RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Krtap12-1Q9Z287 130 aa3.98□□□□□ -1.77
Syne1-201ENSMUST00000041639 PlecQ9QXS1 4691 aaKnown RBP3.97□□□□□ -1.77
Syne1-201ENSMUST00000041639 Kmt2aP55200 3966 aa3.96□□□□□ -1.78
Syne1-201ENSMUST00000041639 Sprr2kO70562 68 aa3.96□□□□□ -1.78
Syne1-201ENSMUST00000041639 Dnah17Q69Z23 4481 aa3.94□□□□□ -1.78
Syne1-201ENSMUST00000041639 Dnah11E9Q7N9 4488 aa3.92□□□□□ -1.78
Syne1-201ENSMUST00000041639 Dnah7bL7N1Y0 4068 aa3.92□□□□□ -1.78
Syne1-201ENSMUST00000041639 Dnah6E9Q0B6 4144 aa3.91□□□□□ -1.78
Syne1-201ENSMUST00000041639 Dnah3Q8BW94 4083 aa3.89□□□□□ -1.79
Syne1-201ENSMUST00000041639 Dnah2P0C6F1 4456 aa3.88□□□□□ -1.79
Syne1-201ENSMUST00000041639 Dnah9B1AR51 4484 aa3.85□□□□□ -1.79
Syne1-201ENSMUST00000041639 ApobE9Q414 4505 aa3.84□□□□□ -1.8
Syne1-201ENSMUST00000041639 Mycbp2Q7TPH6 4711 aa3.83□□□□□ -1.8
Syne1-201ENSMUST00000041639 TnxbO35452 4006 aa3.83□□□□□ -1.8
Syne1-201ENSMUST00000041639 PrkdcP97313 4128 aa3.82□□□□□ -1.8
Syne1-201ENSMUST00000041639 SacsQ9JLC8 4582 aa3.82□□□□□ -1.8
Syne1-201ENSMUST00000041639 Dync2h1Q45VK7 4306 aa3.81□□□□□ -1.8
Syne1-201ENSMUST00000041639 Fras1Q80T14 4010 aa3.76□□□□□ -1.81
Syne1-201ENSMUST00000041639 Vps13bQ80TY5 3993 aa3.73□□□□□ -1.81
Syne1-201ENSMUST00000041639 Lce1mQ9CR91 182 aa3.72□□□□□ -1.81
Syne1-201ENSMUST00000041639 Lrp1bQ9JI18 4599 aa3.72□□□□□ -1.81
Syne1-201ENSMUST00000041639 Dnah1E9Q8T7 4250 aa3.72□□□□□ -1.81
Syne1-201ENSMUST00000041639 Sprr2gO70558 76 aa3.72□□□□□ -1.81
Syne1-201ENSMUST00000041639 Krtap9-5A2A5X3 358 aa3.71□□□□□ -1.82
Syne1-201ENSMUST00000041639 Krtap16-3Q8C1I6 86 aa3.71□□□□□ -1.82
Syne1-201ENSMUST00000041639 Fat1A0A1L1SQU7 4645 aa3.71□□□□□ -1.82
Syne1-201ENSMUST00000041639 Krtap19-3Q925H6 87 aa3.69□□□□□ -1.82
Syne1-201ENSMUST00000041639 Lrp1Q91ZX7 4545 aaKnown RBP3.68□□□□□ -1.82
Syne1-201ENSMUST00000041639 Ryr1E9PZQ0 5035 aa3.68□□□□□ -1.82
Syne1-201ENSMUST00000041639 Dync1h1Q9JHU4 4644 aaKnown RBP3.67□□□□□ -1.82
Syne1-201ENSMUST00000041639 Gm10100J3QK64 120 aa3.67□□□□□ -1.82
Syne1-201ENSMUST00000041639 Lce3bQ9CQM7 98 aa3.67□□□□□ -1.82
Syne1-201ENSMUST00000041639 Gm10272F7CZ33 110 aa3.66□□□□□ -1.82
