RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 CD248Q9HCU0 757 aa10.27□□□□□ -0.76
PAX6-259ENST00000639916 NIP7Q9Y221 180 aaKnown RBP eCLIP10.27□□□□□ -0.76
PAX6-259ENST00000639916 FAM169AQ9Y6X4 670 aa10.27□□□□□ -0.76
PAX6-259ENST00000639916 MYH3P11055 1940 aa10.27□□□□□ -0.77
PAX6-259ENST00000639916 EIF3JO75822 258 aaKnown RBP10.27□□□□□ -0.77
PAX6-259ENST00000639916 MYBL2P10244 700 aa10.27□□□□□ -0.77
PAX6-259ENST00000639916 VPS72Q15906 364 aa10.27□□□□□ -0.77
PAX6-259ENST00000639916 WASHC4Q2M389 1173 aa10.27□□□□□ -0.77
PAX6-259ENST00000639916 VGLL2Q8N8G2 317 aa10.27□□□□□ -0.77
PAX6-259ENST00000639916 OSBP2Q969R2 916 aa10.27□□□□□ -0.77
PAX6-259ENST00000639916 THOC1Q96FV9 657 aaKnown RBP10.27□□□□□ -0.77
PAX6-259ENST00000639916 FAM204AQ9H8W3 233 aa10.27□□□□□ -0.77
PAX6-259ENST00000639916 ODF2LQ9ULJ1 636 aa10.27□□□□□ -0.77
PAX6-259ENST00000639916 M0R2C6 588 aa10.26□□□□□ -0.77
PAX6-259ENST00000639916 TXLNAP40222 546 aa10.26□□□□□ -0.77
PAX6-259ENST00000639916 MRPL12P52815 198 aaKnown RBP10.26□□□□□ -0.77
PAX6-259ENST00000639916 PPP2R3AQ06190 1150 aa10.26□□□□□ -0.77
PAX6-259ENST00000639916 PARP10Q53GL7 1025 aa10.26□□□□□ -0.77
PAX6-259ENST00000639916 HELBQ8NG08 1087 aaPredicted RBP10.26□□□□□ -0.77
PAX6-259ENST00000639916 FAM71BQ8TC56 605 aa10.26□□□□□ -0.77
PAX6-259ENST00000639916 MYH14Q7Z406 1995 aaKnown RBP10.26□□□□□ -0.77
PAX6-259ENST00000639916 ZFYP08048 801 aaPredicted RBP10.26□□□□□ -0.77
PAX6-259ENST00000639916 RDXP35241 583 aaKnown RBP10.26□□□□□ -0.77
PAX6-259ENST00000639916 MCAMP43121 646 aa10.26□□□□□ -0.77
PAX6-259ENST00000639916 KCNQ4P56696 695 aa10.26□□□□□ -0.77
PAX6-259ENST00000639916 STK3Q13188 491 aa10.26□□□□□ -0.77
PAX6-259ENST00000639916 DHX8Q14562 1220 aaKnown RBP10.26□□□□□ -0.77
PAX6-259ENST00000639916 HNRNPLLQ8WVV9 542 aaKnown RBP10.26□□□□□ -0.77
PAX6-259ENST00000639916 SH3GL3Q99963 347 aa10.26□□□□□ -0.77
PAX6-259ENST00000639916 BCL9LQ86UU0 1499 aa10.26□□□□□ -0.77
PAX6-259ENST00000639916 GOLGB1Q14789 3259 aaKnown RBP10.26□□□□□ -0.77
PAX6-259ENST00000639916 SPEF2Q9C093 1822 aa10.25□□□□□ -0.77
PAX6-259ENST00000639916 CHUKO15111 745 aa10.25□□□□□ -0.77
PAX6-259ENST00000639916 NR1I2O75469 434 aa10.25□□□□□ -0.77
PAX6-259ENST00000639916 KRT85P78386 507 aa10.25□□□□□ -0.77
