RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 SALL1Q9NSC2 1324 aa9.78□□□□□ -0.84
PHGDH-217ENST00000641455 LAMA2P24043 3122 aaKnown RBP9.78□□□□□ -0.84
PHGDH-217ENST00000641455 EYA2O00167 538 aa9.77□□□□□ -0.85
PHGDH-217ENST00000641455 GLRX3O76003 335 aaKnown RBP9.77□□□□□ -0.85
PHGDH-217ENST00000641455 HOXD11P31277 338 aaPredicted RBP9.77□□□□□ -0.85
PHGDH-217ENST00000641455 PHKA1P46020 1223 aa9.77□□□□□ -0.85
PHGDH-217ENST00000641455 ATP2B2Q01814 1243 aa9.77□□□□□ -0.85
PHGDH-217ENST00000641455 Q3C1V9 767 aa9.77□□□□□ -0.85
PHGDH-217ENST00000641455 SLC39A5Q6ZMH5 540 aa9.77□□□□□ -0.85
PHGDH-217ENST00000641455 ATXN2LQ8WWM7 1075 aaKnown RBP9.77□□□□□ -0.85
PHGDH-217ENST00000641455 USP6NLQ92738 828 aa9.77□□□□□ -0.85
PHGDH-217ENST00000641455 EDC3Q96F86 508 aaKnown RBP9.77□□□□□ -0.85
PHGDH-217ENST00000641455 GAS2L1Q99501 681 aaPredicted RBP9.77□□□□□ -0.85
PHGDH-217ENST00000641455 PDLIM7Q9NR12 457 aa9.77□□□□□ -0.85
PHGDH-217ENST00000641455 RBPJLQ9UBG7 517 aa9.77□□□□□ -0.85
PHGDH-217ENST00000641455 SEMA3EO15041 775 aa9.76□□□□□ -0.85
PHGDH-217ENST00000641455 DNAJB2P25686 324 aa9.76□□□□□ -0.85
PHGDH-217ENST00000641455 HOXA7P31268 230 aaPredicted RBP9.76□□□□□ -0.85
PHGDH-217ENST00000641455 CYP2C19P33261 490 aa9.76□□□□□ -0.85
PHGDH-217ENST00000641455 BACE1P56817 501 aa9.76□□□□□ -0.85
PHGDH-217ENST00000641455 RRP1BQ14684 758 aaKnown RBP9.76□□□□□ -0.85
PHGDH-217ENST00000641455 CCDC27Q2M243 656 aa9.76□□□□□ -0.85
PHGDH-217ENST00000641455 ANO1Q5XXA6 986 aa9.76□□□□□ -0.85
PHGDH-217ENST00000641455 SH3RF1Q7Z6J0 888 aa9.76□□□□□ -0.85
PHGDH-217ENST00000641455 ARRDC4Q8NCT1 418 aa9.76□□□□□ -0.85
PHGDH-217ENST00000641455 GTF3C2Q8WUA4 911 aaPredicted RBP9.76□□□□□ -0.85
PHGDH-217ENST00000641455 ASB2Q96Q27 587 aa9.76□□□□□ -0.85
PHGDH-217ENST00000641455 SIL1Q9H173 461 aa9.76□□□□□ -0.85
PHGDH-217ENST00000641455 ZNF576Q9H609 170 aa9.76□□□□□ -0.85
PHGDH-217ENST00000641455 FLRT1Q9NZU1 646 aa9.76□□□□□ -0.85
PHGDH-217ENST00000641455 IVNS1ABPQ9Y6Y0 642 aa9.76□□□□□ -0.85
PHGDH-217ENST00000641455 MROH7-TTC4A0A0A0MT08 1334 aa9.76□□□□□ -0.85
PHGDH-217ENST00000641455 UTYO14607 1347 aa9.76□□□□□ -0.85
PHGDH-217ENST00000641455 RLFQ13129 1914 aa9.76□□□□□ -0.85
PHGDH-217ENST00000641455 MYO9BQ13459 2157 aa9.75□□□□□ -0.85
PHGDH-217ENST00000641455 TRIM43BA6NCK2 446 aa9.75□□□□□ -0.85
PHGDH-217ENST00000641455 CCNA1P78396 465 aa9.75□□□□□ -0.85
PHGDH-217ENST00000641455 MRPS5P82675 430 aaKnown RBP9.75□□□□□ -0.85
PHGDH-217ENST00000641455 CCDC85BQ15834 202 aaPredicted RBP9.75□□□□□ -0.85
PHGDH-217ENST00000641455 SPTY2D1Q68D10 685 aaPredicted RBP9.75□□□□□ -0.85
PHGDH-217ENST00000641455 FERMT2Q96AC1 680 aa9.75□□□□□ -0.85
PHGDH-217ENST00000641455 TRIM43Q96BQ3 446 aaPredicted RBP9.75□□□□□ -0.85
PHGDH-217ENST00000641455 TIFAQ96CG3 184 aa9.75□□□□□ -0.85
PHGDH-217ENST00000641455 WDR18Q9BV38 432 aa9.75□□□□□ -0.85
PHGDH-217ENST00000641455 TRIM34Q9BYJ4 488 aa9.75□□□□□ -0.85
PHGDH-217ENST00000641455 CEP126Q9P2H0 1117 aa9.75□□□□□ -0.85
PHGDH-217ENST00000641455 HCN4Q9Y3Q4 1203 aa9.75□□□□□ -0.85
PHGDH-217ENST00000641455 SALL2Q9Y467 1007 aaPredicted RBP9.75□□□□□ -0.85
PHGDH-217ENST00000641455 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.74□□□□□ -0.85
