RNA–Protein interactions for RNA: ENSMUST00000113054.8

Shroom3-202, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-202ENSMUST00000113054 BsnO88737 3942 aa5.81□□□□□ -1.48
Shroom3-202ENSMUST00000113054 Vps13dB1ART2 4390 aa5.81□□□□□ -1.48
Shroom3-202ENSMUST00000113054 Stard9Q80TF6 4561 aa5.8□□□□□ -1.48
Shroom3-202ENSMUST00000113054 PlecQ9QXS1 4691 aaKnown RBP5.79□□□□□ -1.48
Shroom3-202ENSMUST00000113054 Xirp2Q4U4S6 3784 aa5.73□□□□□ -1.49
Shroom3-202ENSMUST00000113054 Lce3bQ9CQM7 98 aa5.72□□□□□ -1.49
Shroom3-202ENSMUST00000113054 Dnah11E9Q7N9 4488 aa5.69□□□□□ -1.5
Shroom3-202ENSMUST00000113054 Dnah17Q69Z23 4481 aa5.69□□□□□ -1.5
Shroom3-202ENSMUST00000113054 Krtap9-5A2A5X3 358 aa5.67□□□□□ -1.5
Shroom3-202ENSMUST00000113054 ApobE9Q414 4505 aa5.63□□□□□ -1.51
Shroom3-202ENSMUST00000113054 Dnah2P0C6F1 4456 aa5.63□□□□□ -1.51
Shroom3-202ENSMUST00000113054 2310046K23RikA0A0A6YVW6 87 aa5.62□□□□□ -1.51
Shroom3-202ENSMUST00000113054 Lce3cQ91V05 98 aa5.61□□□□□ -1.51
Shroom3-202ENSMUST00000113054 Gm38119A0A0A6YX29 146 aa5.6□□□□□ -1.51
Shroom3-202ENSMUST00000113054 Gm10272F7CZ33 110 aa5.58□□□□□ -1.52
Shroom3-202ENSMUST00000113054 Dync2h1Q45VK7 4306 aa5.55□□□□□ -1.52
Shroom3-202ENSMUST00000113054 SacsQ9JLC8 4582 aa5.52□□□□□ -1.53
Shroom3-202ENSMUST00000113054 Dnah9B1AR51 4484 aa5.51□□□□□ -1.53
Shroom3-202ENSMUST00000113054 Fat1A0A1L1SQU7 4645 aa5.5□□□□□ -1.53
Shroom3-202ENSMUST00000113054 Dnah7bL7N1Y0 4068 aa5.48□□□□□ -1.53
Shroom3-202ENSMUST00000113054 PrkdcP97313 4128 aa5.45□□□□□ -1.54
Shroom3-202ENSMUST00000113054 Krtap19-3Q925H6 87 aa5.45□□□□□ -1.54
Shroom3-202ENSMUST00000113054 Dnah1E9Q8T7 4250 aa5.45□□□□□ -1.54
Shroom3-202ENSMUST00000113054 Krtap16-3Q8C1I6 86 aa5.45□□□□□ -1.54
Shroom3-202ENSMUST00000113054 Kmt2aP55200 3966 aa5.45□□□□□ -1.54
Shroom3-202ENSMUST00000113054 Mycbp2Q7TPH6 4711 aa5.45□□□□□ -1.54
Shroom3-202ENSMUST00000113054 Dync1h1Q9JHU4 4644 aaKnown RBP5.44□□□□□ -1.54
Shroom3-202ENSMUST00000113054 Dnah6E9Q0B6 4144 aa5.44□□□□□ -1.54
Shroom3-202ENSMUST00000113054 TnxbO35452 4006 aa5.44□□□□□ -1.54
Shroom3-202ENSMUST00000113054 Sprr2iO70560 76 aa5.42□□□□□ -1.54
Shroom3-202ENSMUST00000113054 Lce3eF8VQJ0 98 aa5.41□□□□□ -1.54
Shroom3-202ENSMUST00000113054 Lce3fQ6PAI4 98 aa5.41□□□□□ -1.54
