RNA–Protein interactions for RNA: ENSMUST00000047479.2

Pcdhac2-201, Transcript of Protocadherin alpha C2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac2, Length 5,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2-201ENSMUST00000047479 Krtap4-8B1AQA8 209 aa5.3□□□□□ -1.56
Pcdhac2-201ENSMUST00000047479 Krtap4-9B1AQA9 244 aa5.27□□□□□ -1.57
Pcdhac2-201ENSMUST00000047479 Krtap4-7Q9D732 168 aa5.27□□□□□ -1.57
Pcdhac2-201ENSMUST00000047479 Ubr4A2AN08 5180 aa5.24□□□□□ -1.57
Pcdhac2-201ENSMUST00000047479 Krtap17-1A2A5X6 109 aa5.23□□□□□ -1.57
Pcdhac2-201ENSMUST00000047479 Fat4Q2PZL6 4981 aa5.22□□□□□ -1.57
Pcdhac2-201ENSMUST00000047479 Gm11562A0PK51 136 aa5.22□□□□□ -1.57
Pcdhac2-201ENSMUST00000047479 ZanO88799 5376 aa5.17□□□□□ -1.58
Pcdhac2-201ENSMUST00000047479 Krtap4-13Q9D7P3 165 aa5.15□□□□□ -1.59
Pcdhac2-201ENSMUST00000047479 Sprr2hO70559 108 aa5.14□□□□□ -1.59
Pcdhac2-201ENSMUST00000047479 Gm11938Q9D3H4 131 aa5.12□□□□□ -1.59
Pcdhac2-201ENSMUST00000047479 Syne1Q6ZWR6 8799 aa5.12□□□□□ -1.59
Pcdhac2-201ENSMUST00000047479 Lce1kJ3QP15 125 aa5.12□□□□□ -1.59
Pcdhac2-201ENSMUST00000047479 Krtap31-1Q9D644 177 aa5.12□□□□□ -1.59
Pcdhac2-201ENSMUST00000047479 Muc5bE9Q5I3 4800 aa5.08□□□□□ -1.6
Pcdhac2-201ENSMUST00000047479 Ush2AQ2QI47 5193 aa5.06□□□□□ -1.6
Pcdhac2-201ENSMUST00000047479 Sprr2dO70555 85 aa5.02□□□□□ -1.61
Pcdhac2-201ENSMUST00000047479 Mt3P28184 68 aa5□□□□□ -1.61
Pcdhac2-201ENSMUST00000047479 Hmcn2A2AJ76 5100 aa4.97□□□□□ -1.61
Pcdhac2-201ENSMUST00000047479 Fsip2A2ARZ3 6995 aa4.93□□□□□ -1.62
Pcdhac2-201ENSMUST00000047479 Rnf213E9Q555 5152 aaKnown RBP4.92□□□□□ -1.62
Pcdhac2-201ENSMUST00000047479 Lce1a1Q9CQH5 143 aa4.84□□□□□ -1.63
Pcdhac2-201ENSMUST00000047479 Syne2Q6ZWQ0 6874 aaKnown RBP4.82□□□□□ -1.64
Pcdhac2-201ENSMUST00000047479 Krtap6-3A0A087WQL6 57 aa4.74□□□□□ -1.65
Pcdhac2-201ENSMUST00000047479 Krtap4-16Q91W93 202 aa4.69□□□□□ -1.66
Pcdhac2-201ENSMUST00000047479 Gm11554B1AQB2 190 aa4.67□□□□□ -1.66
Pcdhac2-201ENSMUST00000047479 Sprr2bO70554 98 aa4.62□□□□□ -1.67
Pcdhac2-201ENSMUST00000047479 SspoQ8CG65 4998 aa4.54□□□□□ -1.68
Pcdhac2-201ENSMUST00000047479 Krtap31-2Q8CAY5 177 aa4.52□□□□□ -1.69
Pcdhac2-201ENSMUST00000047479 Mt1P02802 61 aaKnown RBP4.49□□□□□ -1.69
Pcdhac2-201ENSMUST00000047479 Krtap20-2E9Q0A8 60 aa4.44□□□□□ -1.7
Pcdhac2-201ENSMUST00000047479 Muc16A0A140LJ72 8478 aa4.33□□□□□ -1.72
Pcdhac2-201ENSMUST00000047479 A0A1Y7VLE6 161 aa4.27□□□□□ -1.73
Pcdhac2-201ENSMUST00000047479 ObscnA2AAJ9 8891 aaKnown RBP4.21□□□□□ -1.74
Pcdhac2-201ENSMUST00000047479 Eppk1Q8R0W0 6548 aa4.11□□□□□ -1.75
Pcdhac2-201ENSMUST00000047479 Macf1Q9QXZ0 7354 aaKnown RBP4.11□□□□□ -1.75
Pcdhac2-201ENSMUST00000047479 NebE9Q1W3 7152 aa4.01□□□□□ -1.77
Pcdhac2-201ENSMUST00000047479 DstQ91ZU6 7393 aaKnown RBP3.93□□□□□ -1.78
Pcdhac2-201ENSMUST00000047479 Gm11555B1AQ89 175 aa3.9□□□□□ -1.78
