RNA–Protein interactions for RNA: ENSMUST00000025262.5

Ltb-201, Transcript of Lymphotoxin-beta, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ltb, Length 1,160 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ltb-201ENSMUST00000025262 SvipQ3UZP4 77 aa7.27□□□□□ -1.25
Ltb-201ENSMUST00000025262 Gm11568A2A4M2 211 aa7.23□□□□□ -1.25
Ltb-201ENSMUST00000025262 Gm3646F6S692 53 aa7.23□□□□□ -1.25
Ltb-201ENSMUST00000025262 Krtap9-1Q64526 186 aa7.23□□□□□ -1.25
Ltb-201ENSMUST00000025262 Gm2431E9Q8S1 172 aa7.21□□□□□ -1.26
Ltb-201ENSMUST00000025262 Ndufs5Q99LY9 106 aa7.2□□□□□ -1.26
Ltb-201ENSMUST00000025262 Gm17402F6Z0L5 76 aa7.15□□□□□ -1.26
Ltb-201ENSMUST00000025262 Gm3880A0A1B0GSB3 72 aa7.07□□□□□ -1.28
Ltb-201ENSMUST00000025262 Gm21887J3QQ04 176 aa7.06□□□□□ -1.28
Ltb-201ENSMUST00000025262 Krtap19-9bQ99NG9 58 aa7.06□□□□□ -1.28
Ltb-201ENSMUST00000025262 Gm45337A0A1B0GS71 263 aa6.97□□□□□ -1.29
Ltb-201ENSMUST00000025262 Syne1Q6ZWR6 8799 aa6.95□□□□□ -1.3
Ltb-201ENSMUST00000025262 Lce3bQ9CQM7 98 aa6.86□□□□□ -1.31
Ltb-201ENSMUST00000025262 Gm12216A0A1W2P827 62 aa6.83□□□□□ -1.32
Ltb-201ENSMUST00000025262 Hmcn1D3YXG0 5634 aa6.81□□□□□ -1.32
Ltb-201ENSMUST00000025262 Lce1fB9EJP6 147 aa6.76□□□□□ -1.33
Ltb-201ENSMUST00000025262 Romo1P60603 79 aa6.76□□□□□ -1.33
Ltb-201ENSMUST00000025262 Lce1cQ9D1C5 147 aa6.76□□□□□ -1.33
Ltb-201ENSMUST00000025262 NebE9Q1W3 7152 aa6.75□□□□□ -1.33
Ltb-201ENSMUST00000025262 Gm39115A0A1B0GSH7 232 aa6.75□□□□□ -1.33
Ltb-201ENSMUST00000025262 DstQ91ZU6 7393 aaKnown RBP6.7□□□□□ -1.34
Ltb-201ENSMUST00000025262 Gm40460A0A1B0GR10 244 aa6.69□□□□□ -1.34
Ltb-201ENSMUST00000025262 Gm7579A0A1B0GRJ4 243 aa6.69□□□□□ -1.34
Ltb-201ENSMUST00000025262 Krtap5-5Q2TA51 241 aa6.69□□□□□ -1.34
Ltb-201ENSMUST00000025262 Krtap5-4Q62220 223 aa6.69□□□□□ -1.34
Ltb-201ENSMUST00000025262 Gm10153A0A1B0GRL1 320 aa6.65□□□□□ -1.34
Ltb-201ENSMUST00000025262 Krtap4-16Q91W93 202 aa6.65□□□□□ -1.34
Ltb-201ENSMUST00000025262 Krtap19-4Q925H7 84 aa6.61□□□□□ -1.35
Ltb-201ENSMUST00000025262 Camk2n1Q6QWF9 78 aa6.58□□□□□ -1.36
Ltb-201ENSMUST00000025262 Gm10272F7CZ33 110 aa6.56□□□□□ -1.36
Ltb-201ENSMUST00000025262 Gm45618A0A1B0GSA0 219 aa6.45□□□□□ -1.38
Ltb-201ENSMUST00000025262 Gm11938Q9D3H4 131 aa6.37□□□□□ -1.39
Ltb-201ENSMUST00000025262 Mt1P02802 61 aaKnown RBP6.35□□□□□ -1.39
Ltb-201ENSMUST00000025262 Sprr2fO70557 76 aa6.32□□□□□ -1.4
Ltb-201ENSMUST00000025262 Krtap7-1Q9D3I6 87 aa6.3□□□□□ -1.4
Ltb-201ENSMUST00000025262 AhnakE9Q616 5656 aaKnown RBP6.26□□□□□ -1.41
Ltb-201ENSMUST00000025262 Gm40193A0A1B0GT39 78 aa6.14□□□□□ -1.43
Ltb-201ENSMUST00000025262 Tnp1P10856 55 aa5.95□□□□□ -1.46
Ltb-201ENSMUST00000025262 Mt3P28184 68 aa5.95□□□□□ -1.46
