RNA–Protein interactions for RNA: ENSMUST00000025262.5

Ltb-201, Transcript of Lymphotoxin-beta, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ltb, Length 1,160 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ltb-201ENSMUST00000025262 SvipQ3UZP4 77 aa7,27□□□□□ -1,25
Ltb-201ENSMUST00000025262 Gm11568A2A4M2 211 aa7,23□□□□□ -1,25
Ltb-201ENSMUST00000025262 Gm3646F6S692 53 aa7,23□□□□□ -1,25
Ltb-201ENSMUST00000025262 Krtap9-1Q64526 186 aa7,23□□□□□ -1,25
Ltb-201ENSMUST00000025262 Gm2431E9Q8S1 172 aa7,21□□□□□ -1,26
Ltb-201ENSMUST00000025262 Ndufs5Q99LY9 106 aa7,2□□□□□ -1,26
Ltb-201ENSMUST00000025262 Gm17402F6Z0L5 76 aa7,15□□□□□ -1,26
Ltb-201ENSMUST00000025262 Gm3880A0A1B0GSB3 72 aa7,07□□□□□ -1,28
Ltb-201ENSMUST00000025262 Gm21887J3QQ04 176 aa7,06□□□□□ -1,28
Ltb-201ENSMUST00000025262 Krtap19-9bQ99NG9 58 aa7,06□□□□□ -1,28
Ltb-201ENSMUST00000025262 Gm45337A0A1B0GS71 263 aa6,97□□□□□ -1,29
Ltb-201ENSMUST00000025262 Syne1Q6ZWR6 8799 aa6,95□□□□□ -1,3
Ltb-201ENSMUST00000025262 Lce3bQ9CQM7 98 aa6,86□□□□□ -1,31
Ltb-201ENSMUST00000025262 Gm12216A0A1W2P827 62 aa6,83□□□□□ -1,32
Ltb-201ENSMUST00000025262 Hmcn1D3YXG0 5634 aa6,81□□□□□ -1,32
Ltb-201ENSMUST00000025262 Lce1fB9EJP6 147 aa6,76□□□□□ -1,33
Ltb-201ENSMUST00000025262 Romo1P60603 79 aa6,76□□□□□ -1,33
Ltb-201ENSMUST00000025262 Lce1cQ9D1C5 147 aa6,76□□□□□ -1,33
Ltb-201ENSMUST00000025262 NebE9Q1W3 7152 aa6,75□□□□□ -1,33
Ltb-201ENSMUST00000025262 Gm39115A0A1B0GSH7 232 aa6,75□□□□□ -1,33
Ltb-201ENSMUST00000025262 DstQ91ZU6 7393 aaKnown RBP6,7□□□□□ -1,34
Ltb-201ENSMUST00000025262 Gm40460A0A1B0GR10 244 aa6,69□□□□□ -1,34
Ltb-201ENSMUST00000025262 Gm7579A0A1B0GRJ4 243 aa6,69□□□□□ -1,34
Ltb-201ENSMUST00000025262 Krtap5-5Q2TA51 241 aa6,69□□□□□ -1,34
Ltb-201ENSMUST00000025262 Krtap5-4Q62220 223 aa6,69□□□□□ -1,34
Ltb-201ENSMUST00000025262 Gm10153A0A1B0GRL1 320 aa6,65□□□□□ -1,34
Ltb-201ENSMUST00000025262 Krtap4-16Q91W93 202 aa6,65□□□□□ -1,34
Ltb-201ENSMUST00000025262 Krtap19-4Q925H7 84 aa6,61□□□□□ -1,35
Ltb-201ENSMUST00000025262 Camk2n1Q6QWF9 78 aa6,58□□□□□ -1,36
Ltb-201ENSMUST00000025262 Gm10272F7CZ33 110 aa6,56□□□□□ -1,36
Ltb-201ENSMUST00000025262 Gm45618A0A1B0GSA0 219 aa6,45□□□□□ -1,38
Ltb-201ENSMUST00000025262 Gm11938Q9D3H4 131 aa6,37□□□□□ -1,39
Ltb-201ENSMUST00000025262 Mt1P02802 61 aaKnown RBP6,35□□□□□ -1,39
Ltb-201ENSMUST00000025262 Sprr2fO70557 76 aa6,32□□□□□ -1,4
Ltb-201ENSMUST00000025262 Krtap7-1Q9D3I6 87 aa6,3□□□□□ -1,4
Ltb-201ENSMUST00000025262 AhnakE9Q616 5656 aaKnown RBP6,26□□□□□ -1,41
Ltb-201ENSMUST00000025262 Gm40193A0A1B0GT39 78 aa6,14□□□□□ -1,43
Ltb-201ENSMUST00000025262 Tnp1P10856 55 aa5,95□□□□□ -1,46
Ltb-201ENSMUST00000025262 Mt3P28184 68 aa5,95□□□□□ -1,46
