RNA–Protein interactions for RNA: ENSMUST00000005532.8

Nid1-201, Transcript of Nidogen-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nid1, Length 6,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1-201ENSMUST00000005532 Sprr2dO70555 85 aa4.55□□□□□ -1.68
Nid1-201ENSMUST00000005532 4932415D10RikA0A1W2P6U8 4986 aa4.54□□□□□ -1.68
Nid1-201ENSMUST00000005532 A0A1Y7VLE6 161 aa4.53□□□□□ -1.68
Nid1-201ENSMUST00000005532 2300003K06RikA2A4M0 262 aa4.53□□□□□ -1.68
Nid1-201ENSMUST00000005532 Krtap4-7Q9D732 168 aa4.51□□□□□ -1.69
Nid1-201ENSMUST00000005532 Birc6O88738 4882 aa4.5□□□□□ -1.69
Nid1-201ENSMUST00000005532 Gm11938Q9D3H4 131 aa4.46□□□□□ -1.7
Nid1-201ENSMUST00000005532 Krtap4-13Q9D7P3 165 aa4.46□□□□□ -1.7
Nid1-201ENSMUST00000005532 Gm11562A0PK51 136 aa4.42□□□□□ -1.7
Nid1-201ENSMUST00000005532 Mdn1A2ANY6 5589 aaKnown RBP4.4□□□□□ -1.7
Nid1-201ENSMUST00000005532 Syne2Q6ZWQ0 6874 aaKnown RBP4.37□□□□□ -1.71
Nid1-201ENSMUST00000005532 Krtap4-16Q91W93 202 aa4.29□□□□□ -1.72
Nid1-201ENSMUST00000005532 Lce1a1Q9CQH5 143 aa4.28□□□□□ -1.72
Nid1-201ENSMUST00000005532 Muc5bE9Q5I3 4800 aa4.24□□□□□ -1.73
Nid1-201ENSMUST00000005532 Krtap6-3A0A087WQL6 57 aa4.24□□□□□ -1.73
Nid1-201ENSMUST00000005532 Hmcn2A2AJ76 5100 aa4.2□□□□□ -1.74
Nid1-201ENSMUST00000005532 Fsip2A2ARZ3 6995 aa4.18□□□□□ -1.74
Nid1-201ENSMUST00000005532 Lce1kJ3QP15 125 aa4.18□□□□□ -1.74
Nid1-201ENSMUST00000005532 Fat4Q2PZL6 4981 aa4.15□□□□□ -1.74
Nid1-201ENSMUST00000005532 Mt3P28184 68 aa4.15□□□□□ -1.75
Nid1-201ENSMUST00000005532 ZanO88799 5376 aa4.12□□□□□ -1.75
Nid1-201ENSMUST00000005532 A030003K21RikA0A1Y7VIM3 128 aa4.09□□□□□ -1.75
Nid1-201ENSMUST00000005532 Syne1Q6ZWR6 8799 aa4.06□□□□□ -1.76
Nid1-201ENSMUST00000005532 Gm11554B1AQB2 190 aa4.05□□□□□ -1.76
Nid1-201ENSMUST00000005532 Ubr4A2AN08 5180 aa4.02□□□□□ -1.77
Nid1-201ENSMUST00000005532 Abca13Q5SSE9 5034 aa3.95□□□□□ -1.78
Nid1-201ENSMUST00000005532 Ush2AQ2QI47 5193 aa3.88□□□□□ -1.79
Nid1-201ENSMUST00000005532 Rnf213E9Q555 5152 aaKnown RBP3.86□□□□□ -1.79
Nid1-201ENSMUST00000005532 Sprr2bO70554 98 aa3.86□□□□□ -1.79
Nid1-201ENSMUST00000005532 Mt1P02802 61 aaKnown RBP3.85□□□□□ -1.79
Nid1-201ENSMUST00000005532 Gm6217A0A1Y7VJK9 128 aa3.83□□□□□ -1.8
Nid1-201ENSMUST00000005532 Eppk1Q8R0W0 6548 aa3.77□□□□□ -1.81
Nid1-201ENSMUST00000005532 Krtap31-2Q8CAY5 177 aa3.76□□□□□ -1.81
Nid1-201ENSMUST00000005532 Krtap20-2E9Q0A8 60 aa3.74□□□□□ -1.81
Nid1-201ENSMUST00000005532 Krtap28-10A0A1Y7VP58 119 aa3.7□□□□□ -1.82
Nid1-201ENSMUST00000005532 SspoQ8CG65 4998 aa3.68□□□□□ -1.82
Nid1-201ENSMUST00000005532 Gm7544A0A1Y7VJ58 118 aa3.57□□□□□ -1.84
Nid1-201ENSMUST00000005532 A0A1Y7VJH8 109 aa3.51□□□□□ -1.85
Nid1-201ENSMUST00000005532 A0A1Y7VJ07 166 aa3.49□□□□□ -1.85