Pcdhac2-201ENSMUST00000047479 Kmt2dQ6PDK2 5588 aa3.9□□□□□ -1.78
Pcdhac2-201ENSMUST00000047479 A030003K21RikA0A1Y7VIM3 128 aa3.88□□□□□ -1.79
Pcdhac2-201ENSMUST00000047479 1110025L11RikO09048 78 aa3.72□□□□□ -1.81
Pcdhac2-201ENSMUST00000047479 Krtap6-5Q925H3 78 aa3.72□□□□□ -1.81
Pcdhac2-201ENSMUST00000047479 Gm6217A0A1Y7VJK9 128 aa3.6□□□□□ -1.83
Pcdhac2-201ENSMUST00000047479 Muc19Q6PZE0 7524 aa3.6□□□□□ -1.83
Pcdhac2-201ENSMUST00000047479 Gm10229O08631 77 aa3.55□□□□□ -1.84
Pcdhac2-201ENSMUST00000047479 Gm11559Q9D3H7 191 aa3.52□□□□□ -1.85
Pcdhac2-201ENSMUST00000047479 Gm11568A2A4M2 211 aa3.41□□□□□ -1.86
Pcdhac2-201ENSMUST00000047479 Krtap9-1Q64526 186 aa3.41□□□□□ -1.86
Pcdhac2-201ENSMUST00000047479 Krtap28-10A0A1Y7VP58 119 aa3.39□□□□□ -1.87
Pcdhac2-201ENSMUST00000047479 Gm7544A0A1Y7VJ58 118 aa3.36□□□□□ -1.87
Pcdhac2-201ENSMUST00000047479 A0A1Y7VJH8 109 aa3.36□□□□□ -1.87
Pcdhac2-201ENSMUST00000047479 Phgr1Q8K0G7 91 aa3.31□□□□□ -1.88
Pcdhac2-201ENSMUST00000047479 A030005K14RikA0A1Y7VNY1 122 aa3.3□□□□□ -1.88
Pcdhac2-201ENSMUST00000047479 Gm11639A0A1D5RLM8 5808 aa3.25□□□□□ -1.89
Pcdhac2-201ENSMUST00000047479 A030005L19RikA0A1Y7VIU2 113 aa3.21□□□□□ -1.9
Pcdhac2-201ENSMUST00000047479 Krtap28-13A0A087WQP5 138 aa3.17□□□□□ -1.9
Pcdhac2-201ENSMUST00000047479 Gpr98Q8VHN7 6298 aaKnown RBP3.16□□□□□ -1.9
Pcdhac2-201ENSMUST00000047479 A0A1Y7VJ07 166 aa3.13□□□□□ -1.91
Pcdhac2-201ENSMUST00000047479 Krtap5-2Q9D5Z7 189 aa2.98□□□□□ -1.93
Pcdhac2-201ENSMUST00000047479 Hmcn1D3YXG0 5634 aa2.92□□□□□ -1.94
Pcdhac2-201ENSMUST00000047479 Krtap6-2O08884 159 aa2.85□□□□□ -1.95
Pcdhac2-201ENSMUST00000047479 Gm4553A0A1B0GSA9 284 aa2.81□□□□□ -1.96
Pcdhac2-201ENSMUST00000047479 A030014E15RikA0A1Y7VJV2 120 aa2.77□□□□□ -1.97
Pcdhac2-201ENSMUST00000047479 Gm2431E9Q8S1 172 aa2.71□□□□□ -1.98
Pcdhac2-201ENSMUST00000047479 Gm10153A0A1B0GRL1 320 aa2.59□□□□□ -1.99
Pcdhac2-201ENSMUST00000047479 AhnakE9Q616 5656 aaKnown RBP2.59□□□□□ -2
Pcdhac2-201ENSMUST00000047479 Krtap21-1Q925H4 128 aa2.58□□□□□ -2
Pcdhac2-201ENSMUST00000047479 Gm11567Q9D141 195 aa2.46□□□□□ -2.02
Pcdhac2-201ENSMUST00000047479 Gm45337A0A1B0GS71 263 aa2.43□□□□□ -2.02
Pcdhac2-201ENSMUST00000047479 Gm40460A0A1B0GR10 244 aa2.36□□□□□ -2.03
Pcdhac2-201ENSMUST00000047479 Gm7579A0A1B0GRJ4 243 aa2.36□□□□□ -2.03
Pcdhac2-201ENSMUST00000047479 Krtap5-5Q2TA51 241 aa2.36□□□□□ -2.03
Pcdhac2-201ENSMUST00000047479 Krtap5-4Q62220 223 aa2.36□□□□□ -2.03
Pcdhac2-201ENSMUST00000047479 A0A286YCP9 139 aa2.29□□□□□ -2.04
Pcdhac2-201ENSMUST00000047479 Gm39115A0A1B0GSH7 232 aa2.2□□□□□ -2.06
Pcdhac2-201ENSMUST00000047479 Gm45618A0A1B0GSA0 219 aa1.83□□□□□ -2.12
Pcdhac2-201ENSMUST00000047479 Gm29735A0A1B0GT06 219 aa1.76□□□□□ -2.13
Pcdhac2-201ENSMUST00000047479 Krtap5-1Q64507 230 aa1.53□□□□□ -2.16
Pcdhac2-201ENSMUST00000047479 Gm4559A4IF42 199 aa0.94□□□□□ -2.26
Retrieved 80 of 22,080 RNA–protein pairs in 71 ms