RNA–Protein interactions for RNA: ENSMUST00000021380.9

Trappc6b-201, Transcript of Trafficking protein particle complex subunit 6B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trappc6b, Length 1,255 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6b-201ENSMUST00000021380 Gm12216A0A1W2P827 62 aa8,04□□□□□ -1,12
Trappc6b-201ENSMUST00000021380 Krtap31-2Q8CAY5 177 aa8,03□□□□□ -1,12
Trappc6b-201ENSMUST00000021380 Gm11559Q9D3H7 191 aa8□□□□□ -1,13
Trappc6b-201ENSMUST00000021380 Krtap7-1Q9D3I6 87 aa7,99□□□□□ -1,13
Trappc6b-201ENSMUST00000021380 Gm11639A0A1D5RLM8 5808 aa7,96□□□□□ -1,13
Trappc6b-201ENSMUST00000021380 Ndufs5Q99LY9 106 aa7,96□□□□□ -1,14
Trappc6b-201ENSMUST00000021380 Lce3bQ9CQM7 98 aa7,96□□□□□ -1,14
Trappc6b-201ENSMUST00000021380 Gm10272F7CZ33 110 aa7,91□□□□□ -1,14
Trappc6b-201ENSMUST00000021380 Macf1Q9QXZ0 7354 aaKnown RBP7,9□□□□□ -1,14
Trappc6b-201ENSMUST00000021380 Syne1Q6ZWR6 8799 aa7,89□□□□□ -1,15
Trappc6b-201ENSMUST00000021380 Gm11554B1AQB2 190 aa7,89□□□□□ -1,15
Trappc6b-201ENSMUST00000021380 A030003K21RikA0A1Y7VIM3 128 aa7,86□□□□□ -1,15
Trappc6b-201ENSMUST00000021380 Gm11568A2A4M2 211 aa7,83□□□□□ -1,16
Trappc6b-201ENSMUST00000021380 Sox16Q62247 57 aa7,83□□□□□ -1,16
Trappc6b-201ENSMUST00000021380 Krtap9-1Q64526 186 aa7,83□□□□□ -1,16
Trappc6b-201ENSMUST00000021380 Romo1P60603 79 aa7,82□□□□□ -1,16
Trappc6b-201ENSMUST00000021380 4933415A04RikQ9D443 101 aa7,82□□□□□ -1,16
Trappc6b-201ENSMUST00000021380 Gm4553A0A1B0GSA9 284 aa7,8□□□□□ -1,16
Trappc6b-201ENSMUST00000021380 Kmt2dQ6PDK2 5588 aa7,7□□□□□ -1,18
Trappc6b-201ENSMUST00000021380 Gpr98Q8VHN7 6298 aaKnown RBP7,65□□□□□ -1,19
Trappc6b-201ENSMUST00000021380 A0A286YCP9 139 aa7,62□□□□□ -1,19
Trappc6b-201ENSMUST00000021380 Lce1fB9EJP6 147 aa7,62□□□□□ -1,19
Trappc6b-201ENSMUST00000021380 Lce1cQ9D1C5 147 aa7,62□□□□□ -1,19
Trappc6b-201ENSMUST00000021380 Muc19Q6PZE0 7524 aa7,58□□□□□ -1,2
Trappc6b-201ENSMUST00000021380 Gm6217A0A1Y7VJK9 128 aa7,54□□□□□ -1,2
Trappc6b-201ENSMUST00000021380 Gm2431E9Q8S1 172 aa7,54□□□□□ -1,2
Trappc6b-201ENSMUST00000021380 Gm3646F6S692 53 aa7,54□□□□□ -1,2
Trappc6b-201ENSMUST00000021380 Gm45337A0A1B0GS71 263 aa7,48□□□□□ -1,21
Trappc6b-201ENSMUST00000021380 Tnp1P10856 55 aa7,46□□□□□ -1,22
Trappc6b-201ENSMUST00000021380 Gm11938Q9D3H4 131 aa7,38□□□□□ -1,23
Trappc6b-201ENSMUST00000021380 Mt1P02802 61 aaKnown RBP7,32□□□□□ -1,24
Trappc6b-201ENSMUST00000021380 Gm10153A0A1B0GRL1 320 aa7,31□□□□□ -1,24
Trappc6b-201ENSMUST00000021380 Krtap19-4Q925H7 84 aa7,3□□□□□ -1,24
Trappc6b-201ENSMUST00000021380 Gm40460A0A1B0GR10 244 aa7,22□□□□□ -1,25
Trappc6b-201ENSMUST00000021380 Gm7579A0A1B0GRJ4 243 aa7,22□□□□□ -1,25
Trappc6b-201ENSMUST00000021380 Krtap5-5Q2TA51 241 aa7,22□□□□□ -1,25
Trappc6b-201ENSMUST00000021380 Krtap5-4Q62220 223 aa7,22□□□□□ -1,25
Trappc6b-201ENSMUST00000021380 Gm40193A0A1B0GT39 78 aa7,19□□□□□ -1,26
