RNA–Protein interactions for RNA: ENSMUST00000047479.2

Pcdhac2-201, Transcript of Protocadherin alpha C2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac2, Length 5,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2-201ENSMUST00000047479 Krtap4-8B1AQA8 209 aa5,3□□□□□ -1,56
Pcdhac2-201ENSMUST00000047479 Krtap4-9B1AQA9 244 aa5,27□□□□□ -1,57
Pcdhac2-201ENSMUST00000047479 Krtap4-7Q9D732 168 aa5,27□□□□□ -1,57
Pcdhac2-201ENSMUST00000047479 Ubr4A2AN08 5180 aa5,24□□□□□ -1,57
Pcdhac2-201ENSMUST00000047479 Krtap17-1A2A5X6 109 aa5,23□□□□□ -1,57
Pcdhac2-201ENSMUST00000047479 Fat4Q2PZL6 4981 aa5,22□□□□□ -1,57
Pcdhac2-201ENSMUST00000047479 Gm11562A0PK51 136 aa5,22□□□□□ -1,57
Pcdhac2-201ENSMUST00000047479 ZanO88799 5376 aa5,17□□□□□ -1,58
Pcdhac2-201ENSMUST00000047479 Krtap4-13Q9D7P3 165 aa5,15□□□□□ -1,59
Pcdhac2-201ENSMUST00000047479 Sprr2hO70559 108 aa5,14□□□□□ -1,59
Pcdhac2-201ENSMUST00000047479 Gm11938Q9D3H4 131 aa5,12□□□□□ -1,59
Pcdhac2-201ENSMUST00000047479 Syne1Q6ZWR6 8799 aa5,12□□□□□ -1,59
Pcdhac2-201ENSMUST00000047479 Lce1kJ3QP15 125 aa5,12□□□□□ -1,59
Pcdhac2-201ENSMUST00000047479 Krtap31-1Q9D644 177 aa5,12□□□□□ -1,59
Pcdhac2-201ENSMUST00000047479 Muc5bE9Q5I3 4800 aa5,08□□□□□ -1,6
Pcdhac2-201ENSMUST00000047479 Ush2AQ2QI47 5193 aa5,06□□□□□ -1,6
Pcdhac2-201ENSMUST00000047479 Sprr2dO70555 85 aa5,02□□□□□ -1,61
Pcdhac2-201ENSMUST00000047479 Mt3P28184 68 aa5□□□□□ -1,61
Pcdhac2-201ENSMUST00000047479 Hmcn2A2AJ76 5100 aa4,97□□□□□ -1,61
Pcdhac2-201ENSMUST00000047479 Fsip2A2ARZ3 6995 aa4,93□□□□□ -1,62
Pcdhac2-201ENSMUST00000047479 Rnf213E9Q555 5152 aaKnown RBP4,92□□□□□ -1,62
Pcdhac2-201ENSMUST00000047479 Lce1a1Q9CQH5 143 aa4,84□□□□□ -1,63
Pcdhac2-201ENSMUST00000047479 Syne2Q6ZWQ0 6874 aaKnown RBP4,82□□□□□ -1,64
Pcdhac2-201ENSMUST00000047479 Krtap6-3A0A087WQL6 57 aa4,74□□□□□ -1,65
Pcdhac2-201ENSMUST00000047479 Krtap4-16Q91W93 202 aa4,69□□□□□ -1,66
Pcdhac2-201ENSMUST00000047479 Gm11554B1AQB2 190 aa4,67□□□□□ -1,66
Pcdhac2-201ENSMUST00000047479 Sprr2bO70554 98 aa4,62□□□□□ -1,67
Pcdhac2-201ENSMUST00000047479 SspoQ8CG65 4998 aa4,54□□□□□ -1,68
Pcdhac2-201ENSMUST00000047479 Krtap31-2Q8CAY5 177 aa4,52□□□□□ -1,69
Pcdhac2-201ENSMUST00000047479 Mt1P02802 61 aaKnown RBP4,49□□□□□ -1,69
Pcdhac2-201ENSMUST00000047479 Krtap20-2E9Q0A8 60 aa4,44□□□□□ -1,7
Pcdhac2-201ENSMUST00000047479 Muc16A0A140LJ72 8478 aa4,33□□□□□ -1,72
Pcdhac2-201ENSMUST00000047479 A0A1Y7VLE6 161 aa4,27□□□□□ -1,73
Pcdhac2-201ENSMUST00000047479 ObscnA2AAJ9 8891 aaKnown RBP4,21□□□□□ -1,74
Pcdhac2-201ENSMUST00000047479 Eppk1Q8R0W0 6548 aa4,11□□□□□ -1,75
Pcdhac2-201ENSMUST00000047479 Macf1Q9QXZ0 7354 aaKnown RBP4,11□□□□□ -1,75
Pcdhac2-201ENSMUST00000047479 NebE9Q1W3 7152 aa4,01□□□□□ -1,77
Pcdhac2-201ENSMUST00000047479 DstQ91ZU6 7393 aaKnown RBP3,93□□□□□ -1,78
Pcdhac2-201ENSMUST00000047479 Gm11555B1AQ89 175 aa3,9□□□□□ -1,78