Syne1-201ENSMUST00000041639 Lce3cQ91V05 98 aa3.65□□□□□ -1.82
Syne1-201ENSMUST00000041639 Dnah7cA0A087WR13 4024 aa3.64□□□□□ -1.83
Syne1-201ENSMUST00000041639 Dnah7aE9Q0T8 4024 aa3.64□□□□□ -1.83
Syne1-201ENSMUST00000041639 Fat3Q8BNA6 4555 aa3.64□□□□□ -1.83
Syne1-201ENSMUST00000041639 Hectd4E9Q2E4 4418 aa3.64□□□□□ -1.83
Syne1-201ENSMUST00000041639 Krtap19-1Q925H2 87 aa3.6□□□□□ -1.83
Syne1-201ENSMUST00000041639 Dnah8Q91XQ0 4731 aa3.58□□□□□ -1.84
Syne1-201ENSMUST00000041639 Gm10142J3KMP7 120 aa3.55□□□□□ -1.84
Syne1-201ENSMUST00000041639 Lce3eF8VQJ0 98 aa3.54□□□□□ -1.84
Syne1-201ENSMUST00000041639 Lce3fQ6PAI4 98 aa3.54□□□□□ -1.84
Syne1-201ENSMUST00000041639 2310046K23RikA0A0A6YVW6 87 aa3.53□□□□□ -1.84
Syne1-201ENSMUST00000041639 Mt2P02798 61 aa3.53□□□□□ -1.84
Syne1-201ENSMUST00000041639 Pkd1O08852 4293 aa3.52□□□□□ -1.85
Syne1-201ENSMUST00000041639 Krtap22-2J3QNX6 67 aa3.51□□□□□ -1.85
Syne1-201ENSMUST00000041639 Lrp2A2ARV4 4660 aa3.48□□□□□ -1.85
Syne1-201ENSMUST00000041639 Lce3dE9Q8V1 98 aa3.47□□□□□ -1.85
Syne1-201ENSMUST00000041639 Gm38119A0A0A6YX29 146 aa3.45□□□□□ -1.86
Syne1-201ENSMUST00000041639 Prm1P02319 51 aa3.44□□□□□ -1.86
Syne1-201ENSMUST00000041639 Krtap19-2Q925I0 141 aa3.43□□□□□ -1.86
Syne1-201ENSMUST00000041639 Lce3aQ497I5 98 aa3.43□□□□□ -1.86
Syne1-201ENSMUST00000041639 Lce1jD3YUU5 139 aa3.41□□□□□ -1.86
Syne1-201ENSMUST00000041639 Fat2Q5F226 4351 aa3.4□□□□□ -1.87
Syne1-201ENSMUST00000041639 Ryr3A2AGL3 4863 aa3.39□□□□□ -1.87
Syne1-201ENSMUST00000041639 Krtap1-3A2A588 173 aa3.39□□□□□ -1.87
Syne1-201ENSMUST00000041639 HydinQ80W93 5154 aa3.39□□□□□ -1.87
Syne1-201ENSMUST00000041639 Lce1gQ9D195 139 aa3.39□□□□□ -1.87
Syne1-201ENSMUST00000041639 Lce1iQ9D6P5 149 aa3.39□□□□□ -1.87
Syne1-201ENSMUST00000041639 Lce1hQ9D6R3 140 aa3.39□□□□□ -1.87
Syne1-201ENSMUST00000041639 Sprr2iO70560 76 aa3.38□□□□□ -1.87
Syne1-201ENSMUST00000041639 Pkhd1E9PZ36 4059 aa3.36□□□□□ -1.87
Syne1-201ENSMUST00000041639 Kmt2cQ8BRH4 4903 aa3.34□□□□□ -1.88
Syne1-201ENSMUST00000041639 A0A1Y7VLE6 161 aa3.33□□□□□ -1.88
Syne1-201ENSMUST00000041639 Gm7735D3YX18 52 aa3.33□□□□□ -1.88
Syne1-201ENSMUST00000041639 Herc2Q4U2R1 4836 aa3.32□□□□□ -1.88
