RNA–Protein interactions for RNA: ENSMUST00000022356.11

Usp54-201, Transcript of Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp54, Length 6,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54-201ENSMUST00000022356 Sprr2hO70559 108 aa2.6□□□□□ -1.99
Usp54-201ENSMUST00000022356 Krtap17-1A2A5X6 109 aa2.58□□□□□ -2
Usp54-201ENSMUST00000022356 Eppk1Q8R0W0 6548 aa2.57□□□□□ -2
Usp54-201ENSMUST00000022356 Gm11938Q9D3H4 131 aa2.56□□□□□ -2
Usp54-201ENSMUST00000022356 Krtap4-7Q9D732 168 aa2.56□□□□□ -2
Usp54-201ENSMUST00000022356 2300003K06RikA2A4M0 262 aa2.55□□□□□ -2
Usp54-201ENSMUST00000022356 Krtap4-9B1AQA9 244 aa2.53□□□□□ -2
Usp54-201ENSMUST00000022356 Mt3P28184 68 aa2.52□□□□□ -2.01
Usp54-201ENSMUST00000022356 Muc5bE9Q5I3 4800 aa2.51□□□□□ -2.01
Usp54-201ENSMUST00000022356 4932415D10RikA0A1W2P6U8 4986 aa2.5□□□□□ -2.01
Usp54-201ENSMUST00000022356 Krtap31-1Q9D644 177 aa2.48□□□□□ -2.01
Usp54-201ENSMUST00000022356 Ubr4A2AN08 5180 aa2.47□□□□□ -2.01
Usp54-201ENSMUST00000022356 Ush2AQ2QI47 5193 aa2.44□□□□□ -2.02
Usp54-201ENSMUST00000022356 Lce1a1Q9CQH5 143 aa2.43□□□□□ -2.02
Usp54-201ENSMUST00000022356 Krtap4-13Q9D7P3 165 aa2.43□□□□□ -2.02
Usp54-201ENSMUST00000022356 Syne2Q6ZWQ0 6874 aaKnown RBP2.39□□□□□ -2.03
Usp54-201ENSMUST00000022356 Lce1kJ3QP15 125 aa2.37□□□□□ -2.03
Usp54-201ENSMUST00000022356 ZanO88799 5376 aa2.33□□□□□ -2.04
Usp54-201ENSMUST00000022356 Fat4Q2PZL6 4981 aa2.32□□□□□ -2.04
Usp54-201ENSMUST00000022356 Hmcn2A2AJ76 5100 aa2.31□□□□□ -2.04
Usp54-201ENSMUST00000022356 Krtap20-2E9Q0A8 60 aa2.29□□□□□ -2.04
Usp54-201ENSMUST00000022356 Lce1a2Q9D1K4 149 aa2.28□□□□□ -2.04
Usp54-201ENSMUST00000022356 Sprr2dO70555 85 aa2.27□□□□□ -2.05
Usp54-201ENSMUST00000022356 Mt1P02802 61 aaKnown RBP2.25□□□□□ -2.05
Usp54-201ENSMUST00000022356 Mdn1A2ANY6 5589 aaKnown RBP2.22□□□□□ -2.05
Usp54-201ENSMUST00000022356 Sprr2bO70554 98 aa2.21□□□□□ -2.06
Usp54-201ENSMUST00000022356 Rnf213E9Q555 5152 aaKnown RBP2.19□□□□□ -2.06
Usp54-201ENSMUST00000022356 Gm11554B1AQB2 190 aa2.18□□□□□ -2.06
Usp54-201ENSMUST00000022356 Fsip2A2ARZ3 6995 aa2.16□□□□□ -2.06
Usp54-201ENSMUST00000022356 SspoQ8CG65 4998 aa2.14□□□□□ -2.07
Usp54-201ENSMUST00000022356 Gm11555B1AQ89 175 aa2.07□□□□□ -2.08
Usp54-201ENSMUST00000022356 Gpr98Q8VHN7 6298 aaKnown RBP1.89□□□□□ -2.11
Usp54-201ENSMUST00000022356 Gm11559Q9D3H7 191 aa1.87□□□□□ -2.11
Usp54-201ENSMUST00000022356 Krtap4-16Q91W93 202 aa1.86□□□□□ -2.11
Usp54-201ENSMUST00000022356 A0A1Y7VLE6 161 aa1.84□□□□□ -2.11
Usp54-201ENSMUST00000022356 A030003K21RikA0A1Y7VIM3 128 aa1.81□□□□□ -2.12
Usp54-201ENSMUST00000022356 Syne1Q6ZWR6 8799 aa1.8□□□□□ -2.12
Usp54-201ENSMUST00000022356 ObscnA2AAJ9 8891 aaKnown RBP1.8□□□□□ -2.12
Usp54-201ENSMUST00000022356 1110025L11RikO09048 78 aa1.78□□□□□ -2.12
