RNA–Protein interactions for RNA: ENSMUST00000049074.12

Ptprf-201, Transcript of Receptor-type tyrosine-protein phosphatase F, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ptprf, Length 7,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptprf-201ENSMUST00000049074 Fsip2A2ARZ3 6995 aa5.41□□□□□ -1.54
Ptprf-201ENSMUST00000049074 Krtap17-1A2A5X6 109 aa5.4□□□□□ -1.55
Ptprf-201ENSMUST00000049074 Lce1a2Q9D1K4 149 aa5.39□□□□□ -1.55
Ptprf-201ENSMUST00000049074 Lce1kJ3QP15 125 aa5.38□□□□□ -1.55
Ptprf-201ENSMUST00000049074 Birc6O88738 4882 aa5.35□□□□□ -1.55
Ptprf-201ENSMUST00000049074 Lce1a1Q9CQH5 143 aa5.33□□□□□ -1.56
Ptprf-201ENSMUST00000049074 Herc1E9PZP8 4859 aa5.31□□□□□ -1.56
Ptprf-201ENSMUST00000049074 Syne2Q6ZWQ0 6874 aaKnown RBP5.27□□□□□ -1.57
Ptprf-201ENSMUST00000049074 Sprr2dO70555 85 aa5.27□□□□□ -1.57
Ptprf-201ENSMUST00000049074 Gm11562A0PK51 136 aa5.26□□□□□ -1.57
Ptprf-201ENSMUST00000049074 Gm11554B1AQB2 190 aa5.15□□□□□ -1.59
Ptprf-201ENSMUST00000049074 Gm11938Q9D3H4 131 aa5.11□□□□□ -1.59
Ptprf-201ENSMUST00000049074 Sprr2bO70554 98 aa5.1□□□□□ -1.59
Ptprf-201ENSMUST00000049074 ZanO88799 5376 aa5.09□□□□□ -1.59
Ptprf-201ENSMUST00000049074 4932415D10RikA0A1W2P6U8 4986 aa5.08□□□□□ -1.6
Ptprf-201ENSMUST00000049074 Mt3P28184 68 aa5.06□□□□□ -1.6
Ptprf-201ENSMUST00000049074 Ubr4A2AN08 5180 aa5.02□□□□□ -1.61
Ptprf-201ENSMUST00000049074 Krtap6-3A0A087WQL6 57 aa5.01□□□□□ -1.61
Ptprf-201ENSMUST00000049074 Syne1Q6ZWR6 8799 aa5.01□□□□□ -1.61
Ptprf-201ENSMUST00000049074 Muc5bE9Q5I3 4800 aa4.99□□□□□ -1.61
Ptprf-201ENSMUST00000049074 Krtap31-1Q9D644 177 aa4.97□□□□□ -1.61
Ptprf-201ENSMUST00000049074 Abca13Q5SSE9 5034 aa4.95□□□□□ -1.62
Ptprf-201ENSMUST00000049074 Fat4Q2PZL6 4981 aa4.91□□□□□ -1.62
Ptprf-201ENSMUST00000049074 Hmcn2A2AJ76 5100 aa4.77□□□□□ -1.65
Ptprf-201ENSMUST00000049074 Krtap4-16Q91W93 202 aa4.72□□□□□ -1.65
Ptprf-201ENSMUST00000049074 Krtap20-2E9Q0A8 60 aa4.7□□□□□ -1.66
Ptprf-201ENSMUST00000049074 Ush2AQ2QI47 5193 aa4.54□□□□□ -1.68
Ptprf-201ENSMUST00000049074 Rnf213E9Q555 5152 aaKnown RBP4.52□□□□□ -1.69
Ptprf-201ENSMUST00000049074 Krtap31-2Q8CAY5 177 aa4.49□□□□□ -1.69
Ptprf-201ENSMUST00000049074 Mt1P02802 61 aaKnown RBP4.43□□□□□ -1.7
Ptprf-201ENSMUST00000049074 SspoQ8CG65 4998 aa4.31□□□□□ -1.72
Ptprf-201ENSMUST00000049074 Muc16A0A140LJ72 8478 aa4.29□□□□□ -1.72
Ptprf-201ENSMUST00000049074 Macf1Q9QXZ0 7354 aaKnown RBP4.21□□□□□ -1.74
Ptprf-201ENSMUST00000049074 NebE9Q1W3 7152 aa4.17□□□□□ -1.74
Ptprf-201ENSMUST00000049074 ObscnA2AAJ9 8891 aaKnown RBP4.12□□□□□ -1.75
Ptprf-201ENSMUST00000049074 DstQ91ZU6 7393 aaKnown RBP4.01□□□□□ -1.77
Ptprf-201ENSMUST00000049074 Gm11555B1AQ89 175 aa3.98□□□□□ -1.77
Ptprf-201ENSMUST00000049074 Eppk1Q8R0W0 6548 aa3.97□□□□□ -1.77
Ptprf-201ENSMUST00000049074 Muc19Q6PZE0 7524 aa3.85□□□□□ -1.79