Trappc6b-201ENSMUST00000021380 Lce3cQ91V05 98 aa7,13□□□□□ -1,27
Trappc6b-201ENSMUST00000021380 Hmcn1D3YXG0 5634 aa7,11□□□□□ -1,27
Trappc6b-201ENSMUST00000021380 Gm39115A0A1B0GSH7 232 aa7,1□□□□□ -1,27
Trappc6b-201ENSMUST00000021380 Krtap31-1Q9D644 177 aa7,07□□□□□ -1,28
Trappc6b-201ENSMUST00000021380 Lce3dE9Q8V1 98 aa7,02□□□□□ -1,29
Trappc6b-201ENSMUST00000021380 DstQ91ZU6 7393 aaKnown RBP7,02□□□□□ -1,29
Trappc6b-201ENSMUST00000021380 Gm10337F7DEP7 55 aa7,01□□□□□ -1,29
Trappc6b-201ENSMUST00000021380 NebE9Q1W3 7152 aa6,99□□□□□ -1,29
Trappc6b-201ENSMUST00000021380 Pcp4P63054 62 aa6,85□□□□□ -1,31
Trappc6b-201ENSMUST00000021380 Lce3eF8VQJ0 98 aa6,8□□□□□ -1,32
Trappc6b-201ENSMUST00000021380 Mt3P28184 68 aa6,8□□□□□ -1,32
Trappc6b-201ENSMUST00000021380 Lce3fQ6PAI4 98 aa6,8□□□□□ -1,32
Trappc6b-201ENSMUST00000021380 Krtap4-16Q91W93 202 aa6,8□□□□□ -1,32
Trappc6b-201ENSMUST00000021380 Gm10100J3QK64 120 aa6,69□□□□□ -1,34
Trappc6b-201ENSMUST00000021380 ObscnA2AAJ9 8891 aaKnown RBP6,67□□□□□ -1,34
Trappc6b-201ENSMUST00000021380 Sprr2fO70557 76 aa6,64□□□□□ -1,35
Trappc6b-201ENSMUST00000021380 4933428G20RikQ9D3X4 101 aa6,62□□□□□ -1,35
Trappc6b-201ENSMUST00000021380 Gm45618A0A1B0GSA0 219 aa6,61□□□□□ -1,35
Trappc6b-201ENSMUST00000021380 Lce3aQ497I5 98 aa6,51□□□□□ -1,37
Trappc6b-201ENSMUST00000021380 Sprr2dO70555 85 aa6,48□□□□□ -1,37
Trappc6b-201ENSMUST00000021380 AhnakE9Q616 5656 aaKnown RBP6,47□□□□□ -1,37
Trappc6b-201ENSMUST00000021380 Gm11567Q9D141 195 aa6,31□□□□□ -1,4
Trappc6b-201ENSMUST00000021380 Mp68P56379 58 aa6,3□□□□□ -1,4
Trappc6b-201ENSMUST00000021380 Gm29735A0A1B0GT06 219 aa6,08□□□□□ -1,44
Trappc6b-201ENSMUST00000021380 Gm20538F6Z9R1 75 aa6,06□□□□□ -1,44
Trappc6b-201ENSMUST00000021380 Sprr2eO70556 76 aa6□□□□□ -1,45
Trappc6b-201ENSMUST00000021380 Gm10024A0A0A0MQA4 119 aa5,81□□□□□ -1,48
Trappc6b-201ENSMUST00000021380 Gm10142J3KMP7 120 aa5,76□□□□□ -1,49
Trappc6b-201ENSMUST00000021380 Sprr2hO70559 108 aa5,57□□□□□ -1,52
Trappc6b-201ENSMUST00000021380 SvipQ3UZP4 77 aa5,46□□□□□ -1,54
Trappc6b-201ENSMUST00000021380 1110025L11RikO09048 78 aa5,26□□□□□ -1,57
Trappc6b-201ENSMUST00000021380 Krtap6-5Q925H3 78 aa5,26□□□□□ -1,57
Trappc6b-201ENSMUST00000021380 Muc16A0A140LJ72 8478 aa5,23□□□□□ -1,57
Trappc6b-201ENSMUST00000021380 Gm10229O08631 77 aa4,72□□□□□ -1,65
Trappc6b-201ENSMUST00000021380 Ndufaf8A2AMZ4 74 aa4,37□□□□□ -1,71
Trappc6b-201ENSMUST00000021380 Krtap5-1Q64507 230 aa4,25□□□□□ -1,73
Trappc6b-201ENSMUST00000021380 Krtap21-1Q925H4 128 aa4,24□□□□□ -1,73
Trappc6b-201ENSMUST00000021380 Krtap6-2O08884 159 aa4,22□□□□□ -1,73
Trappc6b-201ENSMUST00000021380 Sprr2bO70554 98 aa4,19□□□□□ -1,74
Trappc6b-201ENSMUST00000021380 Gm4559A4IF42 199 aa4□□□□□ -1,77
Trappc6b-201ENSMUST00000021380 Phgr1Q8K0G7 91 aa3,41□□□□□ -1,86
Trappc6b-201ENSMUST00000021380 Gm9112A2AI92 75 aa3,2□□□□□ -1,9
Retrieved 80 of 22,080 RNA–protein pairs in 9,7 ms