Syne1-201ENSMUST00000041639 Dnhd1D3Z2X2 4750 aa3.31□□□□□ -1.88
Syne1-201ENSMUST00000041639 Kiaa1109A2AAE1 5005 aa3.29□□□□□ -1.88
Syne1-201ENSMUST00000041639 Lce1fB9EJP6 147 aa3.29□□□□□ -1.88
Syne1-201ENSMUST00000041639 Lce1cQ9D1C5 147 aa3.29□□□□□ -1.88
Syne1-201ENSMUST00000041639 Lce1lQ9D1G7 135 aa3.29□□□□□ -1.88
Syne1-201ENSMUST00000041639 Lce1dQ9D731 133 aa3.29□□□□□ -1.88
Syne1-201ENSMUST00000041639 Lce1bQ9D149 137 aa3.28□□□□□ -1.88
Syne1-201ENSMUST00000041639 Gm10024A0A0A0MQA4 119 aa3.26□□□□□ -1.89
Syne1-201ENSMUST00000041639 Pkhd1l1Q80ZA4 4249 aa3.26□□□□□ -1.89
Syne1-201ENSMUST00000041639 Syne1Q6ZWR6 8799 aa3.26□□□□□ -1.89
Syne1-201ENSMUST00000041639 Ryr2E9Q401 4966 aaKnown RBP3.25□□□□□ -1.89
Syne1-201ENSMUST00000041639 Krtap9-3Q3V2C1 136 aa3.24□□□□□ -1.89
Syne1-201ENSMUST00000041639 Gm9789Q8BIG3 52 aa3.24□□□□□ -1.89
Syne1-201ENSMUST00000041639 Lce1eQ9D139 143 aa3.24□□□□□ -1.89
Syne1-201ENSMUST00000041639 PcloQ9QYX7 5068 aa3.24□□□□□ -1.89
Syne1-201ENSMUST00000041639 Sprr2eO70556 76 aa3.22□□□□□ -1.89
Syne1-201ENSMUST00000041639 Gm10061D3Z714 54 aa3.21□□□□□ -1.9
Syne1-201ENSMUST00000041639 Krtap19-4Q925H7 84 aa3.16□□□□□ -1.9
Syne1-201ENSMUST00000041639 Gm11569B1AQB1 180 aa3.16□□□□□ -1.9
Syne1-201ENSMUST00000041639 Sprr2fO70557 76 aa3.12□□□□□ -1.91
Syne1-201ENSMUST00000041639 Mdn1A2ANY6 5589 aaKnown RBP3.12□□□□□ -1.91
Syne1-201ENSMUST00000041639 Mt4P47945 62 aa3.09□□□□□ -1.92
Syne1-201ENSMUST00000041639 Lce1a2Q9D1K4 149 aa3.07□□□□□ -1.92
Syne1-201ENSMUST00000041639 Abca13Q5SSE9 5034 aa3.04□□□□□ -1.92
Syne1-201ENSMUST00000041639 Krtap4-6Q3V4B7 195 aa3.01□□□□□ -1.93
Syne1-201ENSMUST00000041639 A030003K21RikA0A1Y7VIM3 128 aa3□□□□□ -1.93
Syne1-201ENSMUST00000041639 Birc6O88738 4882 aa3□□□□□ -1.93
Syne1-201ENSMUST00000041639 Herc1E9PZP8 4859 aa2.98□□□□□ -1.93
Syne1-201ENSMUST00000041639 Krtap4-2B1AQ85 167 aa2.97□□□□□ -1.93
Syne1-201ENSMUST00000041639 Ubr4A2AN08 5180 aa2.95□□□□□ -1.94
Syne1-201ENSMUST00000041639 Krtap31-1Q9D644 177 aa2.94□□□□□ -1.94
Syne1-201ENSMUST00000041639 Krtap28-10A0A1Y7VP58 119 aa2.92□□□□□ -1.94
Syne1-201ENSMUST00000041639 Krtap17-1A2A5X6 109 aa2.92□□□□□ -1.94
Retrieved 100 of 22,080 RNA–protein pairs in 81.1 ms