RNA–Protein interactions for RNA: ENSMUST00000021380.9

Trappc6b-201, Transcript of Trafficking protein particle complex subunit 6B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trappc6b, Length 1,255 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6b-201ENSMUST00000021380 Gm12216A0A1W2P827 62 aa8.04□□□□□ -1.12
Trappc6b-201ENSMUST00000021380 Krtap31-2Q8CAY5 177 aa8.03□□□□□ -1.12
Trappc6b-201ENSMUST00000021380 Gm11559Q9D3H7 191 aa8□□□□□ -1.13
Trappc6b-201ENSMUST00000021380 Krtap7-1Q9D3I6 87 aa7.99□□□□□ -1.13
Trappc6b-201ENSMUST00000021380 Gm11639A0A1D5RLM8 5808 aa7.96□□□□□ -1.13
Trappc6b-201ENSMUST00000021380 Ndufs5Q99LY9 106 aa7.96□□□□□ -1.14
Trappc6b-201ENSMUST00000021380 Lce3bQ9CQM7 98 aa7.96□□□□□ -1.14
Trappc6b-201ENSMUST00000021380 Gm10272F7CZ33 110 aa7.91□□□□□ -1.14
Trappc6b-201ENSMUST00000021380 Macf1Q9QXZ0 7354 aaKnown RBP7.9□□□□□ -1.14
Trappc6b-201ENSMUST00000021380 Syne1Q6ZWR6 8799 aa7.89□□□□□ -1.15
Trappc6b-201ENSMUST00000021380 Gm11554B1AQB2 190 aa7.89□□□□□ -1.15
Trappc6b-201ENSMUST00000021380 A030003K21RikA0A1Y7VIM3 128 aa7.86□□□□□ -1.15
Trappc6b-201ENSMUST00000021380 Gm11568A2A4M2 211 aa7.83□□□□□ -1.16
Trappc6b-201ENSMUST00000021380 Sox16Q62247 57 aa7.83□□□□□ -1.16
Trappc6b-201ENSMUST00000021380 Krtap9-1Q64526 186 aa7.83□□□□□ -1.16
Trappc6b-201ENSMUST00000021380 Romo1P60603 79 aa7.82□□□□□ -1.16
Trappc6b-201ENSMUST00000021380 4933415A04RikQ9D443 101 aa7.82□□□□□ -1.16
Trappc6b-201ENSMUST00000021380 Gm4553A0A1B0GSA9 284 aa7.8□□□□□ -1.16
Trappc6b-201ENSMUST00000021380 Kmt2dQ6PDK2 5588 aa7.7□□□□□ -1.18
Trappc6b-201ENSMUST00000021380 Gpr98Q8VHN7 6298 aaKnown RBP7.65□□□□□ -1.19
Trappc6b-201ENSMUST00000021380 A0A286YCP9 139 aa7.62□□□□□ -1.19
Trappc6b-201ENSMUST00000021380 Lce1fB9EJP6 147 aa7.62□□□□□ -1.19
Trappc6b-201ENSMUST00000021380 Lce1cQ9D1C5 147 aa7.62□□□□□ -1.19
Trappc6b-201ENSMUST00000021380 Muc19Q6PZE0 7524 aa7.58□□□□□ -1.2
Trappc6b-201ENSMUST00000021380 Gm6217A0A1Y7VJK9 128 aa7.54□□□□□ -1.2
Trappc6b-201ENSMUST00000021380 Gm2431E9Q8S1 172 aa7.54□□□□□ -1.2
Trappc6b-201ENSMUST00000021380 Gm3646F6S692 53 aa7.54□□□□□ -1.2
Trappc6b-201ENSMUST00000021380 Gm45337A0A1B0GS71 263 aa7.48□□□□□ -1.21
Trappc6b-201ENSMUST00000021380 Tnp1P10856 55 aa7.46□□□□□ -1.22
Trappc6b-201ENSMUST00000021380 Gm11938Q9D3H4 131 aa7.38□□□□□ -1.23
Trappc6b-201ENSMUST00000021380 Mt1P02802 61 aaKnown RBP7.32□□□□□ -1.24
Trappc6b-201ENSMUST00000021380 Gm10153A0A1B0GRL1 320 aa7.31□□□□□ -1.24
Trappc6b-201ENSMUST00000021380 Krtap19-4Q925H7 84 aa7.3□□□□□ -1.24
Trappc6b-201ENSMUST00000021380 Gm40460A0A1B0GR10 244 aa7.22□□□□□ -1.25
Trappc6b-201ENSMUST00000021380 Gm7579A0A1B0GRJ4 243 aa7.22□□□□□ -1.25
Trappc6b-201ENSMUST00000021380 Krtap5-5Q2TA51 241 aa7.22□□□□□ -1.25
Trappc6b-201ENSMUST00000021380 Krtap5-4Q62220 223 aa7.22□□□□□ -1.25
Trappc6b-201ENSMUST00000021380 Gm40193A0A1B0GT39 78 aa7.19□□□□□ -1.26
