RNA–Protein interactions for RNA: ENSMUST00000004201.7

Col5a3-201, Transcript of Collagen type V alpha 3 chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a3, Length 6,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a3-201ENSMUST00000004201 Gm11563B1AQ90 168 aa4.36□□□□□ -1.71
Col5a3-201ENSMUST00000004201 Gm11595B1AQA7 289 aa4.36□□□□□ -1.71
Col5a3-201ENSMUST00000004201 Krtap4-8B1AQA8 209 aa4.36□□□□□ -1.71
Col5a3-201ENSMUST00000004201 Krtap4-7Q9D732 168 aa4.32□□□□□ -1.72
Col5a3-201ENSMUST00000004201 Krtap4-9B1AQA9 244 aa4.31□□□□□ -1.72
Col5a3-201ENSMUST00000004201 2300003K06RikA2A4M0 262 aa4.3□□□□□ -1.72
Col5a3-201ENSMUST00000004201 Gm11562A0PK51 136 aa4.29□□□□□ -1.72
Col5a3-201ENSMUST00000004201 Fat4Q2PZL6 4981 aa4.24□□□□□ -1.73
Col5a3-201ENSMUST00000004201 Sprr2dO70555 85 aa4.23□□□□□ -1.73
Col5a3-201ENSMUST00000004201 Ubr4A2AN08 5180 aa4.23□□□□□ -1.73
Col5a3-201ENSMUST00000004201 ZanO88799 5376 aa4.19□□□□□ -1.74
Col5a3-201ENSMUST00000004201 Krtap4-13Q9D7P3 165 aa4.19□□□□□ -1.74
Col5a3-201ENSMUST00000004201 Syne1Q6ZWR6 8799 aa4.19□□□□□ -1.74
Col5a3-201ENSMUST00000004201 Gm11938Q9D3H4 131 aa4.15□□□□□ -1.74
Col5a3-201ENSMUST00000004201 Krtap6-3A0A087WQL6 57 aa4.14□□□□□ -1.75
Col5a3-201ENSMUST00000004201 Hmcn2A2AJ76 5100 aa4.13□□□□□ -1.75
Col5a3-201ENSMUST00000004201 Lce1a1Q9CQH5 143 aa4.1□□□□□ -1.75
Col5a3-201ENSMUST00000004201 Rnf213E9Q555 5152 aaKnown RBP4.1□□□□□ -1.75
Col5a3-201ENSMUST00000004201 Krtap4-16Q91W93 202 aa4.1□□□□□ -1.75
Col5a3-201ENSMUST00000004201 Ush2AQ2QI47 5193 aa4.08□□□□□ -1.76
Col5a3-201ENSMUST00000004201 Lce1kJ3QP15 125 aa4.07□□□□□ -1.76
Col5a3-201ENSMUST00000004201 Krtap31-2Q8CAY5 177 aa4.07□□□□□ -1.76
Col5a3-201ENSMUST00000004201 Muc5bE9Q5I3 4800 aa4.04□□□□□ -1.76
Col5a3-201ENSMUST00000004201 Sprr2bO70554 98 aa4.04□□□□□ -1.76
Col5a3-201ENSMUST00000004201 Eppk1Q8R0W0 6548 aa4.02□□□□□ -1.77
Col5a3-201ENSMUST00000004201 Syne2Q6ZWQ0 6874 aaKnown RBP4□□□□□ -1.77
Col5a3-201ENSMUST00000004201 Fsip2A2ARZ3 6995 aa4□□□□□ -1.77
Col5a3-201ENSMUST00000004201 Mt3P28184 68 aa3.99□□□□□ -1.77
Col5a3-201ENSMUST00000004201 Gm11554B1AQB2 190 aa3.86□□□□□ -1.79
Col5a3-201ENSMUST00000004201 SspoQ8CG65 4998 aa3.73□□□□□ -1.81
Col5a3-201ENSMUST00000004201 Mt1P02802 61 aaKnown RBP3.61□□□□□ -1.83
Col5a3-201ENSMUST00000004201 Krtap20-2E9Q0A8 60 aa3.52□□□□□ -1.85
Col5a3-201ENSMUST00000004201 ObscnA2AAJ9 8891 aaKnown RBP3.39□□□□□ -1.87
Col5a3-201ENSMUST00000004201 Muc16A0A140LJ72 8478 aa3.39□□□□□ -1.87
Col5a3-201ENSMUST00000004201 Macf1Q9QXZ0 7354 aaKnown RBP3.32□□□□□ -1.88
Col5a3-201ENSMUST00000004201 Gm11555B1AQ89 175 aa3.28□□□□□ -1.88
Col5a3-201ENSMUST00000004201 Gpr98Q8VHN7 6298 aaKnown RBP3.26□□□□□ -1.89
Col5a3-201ENSMUST00000004201 DstQ91ZU6 7393 aaKnown RBP3.25□□□□□ -1.89
Col5a3-201ENSMUST00000004201 NebE9Q1W3 7152 aa3.24□□□□□ -1.89
