201ENSMUST00000056889 Krtap17-1A2A5X6 109 aa4.19□□□□□ -1.74
Chd4-201ENSMUST00000056889 Krtap4-13Q9D7P3 165 aa4.19□□□□□ -1.74
Chd4-201ENSMUST00000056889 Ryr2E9Q401 4966 aaKnown RBP4.19□□□□□ -1.74
Chd4-201ENSMUST00000056889 Herc2Q4U2R1 4836 aa4.14□□□□□ -1.75
Chd4-201ENSMUST00000056889 Lce1kJ3QP15 125 aa4.13□□□□□ -1.75
Chd4-201ENSMUST00000056889 Lce1a1Q9CQH5 143 aa4.12□□□□□ -1.75
Chd4-201ENSMUST00000056889 Sprr2bO70554 98 aa4.06□□□□□ -1.76
Chd4-201ENSMUST00000056889 PcloQ9QYX7 5068 aa4.06□□□□□ -1.76
Chd4-201ENSMUST00000056889 HydinQ80W93 5154 aa4.06□□□□□ -1.76
Chd4-201ENSMUST00000056889 Syne2Q6ZWQ0 6874 aaKnown RBP3.99□□□□□ -1.77
Chd4-201ENSMUST00000056889 Syne1Q6ZWR6 8799 aa3.98□□□□□ -1.77
Chd4-201ENSMUST00000056889 Mt3P28184 68 aa3.96□□□□□ -1.77
Chd4-201ENSMUST00000056889 Kiaa1109A2AAE1 5005 aa3.96□□□□□ -1.78
Chd4-201ENSMUST00000056889 Fsip2A2ARZ3 6995 aa3.94□□□□□ -1.78
Chd4-201ENSMUST00000056889 Hmcn2A2AJ76 5100 aa3.93□□□□□ -1.78
Chd4-201ENSMUST00000056889 Gm11554B1AQB2 190 aa3.9□□□□□ -1.79
Chd4-201ENSMUST00000056889 Mdn1A2ANY6 5589 aaKnown RBP3.82□□□□□ -1.8
Chd4-201ENSMUST00000056889 Birc6O88738 4882 aa3.81□□□□□ -1.8
Chd4-201ENSMUST00000056889 Krtap31-2Q8CAY5 177 aa3.75□□□□□ -1.81
Chd4-201ENSMUST00000056889 Ubr4A2AN08 5180 aa3.64□□□□□ -1.83
Chd4-201ENSMUST00000056889 Mt1P02802 61 aaKnown RBP3.53□□□□□ -1.84
Chd4-201ENSMUST00000056889 Abca13Q5SSE9 5034 aa3.52□□□□□ -1.85
Chd4-201ENSMUST00000056889 ZanO88799 5376 aa3.52□□□□□ -1.85
Chd4-201ENSMUST00000056889 Krtap6-3A0A087WQL6 57 aa3.52□□□□□ -1.85
Chd4-201ENSMUST00000056889 Muc5bE9Q5I3 4800 aa3.51□□□□□ -1.85
Chd4-201ENSMUST00000056889 Krtap20-2E9Q0A8 60 aa3.48□□□□□ -1.85
Chd4-201ENSMUST00000056889 4932415D10RikA0A1W2P6U8 4986 aa3.48□□□□□ -1.85
Chd4-201ENSMUST00000056889 Fat4Q2PZL6 4981 aa3.47□□□□□ -1.85
Chd4-201ENSMUST00000056889 Muc16A0A140LJ72 8478 aa3.3□□□□□ -1.88
Chd4-201ENSMUST00000056889 Rnf213E9Q555 5152 aaKnown RBP3.3□□□□□ -1.88
Chd4-201ENSMUST00000056889 ObscnA2AAJ9 8891 aaKnown RBP3.18□□□□□ -1.9
Chd4-201ENSMUST00000056889 SspoQ8CG65 4998 aa3.13□□□□□ -1.91
Chd4-201ENSMUST00000056889 Ush2AQ2QI47 5193 aa3.11□□□□□ -1.91
Chd4-201ENSMUST00000056889 Gm11555B1AQ89 175 aa3.03□□□□□ -1.92
Chd4-201ENSMUST00000056889 1110025L11RikO09048 78 aa2.96□□□□□ -1.94
Chd4-201ENSMUST00000056889 Krtap6-5Q925H3 78 aa2.96□□□□□ -1.94
Chd4-201ENSMUST00000056889 Phgr1Q8K0G7 91 aa2.95□□□□□ -1.94
Chd4-201ENSMUST00000056889 NebE9Q1W3 7152 aa2.91□□□□□ -1.94
Chd4-201ENSMUST00000056889 Gm10229O08631 77 aa2.87□□□□□ -1.95
Chd4-201ENSMUST00000056889 Muc19Q6PZE0 7524 aa2.83□□□□□ -1.96
Chd4-201ENSMUST00000056889 Macf1Q9QXZ0 7354 aaKnown RBP2.82□□□□□ -1.96