Pcdhac2-201ENSMUST00000047479 Kmt2dQ6PDK2 5588 aa3,9□□□□□ -1,78
Pcdhac2-201ENSMUST00000047479 A030003K21RikA0A1Y7VIM3 128 aa3,88□□□□□ -1,79
Pcdhac2-201ENSMUST00000047479 1110025L11RikO09048 78 aa3,72□□□□□ -1,81
Pcdhac2-201ENSMUST00000047479 Krtap6-5Q925H3 78 aa3,72□□□□□ -1,81
Pcdhac2-201ENSMUST00000047479 Gm6217A0A1Y7VJK9 128 aa3,6□□□□□ -1,83
Pcdhac2-201ENSMUST00000047479 Muc19Q6PZE0 7524 aa3,6□□□□□ -1,83
Pcdhac2-201ENSMUST00000047479 Gm10229O08631 77 aa3,55□□□□□ -1,84
Pcdhac2-201ENSMUST00000047479 Gm11559Q9D3H7 191 aa3,52□□□□□ -1,85
Pcdhac2-201ENSMUST00000047479 Gm11568A2A4M2 211 aa3,41□□□□□ -1,86
Pcdhac2-201ENSMUST00000047479 Krtap9-1Q64526 186 aa3,41□□□□□ -1,86
Pcdhac2-201ENSMUST00000047479 Krtap28-10A0A1Y7VP58 119 aa3,39□□□□□ -1,87
Pcdhac2-201ENSMUST00000047479 Gm7544A0A1Y7VJ58 118 aa3,36□□□□□ -1,87
Pcdhac2-201ENSMUST00000047479 A0A1Y7VJH8 109 aa3,36□□□□□ -1,87
Pcdhac2-201ENSMUST00000047479 Phgr1Q8K0G7 91 aa3,31□□□□□ -1,88
Pcdhac2-201ENSMUST00000047479 A030005K14RikA0A1Y7VNY1 122 aa3,3□□□□□ -1,88
Pcdhac2-201ENSMUST00000047479 Gm11639A0A1D5RLM8 5808 aa3,25□□□□□ -1,89
Pcdhac2-201ENSMUST00000047479 A030005L19RikA0A1Y7VIU2 113 aa3,21□□□□□ -1,9
Pcdhac2-201ENSMUST00000047479 Krtap28-13A0A087WQP5 138 aa3,17□□□□□ -1,9
Pcdhac2-201ENSMUST00000047479 Gpr98Q8VHN7 6298 aaKnown RBP3,16□□□□□ -1,9
Pcdhac2-201ENSMUST00000047479 A0A1Y7VJ07 166 aa3,13□□□□□ -1,91
Pcdhac2-201ENSMUST00000047479 Krtap5-2Q9D5Z7 189 aa2,98□□□□□ -1,93
Pcdhac2-201ENSMUST00000047479 Hmcn1D3YXG0 5634 aa2,92□□□□□ -1,94
Pcdhac2-201ENSMUST00000047479 Krtap6-2O08884 159 aa2,85□□□□□ -1,95
Pcdhac2-201ENSMUST00000047479 Gm4553A0A1B0GSA9 284 aa2,81□□□□□ -1,96
Pcdhac2-201ENSMUST00000047479 A030014E15RikA0A1Y7VJV2 120 aa2,77□□□□□ -1,97
Pcdhac2-201ENSMUST00000047479 Gm2431E9Q8S1 172 aa2,71□□□□□ -1,98
Pcdhac2-201ENSMUST00000047479 Gm10153A0A1B0GRL1 320 aa2,59□□□□□ -1,99
Pcdhac2-201ENSMUST00000047479 AhnakE9Q616 5656 aaKnown RBP2,59□□□□□ -2
Pcdhac2-201ENSMUST00000047479 Krtap21-1Q925H4 128 aa2,58□□□□□ -2
Pcdhac2-201ENSMUST00000047479 Gm11567Q9D141 195 aa2,46□□□□□ -2,02
Pcdhac2-201ENSMUST00000047479 Gm45337A0A1B0GS71 263 aa2,43□□□□□ -2,02
Pcdhac2-201ENSMUST00000047479 Gm40460A0A1B0GR10 244 aa2,36□□□□□ -2,03
Pcdhac2-201ENSMUST00000047479 Gm7579A0A1B0GRJ4 243 aa2,36□□□□□ -2,03
Pcdhac2-201ENSMUST00000047479 Krtap5-5Q2TA51 241 aa2,36□□□□□ -2,03
Pcdhac2-201ENSMUST00000047479 Krtap5-4Q62220 223 aa2,36□□□□□ -2,03
Pcdhac2-201ENSMUST00000047479 A0A286YCP9 139 aa2,29□□□□□ -2,04
Pcdhac2-201ENSMUST00000047479 Gm39115A0A1B0GSH7 232 aa2,2□□□□□ -2,06
Pcdhac2-201ENSMUST00000047479 Gm45618A0A1B0GSA0 219 aa1,83□□□□□ -2,12
Pcdhac2-201ENSMUST00000047479 Gm29735A0A1B0GT06 219 aa1,76□□□□□ -2,13
Pcdhac2-201ENSMUST00000047479 Krtap5-1Q64507 230 aa1,53□□□□□ -2,16
Pcdhac2-201ENSMUST00000047479 Gm4559A4IF42 199 aa0,94□□□□□ -2,26
Retrieved 80 of 22,080 RNA–protein pairs in 29,2 ms