PHGDH-217ENST00000641455 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.74□□□□□ -0.85
PHGDH-217ENST00000641455 C19orf81C9J6K1 198 aa9.74□□□□□ -0.85
PHGDH-217ENST00000641455 USP17L10C9JJH3 530 aa9.74□□□□□ -0.85
PHGDH-217ENST00000641455 ASNSP08243 561 aa9.74□□□□□ -0.85
PHGDH-217ENST00000641455 ADCYAP1R1P41586 468 aa9.74□□□□□ -0.85
PHGDH-217ENST00000641455 RHBDL3P58872 404 aa9.74□□□□□ -0.85
PHGDH-217ENST00000641455 CCDC129Q6ZRS4 1044 aa9.74□□□□□ -0.85
PHGDH-217ENST00000641455 ERICH6Q7L0X2 663 aa9.74□□□□□ -0.85
PHGDH-217ENST00000641455 C1QTNF1Q9BXJ1 281 aa9.74□□□□□ -0.85
PHGDH-217ENST00000641455 HERC5Q9UII4 1024 aaKnown RBP9.74□□□□□ -0.85
PHGDH-217ENST00000641455 NCOR1O75376 2440 aa9.74□□□□□ -0.85
PHGDH-217ENST00000641455 GPR75-ASB3A0A0A6YYF3 556 aa9.73□□□□□ -0.85
PHGDH-217ENST00000641455 SLC15A5A6NIM6 579 aa9.73□□□□□ -0.85
PHGDH-217ENST00000641455 GDF11O95390 407 aa9.73□□□□□ -0.85
PHGDH-217ENST00000641455 RAG1P15918 1043 aa9.73□□□□□ -0.85
PHGDH-217ENST00000641455 IGFBP4P22692 258 aa9.73□□□□□ -0.85
PHGDH-217ENST00000641455 PTPREP23469 700 aa9.73□□□□□ -0.85
PHGDH-217ENST00000641455 ADORA1P30542 326 aa9.73□□□□□ -0.85
PHGDH-217ENST00000641455 EPHB4P54760 987 aa9.73□□□□□ -0.85
PHGDH-217ENST00000641455 MECOMQ03112 1051 aa9.73□□□□□ -0.85
PHGDH-217ENST00000641455 TLE2Q04725 743 aa9.73□□□□□ -0.85
PHGDH-217ENST00000641455 FPGSQ05932 587 aa9.73□□□□□ -0.85
PHGDH-217ENST00000641455 RASGRF1Q13972 1273 aa9.73□□□□□ -0.85
PHGDH-217ENST00000641455 ZYXQ15942 572 aaKnown RBP9.73□□□□□ -0.85
PHGDH-217ENST00000641455 CCDC102BQ68D86 513 aa9.73□□□□□ -0.85
PHGDH-217ENST00000641455 POTEEQ6S8J3 1075 aa9.73□□□□□ -0.85
PHGDH-217ENST00000641455 TEX11Q8IYF3 940 aa9.73□□□□□ -0.85
PHGDH-217ENST00000641455 CRACR2BQ8N4Y2 399 aaPredicted RBP9.73□□□□□ -0.85
PHGDH-217ENST00000641455 TRPV1Q8NER1 839 aa9.73□□□□□ -0.85
PHGDH-217ENST00000641455 NPLOC4Q8TAT6 608 aa9.73□□□□□ -0.85
PHGDH-217ENST00000641455 FAM163AQ96GL9 167 aaPredicted RBP9.73□□□□□ -0.85
PHGDH-217ENST00000641455 FEZ1Q99689 392 aa9.73□□□□□ -0.85
PHGDH-217ENST00000641455 PRDM12Q9H4Q4 367 aa9.73□□□□□ -0.85
PHGDH-217ENST00000641455 PRKRIP1Q9H875 184 aaPredicted RBP9.73□□□□□ -0.85
PHGDH-217ENST00000641455 RABGAP1Q9Y3P9 1069 aa9.73□□□□□ -0.85
PHGDH-217ENST00000641455 DNAH12Q6ZR08 3092 aa9.73□□□□□ -0.85
PHGDH-217ENST00000641455 TCF20Q9UGU0 1960 aaKnown RBP9.72□□□□□ -0.85
PHGDH-217ENST00000641455 PQBP1O60828 265 aaKnown RBP9.72□□□□□ -0.85
PHGDH-217ENST00000641455 NPM3O75607 178 aaKnown RBP9.72□□□□□ -0.85
PHGDH-217ENST00000641455 LDHCP07864 332 aa9.72□□□□□ -0.85
PHGDH-217ENST00000641455 CLTBP09497 229 aa9.72□□□□□ -0.85
PHGDH-217ENST00000641455 CYBAP13498 195 aa9.72□□□□□ -0.85
PHGDH-217ENST00000641455 RFX5P48382 616 aaPredicted RBP9.72□□□□□ -0.85
PHGDH-217ENST00000641455 GSTO1P78417 241 aa9.72□□□□□ -0.85
PHGDH-217ENST00000641455 SNX17Q15036 470 aa9.72□□□□□ -0.85
PHGDH-217ENST00000641455 AKNAD1Q5T1N1 836 aa9.72□□□□□ -0.85
PHGDH-217ENST00000641455 USP17L2Q6R6M4 530 aa9.72□□□□□ -0.85
PHGDH-217ENST00000641455 ATG9AQ7Z3C6 839 aa9.72□□□□□ -0.85
PHGDH-217ENST00000641455 DPP9Q86TI2 863 aa9.72□□□□□ -0.85
PHGDH-217ENST00000641455 NECAB3Q96P71 396 aaPredicted RBP9.72□□□□□ -0.85
PHGDH-217ENST00000641455 NOL10Q9BSC4 688 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms