RNA–Protein interactions for RNA: ENSMUST00000015499.13

Cd48-201, Transcript of CD48 antigen, mousemouse

TSL 1 (best) BASIC

Gene Cd48, Length 922 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48-201ENSMUST00000015499 Limd2Q8BGB5 128 aa3.36□□□□□ -1.87
Cd48-201ENSMUST00000015499 Gm20537G3UYK7 97 aa3.35□□□□□ -1.87
Cd48-201ENSMUST00000015499 Mt4P47945 62 aa3.35□□□□□ -1.87
Cd48-201ENSMUST00000015499 Krtap6-3A0A087WQL6 57 aa3.34□□□□□ -1.87
Cd48-201ENSMUST00000015499 BC029722A0A0N4SW31 51 aa3.34□□□□□ -1.87
Cd48-201ENSMUST00000015499 4933415A04RikQ9D443 101 aa3.34□□□□□ -1.87
Cd48-201ENSMUST00000015499 Krtap5-5Q2TA51 241 aa3.33□□□□□ -1.88
Cd48-201ENSMUST00000015499 Gm17606F6ZL36 78 aa3.32□□□□□ -1.88
Cd48-201ENSMUST00000015499 Gm21798J3QNU5 87 aa3.3□□□□□ -1.88
Cd48-201ENSMUST00000015499 Spink7Q6IE32 76 aa3.28□□□□□ -1.88
Cd48-201ENSMUST00000015499 Cox6b2Q80ZN9 88 aa3.28□□□□□ -1.88
Cd48-201ENSMUST00000015499 Brk1Q91VR8 75 aa3.28□□□□□ -1.88
Cd48-201ENSMUST00000015499 Ndufaf8A2AMZ4 74 aa3.27□□□□□ -1.89
Cd48-201ENSMUST00000015499 Romo1P60603 79 aa3.27□□□□□ -1.89
Cd48-201ENSMUST00000015499 Ndufc1Q9CQY9 76 aa3.26□□□□□ -1.89
Cd48-201ENSMUST00000015499 Krtap8-1O08633 61 aa3.25□□□□□ -1.89
Cd48-201ENSMUST00000015499 Mt2P02798 61 aa3.25□□□□□ -1.89
Cd48-201ENSMUST00000015499 Sprr2kO70562 68 aa3.23□□□□□ -1.89
Cd48-201ENSMUST00000015499 Atox1O08997 68 aaKnown RBP3.22□□□□□ -1.89
Cd48-201ENSMUST00000015499 Defb1P56386 69 aa3.22□□□□□ -1.89
Cd48-201ENSMUST00000015499 SptssbQ925E8 76 aa3.21□□□□□ -1.9
Cd48-201ENSMUST00000015499 Lce3fQ6PAI4 98 aa3.2□□□□□ -1.9
Cd48-201ENSMUST00000015499 Lce3cQ91V05 98 aa3.2□□□□□ -1.9
Cd48-201ENSMUST00000015499 4930518I15RikQ3V2W7 57 aa3.19□□□□□ -1.9
Cd48-201ENSMUST00000015499 Gm10382Q3V0T5 144 aa3.18□□□□□ -1.9
Cd48-201ENSMUST00000015499 Krtap22-2J3QNX6 67 aa3.12□□□□□ -1.91
Cd48-201ENSMUST00000015499 Krtap20-2E9Q0A8 60 aa3.08□□□□□ -1.92
Cd48-201ENSMUST00000015499 Sprr2gO70558 76 aa3.07□□□□□ -1.92
Cd48-201ENSMUST00000015499 Serp2Q6TAW2 65 aa3.07□□□□□ -1.92
Cd48-201ENSMUST00000015499 Kmt2dQ6PDK2 5588 aa3.07□□□□□ -1.92
Cd48-201ENSMUST00000015499 Gm40460A0A1B0GR10 244 aa3.05□□□□□ -1.92
Cd48-201ENSMUST00000015499 Sprr2a3Q4KL71 83 aa3.05□□□□□ -1.92
Cd48-201ENSMUST00000015499 Sprr2a1Q9CQK8 83 aa3.05□□□□□ -1.92
Cd48-201ENSMUST00000015499 Gm17402F6Z0L5 76 aa3.02□□□□□ -1.93
Cd48-201ENSMUST00000015499 Gm10229O08631 77 aa3.02□□□□□ -1.93
Cd48-201ENSMUST00000015499 B230307C23RikQ8BLB2 64 aa3.01□□□□□ -1.93
Cd48-201ENSMUST00000015499 Eppk1Q8R0W0 6548 aa3.01□□□□□ -1.93
Cd48-201ENSMUST00000015499 Krtap6-5Q925H3 78 aa2.98□□□□□ -1.93
Cd48-201ENSMUST00000015499 Coa5Q99M07 74 aa2.98□□□□□ -1.93