Trappc6b-201ENSMUST00000021380 Lce3cQ91V05 98 aa7.13□□□□□ -1.27
Trappc6b-201ENSMUST00000021380 Hmcn1D3YXG0 5634 aa7.11□□□□□ -1.27
Trappc6b-201ENSMUST00000021380 Gm39115A0A1B0GSH7 232 aa7.1□□□□□ -1.27
Trappc6b-201ENSMUST00000021380 Krtap31-1Q9D644 177 aa7.07□□□□□ -1.28
Trappc6b-201ENSMUST00000021380 Lce3dE9Q8V1 98 aa7.02□□□□□ -1.29
Trappc6b-201ENSMUST00000021380 DstQ91ZU6 7393 aaKnown RBP7.02□□□□□ -1.29
Trappc6b-201ENSMUST00000021380 Gm10337F7DEP7 55 aa7.01□□□□□ -1.29
Trappc6b-201ENSMUST00000021380 NebE9Q1W3 7152 aa6.99□□□□□ -1.29
Trappc6b-201ENSMUST00000021380 Pcp4P63054 62 aa6.85□□□□□ -1.31
Trappc6b-201ENSMUST00000021380 Lce3eF8VQJ0 98 aa6.8□□□□□ -1.32
Trappc6b-201ENSMUST00000021380 Mt3P28184 68 aa6.8□□□□□ -1.32
Trappc6b-201ENSMUST00000021380 Lce3fQ6PAI4 98 aa6.8□□□□□ -1.32
Trappc6b-201ENSMUST00000021380 Krtap4-16Q91W93 202 aa6.8□□□□□ -1.32
Trappc6b-201ENSMUST00000021380 Gm10100J3QK64 120 aa6.69□□□□□ -1.34
Trappc6b-201ENSMUST00000021380 ObscnA2AAJ9 8891 aaKnown RBP6.67□□□□□ -1.34
Trappc6b-201ENSMUST00000021380 Sprr2fO70557 76 aa6.64□□□□□ -1.35
Trappc6b-201ENSMUST00000021380 4933428G20RikQ9D3X4 101 aa6.62□□□□□ -1.35
Trappc6b-201ENSMUST00000021380 Gm45618A0A1B0GSA0 219 aa6.61□□□□□ -1.35
Trappc6b-201ENSMUST00000021380 Lce3aQ497I5 98 aa6.51□□□□□ -1.37
Trappc6b-201ENSMUST00000021380 Sprr2dO70555 85 aa6.48□□□□□ -1.37
Trappc6b-201ENSMUST00000021380 AhnakE9Q616 5656 aaKnown RBP6.47□□□□□ -1.37
Trappc6b-201ENSMUST00000021380 Gm11567Q9D141 195 aa6.31□□□□□ -1.4
Trappc6b-201ENSMUST00000021380 Mp68P56379 58 aa6.3□□□□□ -1.4
Trappc6b-201ENSMUST00000021380 Gm29735A0A1B0GT06 219 aa6.08□□□□□ -1.44
Trappc6b-201ENSMUST00000021380 Gm20538F6Z9R1 75 aa6.06□□□□□ -1.44
Trappc6b-201ENSMUST00000021380 Sprr2eO70556 76 aa6□□□□□ -1.45
Trappc6b-201ENSMUST00000021380 Gm10024A0A0A0MQA4 119 aa5.81□□□□□ -1.48
Trappc6b-201ENSMUST00000021380 Gm10142J3KMP7 120 aa5.76□□□□□ -1.49
Trappc6b-201ENSMUST00000021380 Sprr2hO70559 108 aa5.57□□□□□ -1.52
Trappc6b-201ENSMUST00000021380 SvipQ3UZP4 77 aa5.46□□□□□ -1.54
Trappc6b-201ENSMUST00000021380 1110025L11RikO09048 78 aa5.26□□□□□ -1.57
Trappc6b-201ENSMUST00000021380 Krtap6-5Q925H3 78 aa5.26□□□□□ -1.57
Trappc6b-201ENSMUST00000021380 Muc16A0A140LJ72 8478 aa5.23□□□□□ -1.57
Trappc6b-201ENSMUST00000021380 Gm10229O08631 77 aa4.72□□□□□ -1.65
Trappc6b-201ENSMUST00000021380 Ndufaf8A2AMZ4 74 aa4.37□□□□□ -1.71
Trappc6b-201ENSMUST00000021380 Krtap5-1Q64507 230 aa4.25□□□□□ -1.73
Trappc6b-201ENSMUST00000021380 Krtap21-1Q925H4 128 aa4.24□□□□□ -1.73
Trappc6b-201ENSMUST00000021380 Krtap6-2O08884 159 aa4.22□□□□□ -1.73
Trappc6b-201ENSMUST00000021380 Sprr2bO70554 98 aa4.19□□□□□ -1.74
Trappc6b-201ENSMUST00000021380 Gm4559A4IF42 199 aa4□□□□□ -1.77
Trappc6b-201ENSMUST00000021380 Phgr1Q8K0G7 91 aa3.41□□□□□ -1.86
Trappc6b-201ENSMUST00000021380 Gm9112A2AI92 75 aa3.2□□□□□ -1.9
Retrieved 80 of 22,080 RNA–protein pairs in 170.7 ms