RNA–Protein interactions for RNA: ENSMUST00000049074.12

Ptprf-201, Transcript of Receptor-type tyrosine-protein phosphatase F, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ptprf, Length 7,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptprf-201ENSMUST00000049074 Fsip2A2ARZ3 6995 aa5,41□□□□□ -1,54
Ptprf-201ENSMUST00000049074 Krtap17-1A2A5X6 109 aa5,4□□□□□ -1,55
Ptprf-201ENSMUST00000049074 Lce1a2Q9D1K4 149 aa5,39□□□□□ -1,55
Ptprf-201ENSMUST00000049074 Lce1kJ3QP15 125 aa5,38□□□□□ -1,55
Ptprf-201ENSMUST00000049074 Birc6O88738 4882 aa5,35□□□□□ -1,55
Ptprf-201ENSMUST00000049074 Lce1a1Q9CQH5 143 aa5,33□□□□□ -1,56
Ptprf-201ENSMUST00000049074 Herc1E9PZP8 4859 aa5,31□□□□□ -1,56
Ptprf-201ENSMUST00000049074 Syne2Q6ZWQ0 6874 aaKnown RBP5,27□□□□□ -1,57
Ptprf-201ENSMUST00000049074 Sprr2dO70555 85 aa5,27□□□□□ -1,57
Ptprf-201ENSMUST00000049074 Gm11562A0PK51 136 aa5,26□□□□□ -1,57
Ptprf-201ENSMUST00000049074 Gm11554B1AQB2 190 aa5,15□□□□□ -1,59
Ptprf-201ENSMUST00000049074 Gm11938Q9D3H4 131 aa5,11□□□□□ -1,59
Ptprf-201ENSMUST00000049074 Sprr2bO70554 98 aa5,1□□□□□ -1,59
Ptprf-201ENSMUST00000049074 ZanO88799 5376 aa5,09□□□□□ -1,59
Ptprf-201ENSMUST00000049074 4932415D10RikA0A1W2P6U8 4986 aa5,08□□□□□ -1,6
Ptprf-201ENSMUST00000049074 Mt3P28184 68 aa5,06□□□□□ -1,6
Ptprf-201ENSMUST00000049074 Ubr4A2AN08 5180 aa5,02□□□□□ -1,61
Ptprf-201ENSMUST00000049074 Krtap6-3A0A087WQL6 57 aa5,01□□□□□ -1,61
Ptprf-201ENSMUST00000049074 Syne1Q6ZWR6 8799 aa5,01□□□□□ -1,61
Ptprf-201ENSMUST00000049074 Muc5bE9Q5I3 4800 aa4,99□□□□□ -1,61
Ptprf-201ENSMUST00000049074 Krtap31-1Q9D644 177 aa4,97□□□□□ -1,61
Ptprf-201ENSMUST00000049074 Abca13Q5SSE9 5034 aa4,95□□□□□ -1,62
Ptprf-201ENSMUST00000049074 Fat4Q2PZL6 4981 aa4,91□□□□□ -1,62
Ptprf-201ENSMUST00000049074 Hmcn2A2AJ76 5100 aa4,77□□□□□ -1,65
Ptprf-201ENSMUST00000049074 Krtap4-16Q91W93 202 aa4,72□□□□□ -1,65
Ptprf-201ENSMUST00000049074 Krtap20-2E9Q0A8 60 aa4,7□□□□□ -1,66
Ptprf-201ENSMUST00000049074 Ush2AQ2QI47 5193 aa4,54□□□□□ -1,68
Ptprf-201ENSMUST00000049074 Rnf213E9Q555 5152 aaKnown RBP4,52□□□□□ -1,69
Ptprf-201ENSMUST00000049074 Krtap31-2Q8CAY5 177 aa4,49□□□□□ -1,69
Ptprf-201ENSMUST00000049074 Mt1P02802 61 aaKnown RBP4,43□□□□□ -1,7
Ptprf-201ENSMUST00000049074 SspoQ8CG65 4998 aa4,31□□□□□ -1,72
Ptprf-201ENSMUST00000049074 Muc16A0A140LJ72 8478 aa4,29□□□□□ -1,72
Ptprf-201ENSMUST00000049074 Macf1Q9QXZ0 7354 aaKnown RBP4,21□□□□□ -1,74
Ptprf-201ENSMUST00000049074 NebE9Q1W3 7152 aa4,17□□□□□ -1,74
Ptprf-201ENSMUST00000049074 ObscnA2AAJ9 8891 aaKnown RBP4,12□□□□□ -1,75
Ptprf-201ENSMUST00000049074 DstQ91ZU6 7393 aaKnown RBP4,01□□□□□ -1,77
Ptprf-201ENSMUST00000049074 Gm11555B1AQ89 175 aa3,98□□□□□ -1,77
Ptprf-201ENSMUST00000049074 Eppk1Q8R0W0 6548 aa3,97□□□□□ -1,77
Ptprf-201ENSMUST00000049074 Muc19Q6PZE0 7524 aa3,85□□□□□ -1,79
