RNA–Protein interactions for RNA: ENSMUST00000031668.9

Col1a2-201, Transcript of Collagen alpha-2(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a2, Length 5,348 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2-201ENSMUST00000031668 Gm11564A2A4L9 201 aa4.48□□□□□ -1.69
Col1a2-201ENSMUST00000031668 Gm11563B1AQ90 168 aa4.48□□□□□ -1.69
Col1a2-201ENSMUST00000031668 Gm11595B1AQA7 289 aa4.48□□□□□ -1.69
Col1a2-201ENSMUST00000031668 Krtap4-8B1AQA8 209 aa4.48□□□□□ -1.69
Col1a2-201ENSMUST00000031668 Lce1a2Q9D1K4 149 aa4.46□□□□□ -1.7
Col1a2-201ENSMUST00000031668 A030005K14RikA0A1Y7VNY1 122 aa4.45□□□□□ -1.7
Col1a2-201ENSMUST00000031668 Rnf213E9Q555 5152 aaKnown RBP4.44□□□□□ -1.7
Col1a2-201ENSMUST00000031668 Krtap4-9B1AQA9 244 aa4.44□□□□□ -1.7
Col1a2-201ENSMUST00000031668 Muc5bE9Q5I3 4800 aa4.43□□□□□ -1.7
Col1a2-201ENSMUST00000031668 Ubr4A2AN08 5180 aa4.43□□□□□ -1.7
Col1a2-201ENSMUST00000031668 ZanO88799 5376 aa4.42□□□□□ -1.7
Col1a2-201ENSMUST00000031668 Gm10024A0A0A0MQA4 119 aa4.38□□□□□ -1.71
Col1a2-201ENSMUST00000031668 Gm11562A0PK51 136 aa4.38□□□□□ -1.71
Col1a2-201ENSMUST00000031668 Krtap28-13A0A087WQP5 138 aa4.37□□□□□ -1.71
Col1a2-201ENSMUST00000031668 2300003K06RikA2A4M0 262 aa4.36□□□□□ -1.71
Col1a2-201ENSMUST00000031668 A030014E15RikA0A1Y7VJV2 120 aa4.35□□□□□ -1.71
Col1a2-201ENSMUST00000031668 Krtap4-7Q9D732 168 aa4.34□□□□□ -1.71
Col1a2-201ENSMUST00000031668 Syne2Q6ZWQ0 6874 aaKnown RBP4.31□□□□□ -1.72
Col1a2-201ENSMUST00000031668 Krtap17-1A2A5X6 109 aa4.3□□□□□ -1.72
Col1a2-201ENSMUST00000031668 Krtap4-13Q9D7P3 165 aa4.3□□□□□ -1.72
Col1a2-201ENSMUST00000031668 Sprr2dO70555 85 aa4.27□□□□□ -1.73
Col1a2-201ENSMUST00000031668 Gm7544A0A1Y7VJ58 118 aa4.26□□□□□ -1.73
Col1a2-201ENSMUST00000031668 Syne1Q6ZWR6 8799 aa4.25□□□□□ -1.73
Col1a2-201ENSMUST00000031668 Ush2AQ2QI47 5193 aa4.25□□□□□ -1.73
Col1a2-201ENSMUST00000031668 Fsip2A2ARZ3 6995 aa4.24□□□□□ -1.73
Col1a2-201ENSMUST00000031668 Hmcn2A2AJ76 5100 aa4.23□□□□□ -1.73
Col1a2-201ENSMUST00000031668 A0A1Y7VJH8 109 aa4.18□□□□□ -1.74
Col1a2-201ENSMUST00000031668 Krtap6-3A0A087WQL6 57 aa4.15□□□□□ -1.74
Col1a2-201ENSMUST00000031668 Gm11938Q9D3H4 131 aa4.15□□□□□ -1.75
Col1a2-201ENSMUST00000031668 Sprr2hO70559 108 aa4.13□□□□□ -1.75
Col1a2-201ENSMUST00000031668 Lce1a1Q9CQH5 143 aa4.08□□□□□ -1.76
Col1a2-201ENSMUST00000031668 Lce1kJ3QP15 125 aa4.07□□□□□ -1.76
Col1a2-201ENSMUST00000031668 Krtap31-1Q9D644 177 aa4.05□□□□□ -1.76
Col1a2-201ENSMUST00000031668 Eppk1Q8R0W0 6548 aa3.98□□□□□ -1.77
Col1a2-201ENSMUST00000031668 SspoQ8CG65 4998 aa3.96□□□□□ -1.78
Col1a2-201ENSMUST00000031668 Mt3P28184 68 aa3.91□□□□□ -1.78
Col1a2-201ENSMUST00000031668 Gm11554B1AQB2 190 aa3.85□□□□□ -1.79
Col1a2-201ENSMUST00000031668 A0A286YCP9 139 aa3.81□□□□□ -1.8
Col1a2-201ENSMUST00000031668 A030005L19RikA0A1Y7VIU2 113 aa3.77□□□□□ -1.81