Cd48-201ENSMUST00000015499 Krtap7-1Q9D3I6 87 aa2.97□□□□□ -1.93
Cd48-201ENSMUST00000015499 2310046K23RikA0A0A6YVW6 87 aa2.95□□□□□ -1.94
Cd48-201ENSMUST00000015499 Cdc42se1Q8BHL7 80 aa2.94□□□□□ -1.94
Cd48-201ENSMUST00000015499 Gm9955Q8CEJ8 102 aa2.92□□□□□ -1.94
Cd48-201ENSMUST00000015499 SnurfQ9WU12 71 aa2.92□□□□□ -1.94
Cd48-201ENSMUST00000015499 Gm20661K7N787 53 aa2.89□□□□□ -1.95
Cd48-201ENSMUST00000015499 Krtap19-9bQ99NG9 58 aa2.89□□□□□ -1.95
Cd48-201ENSMUST00000015499 Gm40193A0A1B0GT39 78 aa2.88□□□□□ -1.95
Cd48-201ENSMUST00000015499 Uqcr11Q9CPX8 56 aa2.84□□□□□ -1.95
Cd48-201ENSMUST00000015499 Macf1Q9QXZ0 7354 aaKnown RBP2.8□□□□□ -1.96
Cd48-201ENSMUST00000015499 Gm11639A0A1D5RLM8 5808 aa2.79□□□□□ -1.96
Cd48-201ENSMUST00000015499 Sprr2iO70560 76 aa2.77□□□□□ -1.97
Cd48-201ENSMUST00000015499 Lce3eF8VQJ0 98 aa2.7□□□□□ -1.98
Cd48-201ENSMUST00000015499 Ndufb1P0DN34 57 aa2.7□□□□□ -1.98
Cd48-201ENSMUST00000015499 Gpr98Q8VHN7 6298 aaKnown RBP2.69□□□□□ -1.98
Cd48-201ENSMUST00000015499 Syne1Q6ZWR6 8799 aa2.67□□□□□ -1.98
Cd48-201ENSMUST00000015499 Lce3bQ9CQM7 98 aa2.65□□□□□ -1.99
Cd48-201ENSMUST00000015499 Muc19Q6PZE0 7524 aa2.64□□□□□ -1.99
Cd48-201ENSMUST00000015499 Hmcn1D3YXG0 5634 aa2.55□□□□□ -2
Cd48-201ENSMUST00000015499 DstQ91ZU6 7393 aaKnown RBP2.53□□□□□ -2.01
Cd48-201ENSMUST00000015499 Krtap19-4Q925H7 84 aa2.49□□□□□ -2.01
Cd48-201ENSMUST00000015499 NebE9Q1W3 7152 aa2.48□□□□□ -2.01
Cd48-201ENSMUST00000015499 Gm3880A0A1B0GSB3 72 aa2.47□□□□□ -2.01
Cd48-201ENSMUST00000015499 Krtap6-2O08884 159 aa2.47□□□□□ -2.01
Cd48-201ENSMUST00000015499 Gm11938Q9D3H4 131 aa2.47□□□□□ -2.01
Cd48-201ENSMUST00000015499 Mt1P02802 61 aaKnown RBP2.45□□□□□ -2.02
Cd48-201ENSMUST00000015499 Krtap4-16Q91W93 202 aa2.37□□□□□ -2.03
Cd48-201ENSMUST00000015499 4933428G20RikQ9D3X4 101 aa2.35□□□□□ -2.03
Cd48-201ENSMUST00000015499 Tnp1P10856 55 aa2.33□□□□□ -2.04
Cd48-201ENSMUST00000015499 Sprr2fO70557 76 aa2.32□□□□□ -2.04
Cd48-201ENSMUST00000015499 AhnakE9Q616 5656 aaKnown RBP2.31□□□□□ -2.04
Cd48-201ENSMUST00000015499 ObscnA2AAJ9 8891 aaKnown RBP2.22□□□□□ -2.05
Cd48-201ENSMUST00000015499 Krtap21-1Q925H4 128 aa2.06□□□□□ -2.08
Cd48-201ENSMUST00000015499 1110025L11RikO09048 78 aa2.05□□□□□ -2.08
Cd48-201ENSMUST00000015499 Sprr2dO70555 85 aa2.04□□□□□ -2.08
Cd48-201ENSMUST00000015499 Sprr2eO70556 76 aa2□□□□□ -2.09
Cd48-201ENSMUST00000015499 Gm10024A0A0A0MQA4 119 aa1.97□□□□□ -2.09
Cd48-201ENSMUST00000015499 Muc16A0A140LJ72 8478 aa1.86□□□□□ -2.11
Cd48-201ENSMUST00000015499 Sprr2hO70559 108 aa1.86□□□□□ -2.11
Cd48-201ENSMUST00000015499 Sprr2bO70554 98 aa1.43□□□□□ -2.18
Cd48-201ENSMUST00000015499 Phgr1Q8K0G7 91 aa1.13□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 71 ms