Ltb-201ENSMUST00000025262 Mp68P56379 58 aa5.93□□□□□ -1.46
Ltb-201ENSMUST00000025262 Lce3cQ91V05 98 aa5.92□□□□□ -1.46
Ltb-201ENSMUST00000025262 Lce3dE9Q8V1 98 aa5.82□□□□□ -1.48
Ltb-201ENSMUST00000025262 A0A1Y7VLE6 161 aa5.64□□□□□ -1.51
Ltb-201ENSMUST00000025262 ObscnA2AAJ9 8891 aaKnown RBP5.62□□□□□ -1.51
Ltb-201ENSMUST00000025262 Gm10100J3QK64 120 aa5.57□□□□□ -1.52
Ltb-201ENSMUST00000025262 Lce3eF8VQJ0 98 aa5.52□□□□□ -1.53
Ltb-201ENSMUST00000025262 Lce3fQ6PAI4 98 aa5.52□□□□□ -1.53
Ltb-201ENSMUST00000025262 4933428G20RikQ9D3X4 101 aa5.3□□□□□ -1.56
Ltb-201ENSMUST00000025262 Lce3aQ497I5 98 aa5.28□□□□□ -1.56
Ltb-201ENSMUST00000025262 Gm20538F6Z9R1 75 aa5.23□□□□□ -1.57
Ltb-201ENSMUST00000025262 Sprr2eO70556 76 aa5.2□□□□□ -1.58
Ltb-201ENSMUST00000025262 Ndufaf8A2AMZ4 74 aa5.09□□□□□ -1.59
Ltb-201ENSMUST00000025262 Sprr2dO70555 85 aa5.06□□□□□ -1.6
Ltb-201ENSMUST00000025262 Sprr2hO70559 108 aa5.06□□□□□ -1.6
Ltb-201ENSMUST00000025262 Gm10024A0A0A0MQA4 119 aa4.97□□□□□ -1.61
Ltb-201ENSMUST00000025262 A0A1Y7VJ07 166 aa4.94□□□□□ -1.62
Ltb-201ENSMUST00000025262 Muc16A0A140LJ72 8478 aa4.89□□□□□ -1.63
Ltb-201ENSMUST00000025262 Gm29735A0A1B0GT06 219 aa4.86□□□□□ -1.63
Ltb-201ENSMUST00000025262 Gm10142J3KMP7 120 aa4.56□□□□□ -1.68
Ltb-201ENSMUST00000025262 Gm11567Q9D141 195 aa4.56□□□□□ -1.68
Ltb-201ENSMUST00000025262 1110025L11RikO09048 78 aa4.38□□□□□ -1.71
Ltb-201ENSMUST00000025262 Krtap6-5Q925H3 78 aa4.38□□□□□ -1.71
Ltb-201ENSMUST00000025262 A030003K21RikA0A1Y7VIM3 128 aa4.35□□□□□ -1.71
Ltb-201ENSMUST00000025262 Gm9112A2AI92 75 aa4.27□□□□□ -1.73
Ltb-201ENSMUST00000025262 Krtap28-10A0A1Y7VP58 119 aa4.2□□□□□ -1.74
Ltb-201ENSMUST00000025262 Krtap5-1Q64507 230 aa4.1□□□□□ -1.75
Ltb-201ENSMUST00000025262 Gm10229O08631 77 aa3.96□□□□□ -1.78
Ltb-201ENSMUST00000025262 Sprr2bO70554 98 aa3.91□□□□□ -1.78
Ltb-201ENSMUST00000025262 Krtap31-2Q8CAY5 177 aa3.85□□□□□ -1.79
Ltb-201ENSMUST00000025262 Krtap31-1Q9D644 177 aa3.85□□□□□ -1.79
Ltb-201ENSMUST00000025262 Krtap6-2O08884 159 aa3.65□□□□□ -1.83
Ltb-201ENSMUST00000025262 Krtap21-1Q925H4 128 aa3.51□□□□□ -1.85
Ltb-201ENSMUST00000025262 A0A286YCP9 139 aa3.35□□□□□ -1.87
Ltb-201ENSMUST00000025262 Gm6217A0A1Y7VJK9 128 aa3.29□□□□□ -1.88
Ltb-201ENSMUST00000025262 Phgr1Q8K0G7 91 aa2.86□□□□□ -1.95
Ltb-201ENSMUST00000025262 Gm4559A4IF42 199 aa2.85□□□□□ -1.95
Ltb-201ENSMUST00000025262 A030005K14RikA0A1Y7VNY1 122 aa2.67□□□□□ -1.98
Ltb-201ENSMUST00000025262 A030014E15RikA0A1Y7VJV2 120 aa2.37□□□□□ -2.03
Ltb-201ENSMUST00000025262 Krtap28-13A0A087WQP5 138 aa2.07□□□□□ -2.08
Ltb-201ENSMUST00000025262 Gm7544A0A1Y7VJ58 118 aa2.02□□□□□ -2.09
Retrieved 80 of 22,080 RNA–protein pairs in 87 ms