RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W BRE4Q07660 1125 aa3.72□□□□□ -1.81
SPT6YGR116W MYO1P08964 1928 aa3.72□□□□□ -1.81
SPT6YGR116W TEF1P02994 458 aaKnown RBP3.72□□□□□ -1.81
SPT6YGR116W HIR2P32480 875 aa3.72□□□□□ -1.81
SPT6YGR116W AEP1P32493 518 aa3.72□□□□□ -1.81
SPT6YGR116W YSC84P32793 468 aa3.72□□□□□ -1.81
SPT6YGR116W MAE1P36013 669 aaKnown RBP3.72□□□□□ -1.81
SPT6YGR116W MUM2P38236 366 aa3.72□□□□□ -1.81
SPT6YGR116W OTU2P38747 307 aaKnown RBP3.72□□□□□ -1.81
SPT6YGR116W NPP2P39997 493 aa3.72□□□□□ -1.81
SPT6YGR116W AZR1P50080 613 aa3.72□□□□□ -1.81
SPT6YGR116W YNL108CP53929 270 aa3.72□□□□□ -1.81
SPT6YGR116W VPS9P54787 451 aa3.72□□□□□ -1.81
SPT6YGR116W RSC9Q03124 581 aa3.72□□□□□ -1.81
SPT6YGR116W SKG3Q06315 1026 aa3.72□□□□□ -1.81
SPT6YGR116W MDM36Q06820 579 aa3.72□□□□□ -1.81
SPT6YGR116W YLL056CQ12177 298 aa3.72□□□□□ -1.81
SPT6YGR116W TPK2P06245 380 aa3.72□□□□□ -1.81
SPT6YGR116W BUD31P25337 157 aaPredicted RBP3.72□□□□□ -1.81
SPT6YGR116W GBP2P25555 427 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
SPT6YGR116W CYS4P32582 507 aaKnown RBP3.72□□□□□ -1.81
SPT6YGR116W GDA1P32621 518 aa3.72□□□□□ -1.81
SPT6YGR116W CYM1P32898 989 aa3.72□□□□□ -1.81
SPT6YGR116W TOM20P35180 183 aa3.72□□□□□ -1.81
SPT6YGR116W YKR075CP36155 307 aa3.72□□□□□ -1.81
SPT6YGR116W RDH54P38086 958 aa3.72□□□□□ -1.81
SPT6YGR116W YBR285WP38354 144 aa3.72□□□□□ -1.81
SPT6YGR116W JLP2P40206 208 aa3.72□□□□□ -1.81
SPT6YGR116W AGP3P43548 558 aa3.72□□□□□ -1.81
SPT6YGR116W CPR7P47103 393 aa3.72□□□□□ -1.81
SPT6YGR116W HAM1P47119 197 aaKnown RBP3.72□□□□□ -1.81
SPT6YGR116W YNL095CP53932 642 aa3.72□□□□□ -1.81
SPT6YGR116W ORC4P54791 529 aa3.72□□□□□ -1.81
SPT6YGR116W SND1Q04007 877 aa3.72□□□□□ -1.81
SPT6YGR116W RGC1Q06108 1083 aaKnown RBP3.72□□□□□ -1.81
SPT6YGR116W YPR196WQ06595 470 aa3.72□□□□□ -1.81
SPT6YGR116W RCN2Q12044 265 aa3.72□□□□□ -1.81
SPT6YGR116W HOS1Q12214 470 aa3.72□□□□□ -1.81
SPT6YGR116W MET17P06106 444 aa3.72□□□□□ -1.81
SPT6YGR116W PMA2P19657 947 aa3.72□□□□□ -1.81
SPT6YGR116W TRX1P22217 103 aaKnown RBP3.72□□□□□ -1.81
SPT6YGR116W SEC15P22224 910 aa3.72□□□□□ -1.81
SPT6YGR116W TSR4P25040 408 aa3.72□□□□□ -1.81
SPT6YGR116W HRR25P29295 494 aaKnown RBP3.72□□□□□ -1.81
SPT6YGR116W KDX1P36005 433 aa3.72□□□□□ -1.81
SPT6YGR116W NAT2P37293 288 aa3.72□□□□□ -1.81
SPT6YGR116W YRO2P38079 344 aa3.72□□□□□ -1.81
SPT6YGR116W YBR139WP38109 508 aa3.72□□□□□ -1.81
SPT6YGR116W CST26P38226 397 aa3.72□□□□□ -1.81
SPT6YGR116W YLF2P38746 405 aa3.72□□□□□ -1.81