Ltb-201ENSMUST00000025262 Mp68P56379 58 aa5,93□□□□□ -1,46
Ltb-201ENSMUST00000025262 Lce3cQ91V05 98 aa5,92□□□□□ -1,46
Ltb-201ENSMUST00000025262 Lce3dE9Q8V1 98 aa5,82□□□□□ -1,48
Ltb-201ENSMUST00000025262 A0A1Y7VLE6 161 aa5,64□□□□□ -1,51
Ltb-201ENSMUST00000025262 ObscnA2AAJ9 8891 aaKnown RBP5,62□□□□□ -1,51
Ltb-201ENSMUST00000025262 Gm10100J3QK64 120 aa5,57□□□□□ -1,52
Ltb-201ENSMUST00000025262 Lce3eF8VQJ0 98 aa5,52□□□□□ -1,53
Ltb-201ENSMUST00000025262 Lce3fQ6PAI4 98 aa5,52□□□□□ -1,53
Ltb-201ENSMUST00000025262 4933428G20RikQ9D3X4 101 aa5,3□□□□□ -1,56
Ltb-201ENSMUST00000025262 Lce3aQ497I5 98 aa5,28□□□□□ -1,56
Ltb-201ENSMUST00000025262 Gm20538F6Z9R1 75 aa5,23□□□□□ -1,57
Ltb-201ENSMUST00000025262 Sprr2eO70556 76 aa5,2□□□□□ -1,58
Ltb-201ENSMUST00000025262 Ndufaf8A2AMZ4 74 aa5,09□□□□□ -1,59
Ltb-201ENSMUST00000025262 Sprr2dO70555 85 aa5,06□□□□□ -1,6
Ltb-201ENSMUST00000025262 Sprr2hO70559 108 aa5,06□□□□□ -1,6
Ltb-201ENSMUST00000025262 Gm10024A0A0A0MQA4 119 aa4,97□□□□□ -1,61
Ltb-201ENSMUST00000025262 A0A1Y7VJ07 166 aa4,94□□□□□ -1,62
Ltb-201ENSMUST00000025262 Muc16A0A140LJ72 8478 aa4,89□□□□□ -1,63
Ltb-201ENSMUST00000025262 Gm29735A0A1B0GT06 219 aa4,86□□□□□ -1,63
Ltb-201ENSMUST00000025262 Gm10142J3KMP7 120 aa4,56□□□□□ -1,68
Ltb-201ENSMUST00000025262 Gm11567Q9D141 195 aa4,56□□□□□ -1,68
Ltb-201ENSMUST00000025262 1110025L11RikO09048 78 aa4,38□□□□□ -1,71
Ltb-201ENSMUST00000025262 Krtap6-5Q925H3 78 aa4,38□□□□□ -1,71
Ltb-201ENSMUST00000025262 A030003K21RikA0A1Y7VIM3 128 aa4,35□□□□□ -1,71
Ltb-201ENSMUST00000025262 Gm9112A2AI92 75 aa4,27□□□□□ -1,73
Ltb-201ENSMUST00000025262 Krtap28-10A0A1Y7VP58 119 aa4,2□□□□□ -1,74
Ltb-201ENSMUST00000025262 Krtap5-1Q64507 230 aa4,1□□□□□ -1,75
Ltb-201ENSMUST00000025262 Gm10229O08631 77 aa3,96□□□□□ -1,78
Ltb-201ENSMUST00000025262 Sprr2bO70554 98 aa3,91□□□□□ -1,78
Ltb-201ENSMUST00000025262 Krtap31-2Q8CAY5 177 aa3,85□□□□□ -1,79
Ltb-201ENSMUST00000025262 Krtap31-1Q9D644 177 aa3,85□□□□□ -1,79
Ltb-201ENSMUST00000025262 Krtap6-2O08884 159 aa3,65□□□□□ -1,83
Ltb-201ENSMUST00000025262 Krtap21-1Q925H4 128 aa3,51□□□□□ -1,85
Ltb-201ENSMUST00000025262 A0A286YCP9 139 aa3,35□□□□□ -1,87
Ltb-201ENSMUST00000025262 Gm6217A0A1Y7VJK9 128 aa3,29□□□□□ -1,88
Ltb-201ENSMUST00000025262 Phgr1Q8K0G7 91 aa2,86□□□□□ -1,95
Ltb-201ENSMUST00000025262 Gm4559A4IF42 199 aa2,85□□□□□ -1,95
Ltb-201ENSMUST00000025262 A030005K14RikA0A1Y7VNY1 122 aa2,67□□□□□ -1,98
Ltb-201ENSMUST00000025262 A030014E15RikA0A1Y7VJV2 120 aa2,37□□□□□ -2,03
Ltb-201ENSMUST00000025262 Krtap28-13A0A087WQP5 138 aa2,07□□□□□ -2,08
Ltb-201ENSMUST00000025262 Gm7544A0A1Y7VJ58 118 aa2,02□□□□□ -2,09
Retrieved 80 of 22,080 RNA–protein pairs in 68,5 ms