Col5a3-201ENSMUST00000004201 Kmt2dQ6PDK2 5588 aa3.22□□□□□ -1.89
Col5a3-201ENSMUST00000004201 1110025L11RikO09048 78 aa3□□□□□ -1.93
Col5a3-201ENSMUST00000004201 Krtap6-5Q925H3 78 aa3□□□□□ -1.93
Col5a3-201ENSMUST00000004201 Gm11559Q9D3H7 191 aa2.88□□□□□ -1.95
Col5a3-201ENSMUST00000004201 Gm11639A0A1D5RLM8 5808 aa2.87□□□□□ -1.95
Col5a3-201ENSMUST00000004201 Gm10229O08631 77 aa2.86□□□□□ -1.95
Col5a3-201ENSMUST00000004201 Muc19Q6PZE0 7524 aa2.84□□□□□ -1.95
Col5a3-201ENSMUST00000004201 Phgr1Q8K0G7 91 aa2.84□□□□□ -1.96
Col5a3-201ENSMUST00000004201 Gm11568A2A4M2 211 aa2.75□□□□□ -1.97
Col5a3-201ENSMUST00000004201 Krtap9-1Q64526 186 aa2.75□□□□□ -1.97
Col5a3-201ENSMUST00000004201 Krtap5-2Q9D5Z7 189 aa2.5□□□□□ -2.01
Col5a3-201ENSMUST00000004201 Hmcn1D3YXG0 5634 aa2.49□□□□□ -2.01
Col5a3-201ENSMUST00000004201 Gm11567Q9D141 195 aa2.4□□□□□ -2.02
Col5a3-201ENSMUST00000004201 Gm4553A0A1B0GSA9 284 aa2.37□□□□□ -2.03
Col5a3-201ENSMUST00000004201 Krtap6-2O08884 159 aa2.27□□□□□ -2.05
Col5a3-201ENSMUST00000004201 Gm10153A0A1B0GRL1 320 aa2.25□□□□□ -2.05
Col5a3-201ENSMUST00000004201 A030005L19RikA0A1Y7VIU2 113 aa2.25□□□□□ -2.05
Col5a3-201ENSMUST00000004201 Gm2431E9Q8S1 172 aa2.25□□□□□ -2.05
Col5a3-201ENSMUST00000004201 AhnakE9Q616 5656 aaKnown RBP2.21□□□□□ -2.06
Col5a3-201ENSMUST00000004201 A0A1Y7VJH8 109 aa2.13□□□□□ -2.07
Col5a3-201ENSMUST00000004201 Gm45337A0A1B0GS71 263 aa2.1□□□□□ -2.07
Col5a3-201ENSMUST00000004201 Krtap21-1Q925H4 128 aa2.09□□□□□ -2.07
Col5a3-201ENSMUST00000004201 Gm40460A0A1B0GR10 244 aa2.06□□□□□ -2.08
Col5a3-201ENSMUST00000004201 Gm7579A0A1B0GRJ4 243 aa2.06□□□□□ -2.08
Col5a3-201ENSMUST00000004201 Krtap5-5Q2TA51 241 aa2.06□□□□□ -2.08
Col5a3-201ENSMUST00000004201 Krtap5-4Q62220 223 aa2.06□□□□□ -2.08
Col5a3-201ENSMUST00000004201 Gm39115A0A1B0GSH7 232 aa1.9□□□□□ -2.1
Col5a3-201ENSMUST00000004201 A0A1Y7VLE6 161 aa1.88□□□□□ -2.11
Col5a3-201ENSMUST00000004201 Gm45618A0A1B0GSA0 219 aa1.64□□□□□ -2.15
Col5a3-201ENSMUST00000004201 Gm29735A0A1B0GT06 219 aa1.56□□□□□ -2.16
Col5a3-201ENSMUST00000004201 Krtap5-1Q64507 230 aa1.32□□□□□ -2.2
Col5a3-201ENSMUST00000004201 A0A1Y7VJ07 166 aa1.17□□□□□ -2.22
Col5a3-201ENSMUST00000004201 A0A286YCP9 139 aa1.05□□□□□ -2.24
Col5a3-201ENSMUST00000004201 Gm4559A4IF42 199 aa0.83□□□□□ -2.28
Col5a3-201ENSMUST00000004201 Krtap28-13A0A087WQP5 138 aa0.73□□□□□ -2.29
Col5a3-201ENSMUST00000004201 A030003K21RikA0A1Y7VIM3 128 aa0.7□□□□□ -2.3
Col5a3-201ENSMUST00000004201 A030014E15RikA0A1Y7VJV2 120 aa0.65□□□□□ -2.31
Col5a3-201ENSMUST00000004201 Krtap28-10A0A1Y7VP58 119 aa0.51□□□□□ -2.33
Col5a3-201ENSMUST00000004201 Gm6217A0A1Y7VJK9 128 aa0.49□□□□□ -2.33
Col5a3-201ENSMUST00000004201 A030005K14RikA0A1Y7VNY1 122 aa0.48□□□□□ -2.33
Col5a3-201ENSMUST00000004201 Gm7544A0A1Y7VJ58 118 aa0.32□□□□□ -2.36
Retrieved 80 of 22,080 RNA–protein pairs in 23.8 ms