Nid1-201ENSMUST00000005532 Krtap28-13A0A087WQP5 138 aa3.47□□□□□ -1.85
Nid1-201ENSMUST00000005532 Gm11555B1AQ89 175 aa3.45□□□□□ -1.86
Nid1-201ENSMUST00000005532 A030005L19RikA0A1Y7VIU2 113 aa3.45□□□□□ -1.86
Nid1-201ENSMUST00000005532 A030005K14RikA0A1Y7VNY1 122 aa3.38□□□□□ -1.87
Nid1-201ENSMUST00000005532 ObscnA2AAJ9 8891 aaKnown RBP3.38□□□□□ -1.87
Nid1-201ENSMUST00000005532 NebE9Q1W3 7152 aa3.32□□□□□ -1.88
Nid1-201ENSMUST00000005532 DstQ91ZU6 7393 aaKnown RBP3.28□□□□□ -1.88
Nid1-201ENSMUST00000005532 Macf1Q9QXZ0 7354 aaKnown RBP3.26□□□□□ -1.89
Nid1-201ENSMUST00000005532 A030014E15RikA0A1Y7VJV2 120 aa3.26□□□□□ -1.89
Nid1-201ENSMUST00000005532 1110025L11RikO09048 78 aa3.16□□□□□ -1.9
Nid1-201ENSMUST00000005532 Krtap6-5Q925H3 78 aa3.16□□□□□ -1.9
Nid1-201ENSMUST00000005532 Kmt2dQ6PDK2 5588 aa3.13□□□□□ -1.91
Nid1-201ENSMUST00000005532 Muc16A0A140LJ72 8478 aa3.1□□□□□ -1.91
Nid1-201ENSMUST00000005532 Gm11559Q9D3H7 191 aa3.06□□□□□ -1.92
Nid1-201ENSMUST00000005532 Gm10229O08631 77 aa3.01□□□□□ -1.93
Nid1-201ENSMUST00000005532 Phgr1Q8K0G7 91 aa2.96□□□□□ -1.94
Nid1-201ENSMUST00000005532 Gpr98Q8VHN7 6298 aaKnown RBP2.91□□□□□ -1.94
Nid1-201ENSMUST00000005532 Gm11568A2A4M2 211 aa2.77□□□□□ -1.97
Nid1-201ENSMUST00000005532 Krtap9-1Q64526 186 aa2.77□□□□□ -1.97
Nid1-201ENSMUST00000005532 Gm11639A0A1D5RLM8 5808 aa2.72□□□□□ -1.97
Nid1-201ENSMUST00000005532 Muc19Q6PZE0 7524 aa2.72□□□□□ -1.97
Nid1-201ENSMUST00000005532 Krtap5-2Q9D5Z7 189 aa2.46□□□□□ -2.02
Nid1-201ENSMUST00000005532 A0A286YCP9 139 aa2.43□□□□□ -2.02
Nid1-201ENSMUST00000005532 Hmcn1D3YXG0 5634 aa2.4□□□□□ -2.03
Nid1-201ENSMUST00000005532 Gm4553A0A1B0GSA9 284 aa2.38□□□□□ -2.03
Nid1-201ENSMUST00000005532 Gm11567Q9D141 195 aa2.37□□□□□ -2.03
Nid1-201ENSMUST00000005532 Krtap6-2O08884 159 aa2.37□□□□□ -2.03
Nid1-201ENSMUST00000005532 Gm2431E9Q8S1 172 aa2.27□□□□□ -2.05
Nid1-201ENSMUST00000005532 Krtap21-1Q925H4 128 aa2.22□□□□□ -2.05
Nid1-201ENSMUST00000005532 AhnakE9Q616 5656 aaKnown RBP2.2□□□□□ -2.06
Nid1-201ENSMUST00000005532 Gm10153A0A1B0GRL1 320 aa1.99□□□□□ -2.09
Nid1-201ENSMUST00000005532 Gm45337A0A1B0GS71 263 aa1.93□□□□□ -2.1
Nid1-201ENSMUST00000005532 Gm40460A0A1B0GR10 244 aa1.89□□□□□ -2.11
Nid1-201ENSMUST00000005532 Gm7579A0A1B0GRJ4 243 aa1.89□□□□□ -2.11
Nid1-201ENSMUST00000005532 Krtap5-5Q2TA51 241 aa1.89□□□□□ -2.11
Nid1-201ENSMUST00000005532 Krtap5-4Q62220 223 aa1.89□□□□□ -2.11
Nid1-201ENSMUST00000005532 Gm39115A0A1B0GSH7 232 aa1.87□□□□□ -2.11
Nid1-201ENSMUST00000005532 Gm45618A0A1B0GSA0 219 aa1.65□□□□□ -2.15
Nid1-201ENSMUST00000005532 Krtap5-1Q64507 230 aa1.45□□□□□ -2.18
Nid1-201ENSMUST00000005532 Gm29735A0A1B0GT06 219 aa1.39□□□□□ -2.19
Nid1-201ENSMUST00000005532 Gm4559A4IF42 199 aa0.83□□□□□ -2.28
Retrieved 80 of 22,080 RNA–protein pairs in 65.6 ms