Chd4-201ENSMUST00000056889 DstQ91ZU6 7393 aaKnown RBP2.81□□□□□ -1.96
Chd4-201ENSMUST00000056889 Kmt2dQ6PDK2 5588 aa2.79□□□□□ -1.96
Chd4-201ENSMUST00000056889 Eppk1Q8R0W0 6548 aa2.76□□□□□ -1.97
Chd4-201ENSMUST00000056889 Gm11568A2A4M2 211 aa2.63□□□□□ -1.99
Chd4-201ENSMUST00000056889 Krtap9-1Q64526 186 aa2.63□□□□□ -1.99
Chd4-201ENSMUST00000056889 Gm11559Q9D3H7 191 aa2.63□□□□□ -1.99
Chd4-201ENSMUST00000056889 Gm11567Q9D141 195 aa2.51□□□□□ -2.01
Chd4-201ENSMUST00000056889 Gm11639A0A1D5RLM8 5808 aa2.27□□□□□ -2.05
Chd4-201ENSMUST00000056889 Krtap6-2O08884 159 aa2.22□□□□□ -2.05
Chd4-201ENSMUST00000056889 Gpr98Q8VHN7 6298 aaKnown RBP2.05□□□□□ -2.08
Chd4-201ENSMUST00000056889 Krtap5-2Q9D5Z7 189 aa2.05□□□□□ -2.08
Chd4-201ENSMUST00000056889 Krtap21-1Q925H4 128 aa2.03□□□□□ -2.08
Chd4-201ENSMUST00000056889 Krtap28-10A0A1Y7VP58 119 aa2.03□□□□□ -2.09
Chd4-201ENSMUST00000056889 A0A1Y7VLE6 161 aa2.02□□□□□ -2.09
Chd4-201ENSMUST00000056889 A0A1Y7VJ07 166 aa2.01□□□□□ -2.09
Chd4-201ENSMUST00000056889 Hmcn1D3YXG0 5634 aa2.01□□□□□ -2.09
Chd4-201ENSMUST00000056889 A030003K21RikA0A1Y7VIM3 128 aa1.99□□□□□ -2.09
Chd4-201ENSMUST00000056889 A030014E15RikA0A1Y7VJV2 120 aa1.96□□□□□ -2.1
Chd4-201ENSMUST00000056889 Gm4553A0A1B0GSA9 284 aa1.93□□□□□ -2.1
Chd4-201ENSMUST00000056889 Gm6217A0A1Y7VJK9 128 aa1.89□□□□□ -2.11
Chd4-201ENSMUST00000056889 A0A1Y7VJH8 109 aa1.88□□□□□ -2.11
Chd4-201ENSMUST00000056889 A030005L19RikA0A1Y7VIU2 113 aa1.87□□□□□ -2.11
Chd4-201ENSMUST00000056889 A030005K14RikA0A1Y7VNY1 122 aa1.86□□□□□ -2.11
Chd4-201ENSMUST00000056889 Gm2431E9Q8S1 172 aa1.83□□□□□ -2.12
Chd4-201ENSMUST00000056889 Gm45337A0A1B0GS71 263 aa1.82□□□□□ -2.12
Chd4-201ENSMUST00000056889 Gm10153A0A1B0GRL1 320 aa1.82□□□□□ -2.12
Chd4-201ENSMUST00000056889 Gm40460A0A1B0GR10 244 aa1.77□□□□□ -2.13
Chd4-201ENSMUST00000056889 Gm7579A0A1B0GRJ4 243 aa1.77□□□□□ -2.13
Chd4-201ENSMUST00000056889 Krtap5-5Q2TA51 241 aa1.77□□□□□ -2.13
Chd4-201ENSMUST00000056889 Krtap5-4Q62220 223 aa1.77□□□□□ -2.13
Chd4-201ENSMUST00000056889 Krtap28-13A0A087WQP5 138 aa1.77□□□□□ -2.13
Chd4-201ENSMUST00000056889 Gm7544A0A1Y7VJ58 118 aa1.76□□□□□ -2.13
Chd4-201ENSMUST00000056889 AhnakE9Q616 5656 aaKnown RBP1.74□□□□□ -2.13
Chd4-201ENSMUST00000056889 Gm39115A0A1B0GSH7 232 aa1.7□□□□□ -2.14
Chd4-201ENSMUST00000056889 A0A286YCP9 139 aa1.67□□□□□ -2.14
Chd4-201ENSMUST00000056889 Gm45618A0A1B0GSA0 219 aa1.52□□□□□ -2.17
Chd4-201ENSMUST00000056889 Gm29735A0A1B0GT06 219 aa1.33□□□□□ -2.2
Chd4-201ENSMUST00000056889 Krtap5-1Q64507 230 aa1.14□□□□□ -2.23
Chd4-201ENSMUST00000056889 Gm4559A4IF42 199 aa0.79□□□□□ -2.28
Retrieved 80 of 22,080 RNA–protein pairs in 304.7 ms