Ptprf-201ENSMUST00000049074 Gm11559Q9D3H7 191 aa3.63□□□□□ -1.83
Ptprf-201ENSMUST00000049074 1110025L11RikO09048 78 aa3.62□□□□□ -1.83
Ptprf-201ENSMUST00000049074 Krtap6-5Q925H3 78 aa3.62□□□□□ -1.83
Ptprf-201ENSMUST00000049074 Kmt2dQ6PDK2 5588 aa3.55□□□□□ -1.84
Ptprf-201ENSMUST00000049074 Gm10229O08631 77 aa3.54□□□□□ -1.84
Ptprf-201ENSMUST00000049074 Gm11568A2A4M2 211 aa3.44□□□□□ -1.86
Ptprf-201ENSMUST00000049074 Krtap9-1Q64526 186 aa3.44□□□□□ -1.86
Ptprf-201ENSMUST00000049074 Phgr1Q8K0G7 91 aa3.33□□□□□ -1.88
Ptprf-201ENSMUST00000049074 Gpr98Q8VHN7 6298 aaKnown RBP2.89□□□□□ -1.95
Ptprf-201ENSMUST00000049074 Krtap6-2O08884 159 aa2.83□□□□□ -1.96
Ptprf-201ENSMUST00000049074 Krtap5-2Q9D5Z7 189 aa2.83□□□□□ -1.96
Ptprf-201ENSMUST00000049074 Gm11639A0A1D5RLM8 5808 aa2.82□□□□□ -1.96
Ptprf-201ENSMUST00000049074 Gm4553A0A1B0GSA9 284 aa2.69□□□□□ -1.98
Ptprf-201ENSMUST00000049074 Gm2431E9Q8S1 172 aa2.62□□□□□ -1.99
Ptprf-201ENSMUST00000049074 Hmcn1D3YXG0 5634 aa2.61□□□□□ -1.99
Ptprf-201ENSMUST00000049074 A030005L19RikA0A1Y7VIU2 113 aa2.51□□□□□ -2.01
Ptprf-201ENSMUST00000049074 Krtap21-1Q925H4 128 aa2.45□□□□□ -2.02
Ptprf-201ENSMUST00000049074 AhnakE9Q616 5656 aaKnown RBP2.32□□□□□ -2.04
Ptprf-201ENSMUST00000049074 Gm11567Q9D141 195 aa2.26□□□□□ -2.05
Ptprf-201ENSMUST00000049074 Gm10153A0A1B0GRL1 320 aa2.25□□□□□ -2.05
Ptprf-201ENSMUST00000049074 Gm45337A0A1B0GS71 263 aa2.13□□□□□ -2.07
Ptprf-201ENSMUST00000049074 Gm40460A0A1B0GR10 244 aa2.04□□□□□ -2.08
Ptprf-201ENSMUST00000049074 Gm7579A0A1B0GRJ4 243 aa2.04□□□□□ -2.08
Ptprf-201ENSMUST00000049074 Krtap5-5Q2TA51 241 aa2.04□□□□□ -2.08
Ptprf-201ENSMUST00000049074 Krtap5-4Q62220 223 aa2.04□□□□□ -2.08
Ptprf-201ENSMUST00000049074 Gm39115A0A1B0GSH7 232 aa2.03□□□□□ -2.09
Ptprf-201ENSMUST00000049074 A0A1Y7VJH8 109 aa1.72□□□□□ -2.13
Ptprf-201ENSMUST00000049074 Krtap5-1Q64507 230 aa1.7□□□□□ -2.14
Ptprf-201ENSMUST00000049074 Gm45618A0A1B0GSA0 219 aa1.65□□□□□ -2.14
Ptprf-201ENSMUST00000049074 Gm29735A0A1B0GT06 219 aa1.49□□□□□ -2.17
Ptprf-201ENSMUST00000049074 A0A1Y7VLE6 161 aa1.32□□□□□ -2.2
Ptprf-201ENSMUST00000049074 A0A1Y7VJ07 166 aa1.22□□□□□ -2.21
Ptprf-201ENSMUST00000049074 A0A286YCP9 139 aa1.07□□□□□ -2.24
Ptprf-201ENSMUST00000049074 A030003K21RikA0A1Y7VIM3 128 aa0.93□□□□□ -2.26
Ptprf-201ENSMUST00000049074 Gm4559A4IF42 199 aa0.87□□□□□ -2.27
Ptprf-201ENSMUST00000049074 Krtap28-10A0A1Y7VP58 119 aa0.8□□□□□ -2.28
Ptprf-201ENSMUST00000049074 Gm6217A0A1Y7VJK9 128 aa0.78□□□□□ -2.28
Ptprf-201ENSMUST00000049074 A030005K14RikA0A1Y7VNY1 122 aa0.75□□□□□ -2.29
Ptprf-201ENSMUST00000049074 Krtap28-13A0A087WQP5 138 aa0.75□□□□□ -2.29
Ptprf-201ENSMUST00000049074 A030014E15RikA0A1Y7VJV2 120 aa0.69□□□□□ -2.3
Ptprf-201ENSMUST00000049074 Gm7544A0A1Y7VJ58 118 aa0.62□□□□□ -2.31
Retrieved 80 of 22,080 RNA–protein pairs in 36.3 ms