Ptprf-201ENSMUST00000049074 Gm11559Q9D3H7 191 aa3,63□□□□□ -1,83
Ptprf-201ENSMUST00000049074 1110025L11RikO09048 78 aa3,62□□□□□ -1,83
Ptprf-201ENSMUST00000049074 Krtap6-5Q925H3 78 aa3,62□□□□□ -1,83
Ptprf-201ENSMUST00000049074 Kmt2dQ6PDK2 5588 aa3,55□□□□□ -1,84
Ptprf-201ENSMUST00000049074 Gm10229O08631 77 aa3,54□□□□□ -1,84
Ptprf-201ENSMUST00000049074 Gm11568A2A4M2 211 aa3,44□□□□□ -1,86
Ptprf-201ENSMUST00000049074 Krtap9-1Q64526 186 aa3,44□□□□□ -1,86
Ptprf-201ENSMUST00000049074 Phgr1Q8K0G7 91 aa3,33□□□□□ -1,88
Ptprf-201ENSMUST00000049074 Gpr98Q8VHN7 6298 aaKnown RBP2,89□□□□□ -1,95
Ptprf-201ENSMUST00000049074 Krtap6-2O08884 159 aa2,83□□□□□ -1,96
Ptprf-201ENSMUST00000049074 Krtap5-2Q9D5Z7 189 aa2,83□□□□□ -1,96
Ptprf-201ENSMUST00000049074 Gm11639A0A1D5RLM8 5808 aa2,82□□□□□ -1,96
Ptprf-201ENSMUST00000049074 Gm4553A0A1B0GSA9 284 aa2,69□□□□□ -1,98
Ptprf-201ENSMUST00000049074 Gm2431E9Q8S1 172 aa2,62□□□□□ -1,99
Ptprf-201ENSMUST00000049074 Hmcn1D3YXG0 5634 aa2,61□□□□□ -1,99
Ptprf-201ENSMUST00000049074 A030005L19RikA0A1Y7VIU2 113 aa2,51□□□□□ -2,01
Ptprf-201ENSMUST00000049074 Krtap21-1Q925H4 128 aa2,45□□□□□ -2,02
Ptprf-201ENSMUST00000049074 AhnakE9Q616 5656 aaKnown RBP2,32□□□□□ -2,04
Ptprf-201ENSMUST00000049074 Gm11567Q9D141 195 aa2,26□□□□□ -2,05
Ptprf-201ENSMUST00000049074 Gm10153A0A1B0GRL1 320 aa2,25□□□□□ -2,05
Ptprf-201ENSMUST00000049074 Gm45337A0A1B0GS71 263 aa2,13□□□□□ -2,07
Ptprf-201ENSMUST00000049074 Gm40460A0A1B0GR10 244 aa2,04□□□□□ -2,08
Ptprf-201ENSMUST00000049074 Gm7579A0A1B0GRJ4 243 aa2,04□□□□□ -2,08
Ptprf-201ENSMUST00000049074 Krtap5-5Q2TA51 241 aa2,04□□□□□ -2,08
Ptprf-201ENSMUST00000049074 Krtap5-4Q62220 223 aa2,04□□□□□ -2,08
Ptprf-201ENSMUST00000049074 Gm39115A0A1B0GSH7 232 aa2,03□□□□□ -2,09
Ptprf-201ENSMUST00000049074 A0A1Y7VJH8 109 aa1,72□□□□□ -2,13
Ptprf-201ENSMUST00000049074 Krtap5-1Q64507 230 aa1,7□□□□□ -2,14
Ptprf-201ENSMUST00000049074 Gm45618A0A1B0GSA0 219 aa1,65□□□□□ -2,14
Ptprf-201ENSMUST00000049074 Gm29735A0A1B0GT06 219 aa1,49□□□□□ -2,17
Ptprf-201ENSMUST00000049074 A0A1Y7VLE6 161 aa1,32□□□□□ -2,2
Ptprf-201ENSMUST00000049074 A0A1Y7VJ07 166 aa1,22□□□□□ -2,21
Ptprf-201ENSMUST00000049074 A0A286YCP9 139 aa1,07□□□□□ -2,24
Ptprf-201ENSMUST00000049074 A030003K21RikA0A1Y7VIM3 128 aa0,93□□□□□ -2,26
Ptprf-201ENSMUST00000049074 Gm4559A4IF42 199 aa0,87□□□□□ -2,27
Ptprf-201ENSMUST00000049074 Krtap28-10A0A1Y7VP58 119 aa0,8□□□□□ -2,28
Ptprf-201ENSMUST00000049074 Gm6217A0A1Y7VJK9 128 aa0,78□□□□□ -2,28
Ptprf-201ENSMUST00000049074 A030005K14RikA0A1Y7VNY1 122 aa0,75□□□□□ -2,29
Ptprf-201ENSMUST00000049074 Krtap28-13A0A087WQP5 138 aa0,75□□□□□ -2,29
Ptprf-201ENSMUST00000049074 A030014E15RikA0A1Y7VJV2 120 aa0,69□□□□□ -2,3
Ptprf-201ENSMUST00000049074 Gm7544A0A1Y7VJ58 118 aa0,62□□□□□ -2,31
Retrieved 80 of 22,080 RNA–protein pairs in 9,4 ms