Usp54-201ENSMUST00000022356 Krtap6-5Q925H3 78 aa1.78□□□□□ -2.12
Usp54-201ENSMUST00000022356 Kmt2dQ6PDK2 5588 aa1.78□□□□□ -2.12
Usp54-201ENSMUST00000022356 Gm11639A0A1D5RLM8 5808 aa1.75□□□□□ -2.13
Usp54-201ENSMUST00000022356 Krtap28-10A0A1Y7VP58 119 aa1.75□□□□□ -2.13
Usp54-201ENSMUST00000022356 Muc16A0A140LJ72 8478 aa1.74□□□□□ -2.13
Usp54-201ENSMUST00000022356 Gm6217A0A1Y7VJK9 128 aa1.74□□□□□ -2.13
Usp54-201ENSMUST00000022356 A0A1Y7VJ07 166 aa1.73□□□□□ -2.13
Usp54-201ENSMUST00000022356 Gm10229O08631 77 aa1.72□□□□□ -2.13
Usp54-201ENSMUST00000022356 Krtap9-1Q64526 186 aa1.71□□□□□ -2.14
Usp54-201ENSMUST00000022356 DstQ91ZU6 7393 aaKnown RBP1.69□□□□□ -2.14
Usp54-201ENSMUST00000022356 A030005K14RikA0A1Y7VNY1 122 aa1.66□□□□□ -2.14
Usp54-201ENSMUST00000022356 A030014E15RikA0A1Y7VJV2 120 aa1.66□□□□□ -2.14
Usp54-201ENSMUST00000022356 Macf1Q9QXZ0 7354 aaKnown RBP1.65□□□□□ -2.15
Usp54-201ENSMUST00000022356 A030005L19RikA0A1Y7VIU2 113 aa1.61□□□□□ -2.15
Usp54-201ENSMUST00000022356 Krtap5-2Q9D5Z7 189 aa1.61□□□□□ -2.15
Usp54-201ENSMUST00000022356 Phgr1Q8K0G7 91 aa1.6□□□□□ -2.15
Usp54-201ENSMUST00000022356 Gm11568A2A4M2 211 aa1.59□□□□□ -2.15
Usp54-201ENSMUST00000022356 Hmcn1D3YXG0 5634 aa1.58□□□□□ -2.16
Usp54-201ENSMUST00000022356 Krtap28-13A0A087WQP5 138 aa1.57□□□□□ -2.16
Usp54-201ENSMUST00000022356 Gm4553A0A1B0GSA9 284 aa1.57□□□□□ -2.16
Usp54-201ENSMUST00000022356 Gm7544A0A1Y7VJ58 118 aa1.56□□□□□ -2.16
Usp54-201ENSMUST00000022356 NebE9Q1W3 7152 aa1.55□□□□□ -2.16
Usp54-201ENSMUST00000022356 A0A1Y7VJH8 109 aa1.51□□□□□ -2.17
Usp54-201ENSMUST00000022356 A0A286YCP9 139 aa1.46□□□□□ -2.18
Usp54-201ENSMUST00000022356 Muc19Q6PZE0 7524 aa1.43□□□□□ -2.18
Usp54-201ENSMUST00000022356 Gm11567Q9D141 195 aa1.42□□□□□ -2.18
Usp54-201ENSMUST00000022356 Gm2431E9Q8S1 172 aa1.38□□□□□ -2.19
Usp54-201ENSMUST00000022356 Krtap6-2O08884 159 aa1.38□□□□□ -2.19
Usp54-201ENSMUST00000022356 Gm40460A0A1B0GR10 244 aa1.35□□□□□ -2.19
Usp54-201ENSMUST00000022356 Gm7579A0A1B0GRJ4 243 aa1.35□□□□□ -2.19
Usp54-201ENSMUST00000022356 Krtap5-5Q2TA51 241 aa1.35□□□□□ -2.19
Usp54-201ENSMUST00000022356 Krtap5-4Q62220 223 aa1.35□□□□□ -2.19
Usp54-201ENSMUST00000022356 AhnakE9Q616 5656 aaKnown RBP1.34□□□□□ -2.2
Usp54-201ENSMUST00000022356 Gm45337A0A1B0GS71 263 aa1.33□□□□□ -2.2
Usp54-201ENSMUST00000022356 Gm39115A0A1B0GSH7 232 aa1.3□□□□□ -2.2
Usp54-201ENSMUST00000022356 Gm10153A0A1B0GRL1 320 aa1.24□□□□□ -2.21
Usp54-201ENSMUST00000022356 Gm45618A0A1B0GSA0 219 aa1.21□□□□□ -2.22
Usp54-201ENSMUST00000022356 Krtap21-1Q925H4 128 aa1.2□□□□□ -2.22
Usp54-201ENSMUST00000022356 Gm29735A0A1B0GT06 219 aa1.03□□□□□ -2.24
Usp54-201ENSMUST00000022356 Krtap5-1Q64507 230 aa0.83□□□□□ -2.28
Usp54-201ENSMUST00000022356 Gm4559A4IF42 199 aa0.68□□□□□ -2.3
Retrieved 80 of 22,080 RNA–protein pairs in 83 ms