Col1a2-201ENSMUST00000031668 Macf1Q9QXZ0 7354 aaKnown RBP3.7□□□□□ -1.82
Col1a2-201ENSMUST00000031668 Krtap20-2E9Q0A8 60 aa3.69□□□□□ -1.82
Col1a2-201ENSMUST00000031668 Krtap4-16Q91W93 202 aa3.67□□□□□ -1.82
Col1a2-201ENSMUST00000031668 Gm11555B1AQ89 175 aa3.61□□□□□ -1.83
Col1a2-201ENSMUST00000031668 Mt1P02802 61 aaKnown RBP3.61□□□□□ -1.83
Col1a2-201ENSMUST00000031668 DstQ91ZU6 7393 aaKnown RBP3.59□□□□□ -1.83
Col1a2-201ENSMUST00000031668 Muc16A0A140LJ72 8478 aa3.59□□□□□ -1.84
Col1a2-201ENSMUST00000031668 Sprr2bO70554 98 aa3.52□□□□□ -1.85
Col1a2-201ENSMUST00000031668 ObscnA2AAJ9 8891 aaKnown RBP3.51□□□□□ -1.85
Col1a2-201ENSMUST00000031668 NebE9Q1W3 7152 aa3.5□□□□□ -1.85
Col1a2-201ENSMUST00000031668 Kmt2dQ6PDK2 5588 aa3.45□□□□□ -1.86
Col1a2-201ENSMUST00000031668 Gpr98Q8VHN7 6298 aaKnown RBP3.3□□□□□ -1.88
Col1a2-201ENSMUST00000031668 Krtap31-2Q8CAY5 177 aa3.24□□□□□ -1.89
Col1a2-201ENSMUST00000031668 Gm11639A0A1D5RLM8 5808 aa3.09□□□□□ -1.91
Col1a2-201ENSMUST00000031668 Gm11559Q9D3H7 191 aa3.09□□□□□ -1.91
Col1a2-201ENSMUST00000031668 Muc19Q6PZE0 7524 aa2.99□□□□□ -1.93
Col1a2-201ENSMUST00000031668 1110025L11RikO09048 78 aa2.94□□□□□ -1.94
Col1a2-201ENSMUST00000031668 Krtap6-5Q925H3 78 aa2.94□□□□□ -1.94
Col1a2-201ENSMUST00000031668 Gm11568A2A4M2 211 aa2.86□□□□□ -1.95
Col1a2-201ENSMUST00000031668 Krtap9-1Q64526 186 aa2.86□□□□□ -1.95
Col1a2-201ENSMUST00000031668 Hmcn1D3YXG0 5634 aa2.78□□□□□ -1.96
Col1a2-201ENSMUST00000031668 Gm10229O08631 77 aa2.74□□□□□ -1.97
Col1a2-201ENSMUST00000031668 Krtap5-2Q9D5Z7 189 aa2.7□□□□□ -1.98
Col1a2-201ENSMUST00000031668 Gm4553A0A1B0GSA9 284 aa2.61□□□□□ -1.99
Col1a2-201ENSMUST00000031668 Phgr1Q8K0G7 91 aa2.56□□□□□ -2
Col1a2-201ENSMUST00000031668 AhnakE9Q616 5656 aaKnown RBP2.48□□□□□ -2.01
Col1a2-201ENSMUST00000031668 Gm2431E9Q8S1 172 aa2.42□□□□□ -2.02
Col1a2-201ENSMUST00000031668 Gm10153A0A1B0GRL1 320 aa2.28□□□□□ -2.04
Col1a2-201ENSMUST00000031668 Krtap6-2O08884 159 aa2.24□□□□□ -2.05
Col1a2-201ENSMUST00000031668 Gm45337A0A1B0GS71 263 aa2.21□□□□□ -2.05
Col1a2-201ENSMUST00000031668 Gm40460A0A1B0GR10 244 aa2.19□□□□□ -2.06
Col1a2-201ENSMUST00000031668 Gm7579A0A1B0GRJ4 243 aa2.19□□□□□ -2.06
Col1a2-201ENSMUST00000031668 Krtap5-5Q2TA51 241 aa2.19□□□□□ -2.06
Col1a2-201ENSMUST00000031668 Krtap5-4Q62220 223 aa2.19□□□□□ -2.06
Col1a2-201ENSMUST00000031668 Krtap21-1Q925H4 128 aa2.14□□□□□ -2.07
Col1a2-201ENSMUST00000031668 Gm39115A0A1B0GSH7 232 aa2.1□□□□□ -2.07
Col1a2-201ENSMUST00000031668 Gm45618A0A1B0GSA0 219 aa1.89□□□□□ -2.11
Col1a2-201ENSMUST00000031668 Gm11567Q9D141 195 aa1.89□□□□□ -2.11
Col1a2-201ENSMUST00000031668 Krtap5-1Q64507 230 aa1.71□□□□□ -2.14
Col1a2-201ENSMUST00000031668 Gm29735A0A1B0GT06 219 aa1.63□□□□□ -2.15
Col1a2-201ENSMUST00000031668 Gm4559A4IF42 199 aa1.55□□□□□ -2.16
Retrieved 80 of 22,080 RNA–protein pairs in 109.5 ms