Shroom3-202ENSMUST00000113054 Gm10100J3QK64 120 aa5.41□□□□□ -1.54
Shroom3-202ENSMUST00000113054 Lce1jD3YUU5 139 aa5.38□□□□□ -1.55
Shroom3-202ENSMUST00000113054 Lce1gQ9D195 139 aa5.38□□□□□ -1.55
Shroom3-202ENSMUST00000113054 Lce1iQ9D6P5 149 aa5.38□□□□□ -1.55
Shroom3-202ENSMUST00000113054 Lce1hQ9D6R3 140 aa5.38□□□□□ -1.55
Shroom3-202ENSMUST00000113054 Dnah3Q8BW94 4083 aa5.37□□□□□ -1.55
Shroom3-202ENSMUST00000113054 Lce3dE9Q8V1 98 aa5.36□□□□□ -1.55
Shroom3-202ENSMUST00000113054 Lrp1bQ9JI18 4599 aa5.35□□□□□ -1.55
Shroom3-202ENSMUST00000113054 Ryr1E9PZQ0 5035 aa5.33□□□□□ -1.56
Shroom3-202ENSMUST00000113054 Prm1P02319 51 aa5.29□□□□□ -1.56
Shroom3-202ENSMUST00000113054 Mt2P02798 61 aa5.28□□□□□ -1.56
Shroom3-202ENSMUST00000113054 Pkd1O08852 4293 aa5.28□□□□□ -1.56
Shroom3-202ENSMUST00000113054 Krtap22-2J3QNX6 67 aa5.27□□□□□ -1.57
Shroom3-202ENSMUST00000113054 Gm10142J3KMP7 120 aa5.25□□□□□ -1.57
Shroom3-202ENSMUST00000113054 Lce3aQ497I5 98 aa5.25□□□□□ -1.57
Shroom3-202ENSMUST00000113054 Krtap19-1Q925H2 87 aa5.22□□□□□ -1.57
Shroom3-202ENSMUST00000113054 Sprr2fO70557 76 aa5.19□□□□□ -1.58
Shroom3-202ENSMUST00000113054 Vps13bQ80TY5 3993 aa5.16□□□□□ -1.58
Shroom3-202ENSMUST00000113054 Fat3Q8BNA6 4555 aa5.15□□□□□ -1.58
Shroom3-202ENSMUST00000113054 Lce1bQ9D149 137 aa5.15□□□□□ -1.59
Shroom3-202ENSMUST00000113054 Lce1fB9EJP6 147 aa5.14□□□□□ -1.59
Shroom3-202ENSMUST00000113054 Lce1cQ9D1C5 147 aa5.14□□□□□ -1.59
Shroom3-202ENSMUST00000113054 Lce1lQ9D1G7 135 aa5.14□□□□□ -1.59
Shroom3-202ENSMUST00000113054 Lce1dQ9D731 133 aa5.14□□□□□ -1.59
Shroom3-202ENSMUST00000113054 Krtap1-3A2A588 173 aa5.13□□□□□ -1.59
Shroom3-202ENSMUST00000113054 Fras1Q80T14 4010 aa5.12□□□□□ -1.59
Shroom3-202ENSMUST00000113054 Gm7735D3YX18 52 aa5.11□□□□□ -1.59
Shroom3-202ENSMUST00000113054 Krtap19-2Q925I0 141 aa5.1□□□□□ -1.59
Shroom3-202ENSMUST00000113054 Hectd4E9Q2E4 4418 aa5.09□□□□□ -1.59
Shroom3-202ENSMUST00000113054 Lrp1Q91ZX7 4545 aaKnown RBP5.09□□□□□ -1.59
Shroom3-202ENSMUST00000113054 Dnah7cA0A087WR13 4024 aa5.08□□□□□ -1.6
Shroom3-202ENSMUST00000113054 Dnah8Q91XQ0 4731 aa5.08□□□□□ -1.6
Shroom3-202ENSMUST00000113054 Sprr2eO70556 76 aa5.07□□□□□ -1.6
Shroom3-202ENSMUST00000113054 Gm11569B1AQB1 180 aa5.04□□□□□ -1.6
Shroom3-202ENSMUST00000113054 Dnah7aE9Q0T8 4024 aa5.03□□□□□ -1.6