SPT6YGR116W MPT5P39016 859 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
SPT6YGR116W ALD5P40047 520 aaKnown RBP3.72□□□□□ -1.81
SPT6YGR116W DSE1P40077 573 aa3.72□□□□□ -1.81
SPT6YGR116W YJR098CP47139 656 aa3.72□□□□□ -1.81
SPT6YGR116W SAP4P53036 818 aa3.72□□□□□ -1.81
SPT6YGR116W TEP1P53916 434 aa3.72□□□□□ -1.81
SPT6YGR116W YNL010WP53981 241 aaKnown RBP3.72□□□□□ -1.81
SPT6YGR116W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
SPT6YGR116W HSP31Q04432 237 aa3.72□□□□□ -1.81
SPT6YGR116W THP3Q12049 470 aaKnown RBP3.72□□□□□ -1.81
SPT6YGR116W DCP1Q12517 231 aaPredicted RBP3.72□□□□□ -1.81
SPT6YGR116W FIG2P25653 1609 aa3.71□□□□□ -1.81
SPT6YGR116W RAD10P06838 210 aa3.71□□□□□ -1.82
SPT6YGR116W POL4P25615 582 aa3.71□□□□□ -1.82
SPT6YGR116W SUV3P32580 737 aa3.71□□□□□ -1.82
SPT6YGR116W UGP1P32861 499 aaKnown RBP3.71□□□□□ -1.82
SPT6YGR116W YJL070CP40361 888 aa3.71□□□□□ -1.82
SPT6YGR116W DAN4P47179 1161 aa3.71□□□□□ -1.82
SPT6YGR116W ATP22P50273 684 aaPredicted RBP3.71□□□□□ -1.82
SPT6YGR116W RPL6AQ02326 176 aaKnown RBP3.71□□□□□ -1.82
SPT6YGR116W ISU1Q03020 165 aa3.71□□□□□ -1.82
SPT6YGR116W RSN1Q03516 953 aa3.71□□□□□ -1.82
SPT6YGR116W YMR209CQ03648 457 aa3.71□□□□□ -1.82
SPT6YGR116W PHM6Q05637 104 aa3.71□□□□□ -1.82
SPT6YGR116W ACK1Q07622 623 aaPredicted RBP3.71□□□□□ -1.82
SPT6YGR116W YLR031WQ07978 186 aa3.71□□□□□ -1.82
SPT6YGR116W GRX6Q12438 231 aa3.71□□□□□ -1.82
SPT6YGR116W NSI1Q12457 570 aa3.71□□□□□ -1.82
SPT6YGR116W VPS5Q92331 675 aa3.71□□□□□ -1.82
SPT6YGR116W TPK3P05986 398 aa3.71□□□□□ -1.82
SPT6YGR116W GPH1P06738 902 aaKnown RBP3.71□□□□□ -1.82
SPT6YGR116W MCM1P11746 286 aa3.71□□□□□ -1.82
SPT6YGR116W EST1P17214 699 aaPredicted RBP3.71□□□□□ -1.82
SPT6YGR116W KIN3P22209 435 aa3.71□□□□□ -1.82
SPT6YGR116W PRP21P32524 280 aaPredicted RBP3.71□□□□□ -1.82
SPT6YGR116W BCS1P32839 456 aa3.71□□□□□ -1.82
SPT6YGR116W GDH2P33327 1092 aaKnown RBP3.71□□□□□ -1.82
SPT6YGR116W SPC34P36131 295 aa3.71□□□□□ -1.82
SPT6YGR116W YBR241CP38142 488 aa3.71□□□□□ -1.82
SPT6YGR116W TDP1P38319 544 aa3.71□□□□□ -1.82
SPT6YGR116W CBR1P38626 284 aaKnown RBP3.71□□□□□ -1.82
SPT6YGR116W ARN1P38731 627 aa3.71□□□□□ -1.82
SPT6YGR116W MTG2P38860 518 aa3.71□□□□□ -1.82
SPT6YGR116W FLC2P39719 783 aa3.71□□□□□ -1.82
SPT6YGR116W KRE29P40026 464 aa3.71□□□□□ -1.82
SPT6YGR116W FIS1P40515 155 aa3.71□□□□□ -1.82
SPT6YGR116W YRB2P40517 327 aa3.71□□□□□ -1.82
SPT6YGR116W VHR1P40522 640 aa3.71□□□□□ -1.82
SPT6YGR116W REF2P42073 533 aaPredicted RBP3.71□□□□□ -1.82
SPT6YGR116W MSE1P48525 536 aa3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 215 ms