Shroom3-202ENSMUST00000113054 Lce1eQ9D139 143 aa5.02□□□□□ -1.61
Shroom3-202ENSMUST00000113054 Dnhd1D3Z2X2 4750 aa5.01□□□□□ -1.61
Shroom3-202ENSMUST00000113054 Gm10024A0A0A0MQA4 119 aa5.01□□□□□ -1.61
Shroom3-202ENSMUST00000113054 Mt4P47945 62 aa5□□□□□ -1.61
Shroom3-202ENSMUST00000113054 Fat2Q5F226 4351 aa4.98□□□□□ -1.61
Shroom3-202ENSMUST00000113054 Gm9789Q8BIG3 52 aa4.97□□□□□ -1.61
Shroom3-202ENSMUST00000113054 Gm10061D3Z714 54 aa4.95□□□□□ -1.62
Shroom3-202ENSMUST00000113054 Krtap4-2B1AQ85 167 aa4.92□□□□□ -1.62
Shroom3-202ENSMUST00000113054 Lrp2A2ARV4 4660 aa4.91□□□□□ -1.62
Shroom3-202ENSMUST00000113054 Ryr3A2AGL3 4863 aa4.91□□□□□ -1.62
Shroom3-202ENSMUST00000113054 Krtap4-6Q3V4B7 195 aa4.85□□□□□ -1.63
Shroom3-202ENSMUST00000113054 Herc2Q4U2R1 4836 aa4.78□□□□□ -1.64
Shroom3-202ENSMUST00000113054 Pkhd1E9PZ36 4059 aa4.78□□□□□ -1.64
Shroom3-202ENSMUST00000113054 Ryr2E9Q401 4966 aaKnown RBP4.74□□□□□ -1.65
Shroom3-202ENSMUST00000113054 Krtap19-4Q925H7 84 aa4.74□□□□□ -1.65
Shroom3-202ENSMUST00000113054 HydinQ80W93 5154 aa4.73□□□□□ -1.65
Shroom3-202ENSMUST00000113054 Kmt2cQ8BRH4 4903 aa4.73□□□□□ -1.65
Shroom3-202ENSMUST00000113054 Krtap9-3Q3V2C1 136 aa4.68□□□□□ -1.66
Shroom3-202ENSMUST00000113054 PcloQ9QYX7 5068 aa4.67□□□□□ -1.66
Shroom3-202ENSMUST00000113054 Krtap4-1Q3UUY3 169 aa4.61□□□□□ -1.67
Shroom3-202ENSMUST00000113054 Herc1E9PZP8 4859 aa4.61□□□□□ -1.67
Shroom3-202ENSMUST00000113054 Kiaa1109A2AAE1 5005 aa4.6□□□□□ -1.67
Shroom3-202ENSMUST00000113054 2300003K06RikA2A4M0 262 aa4.55□□□□□ -1.68
Shroom3-202ENSMUST00000113054 Gm11596B1AQB0 205 aa4.54□□□□□ -1.68
Shroom3-202ENSMUST00000113054 Lce1a2Q9D1K4 149 aa4.53□□□□□ -1.68
Shroom3-202ENSMUST00000113054 Gm11564A2A4L9 201 aa4.5□□□□□ -1.69
Shroom3-202ENSMUST00000113054 Gm11563B1AQ90 168 aa4.5□□□□□ -1.69
Shroom3-202ENSMUST00000113054 Gm11595B1AQA7 289 aa4.5□□□□□ -1.69
Shroom3-202ENSMUST00000113054 Krtap4-8B1AQA8 209 aa4.5□□□□□ -1.69
Shroom3-202ENSMUST00000113054 Pkhd1l1Q80ZA4 4249 aa4.49□□□□□ -1.69
Shroom3-202ENSMUST00000113054 Krtap4-7Q9D732 168 aa4.48□□□□□ -1.69
Shroom3-202ENSMUST00000113054 Krtap4-9B1AQA9 244 aa4.48□□□□□ -1.69
Shroom3-202ENSMUST00000113054 Krtap4-13Q9D7P3 165 aa4.42□□□□□ -1.7
Retrieved 100 of 22,080 RNA–protein pairs in 8.1 ms