PAX6-259ENST00000639916 Q6ZUG5 572 aa10.25□□□□□ -0.77
PAX6-259ENST00000639916 STOX1Q6ZVD7 989 aa10.25□□□□□ -0.77
PAX6-259ENST00000639916 CCDC150Q8NCX0 1101 aa10.25□□□□□ -0.77
PAX6-259ENST00000639916 MPHOSPH8Q99549 860 aa10.25□□□□□ -0.77
PAX6-259ENST00000639916 SUGCTQ9HAC7 445 aa10.25□□□□□ -0.77
PAX6-259ENST00000639916 SEC31BQ9NQW1 1179 aa10.25□□□□□ -0.77
PAX6-259ENST00000639916 IMPACTQ9P2X3 320 aa10.25□□□□□ -0.77
PAX6-259ENST00000639916 MROH5Q6ZUA9 1318 aa10.25□□□□□ -0.77
PAX6-259ENST00000639916 ABCB7O75027 752 aa10.25□□□□□ -0.77
PAX6-259ENST00000639916 SFPQP23246 707 aaKnown RBP eCLIP10.25□□□□□ -0.77
PAX6-259ENST00000639916 INPP5BP32019 993 aa10.25□□□□□ -0.77
PAX6-259ENST00000639916 CCT5P48643 541 aa10.25□□□□□ -0.77
PAX6-259ENST00000639916 MAP3K9P80192 1104 aa10.25□□□□□ -0.77
PAX6-259ENST00000639916 WWC2Q6AWC2 1192 aa10.25□□□□□ -0.77
PAX6-259ENST00000639916 ILDR1Q86SU0 546 aaPredicted RBP10.25□□□□□ -0.77
PAX6-259ENST00000639916 GOLGA1Q92805 767 aa10.25□□□□□ -0.77
PAX6-259ENST00000639916 CCDC102AQ96A19 550 aa10.25□□□□□ -0.77
PAX6-259ENST00000639916 BAG1Q99933 345 aaPredicted RBP10.25□□□□□ -0.77
PAX6-259ENST00000639916 L1RE1Q9UN81 338 aa10.25□□□□□ -0.77
PAX6-259ENST00000639916 A0A0G2JLW4 131 aa10.24□□□□□ -0.77
PAX6-259ENST00000639916 AP1G2O75843 785 aa10.24□□□□□ -0.77
PAX6-259ENST00000639916 HMGB1P09429 215 aaKnown RBP10.24□□□□□ -0.77
PAX6-259ENST00000639916 ATP2B2Q01814 1243 aa10.24□□□□□ -0.77
PAX6-259ENST00000639916 PUM3Q15397 648 aaKnown RBP10.24□□□□□ -0.77
PAX6-259ENST00000639916 HSP90B2PQ58FF3 399 aa10.24□□□□□ -0.77
PAX6-259ENST00000639916 CCDC102BQ68D86 513 aa10.24□□□□□ -0.77
PAX6-259ENST00000639916 LINC00116Q8NCU8 138 aa10.24□□□□□ -0.77
PAX6-259ENST00000639916 ZNF512BQ96KM6 892 aaPredicted RBP10.24□□□□□ -0.77
PAX6-259ENST00000639916 LRRC2Q9BYS8 371 aa10.24□□□□□ -0.77
PAX6-259ENST00000639916 SPATS2LQ9NUQ6 558 aaKnown RBP10.24□□□□□ -0.77
PAX6-259ENST00000639916 ZNF652Q9Y2D9 606 aa10.24□□□□□ -0.77
PAX6-259ENST00000639916 MRFAP1Q9Y605 127 aa10.24□□□□□ -0.77
PAX6-259ENST00000639916 ABCC12Q96J65 1359 aa10.24□□□□□ -0.77
PAX6-259ENST00000639916 VPS37CA5D8V6 355 aaPredicted RBP10.24□□□□□ -0.77
PAX6-259ENST00000639916 BECN2A8MW95 431 aa10.24□□□□□ -0.77
PAX6-259ENST00000639916 TMCO5BA8MYB1 307 aa10.24□□□□□ -0.77
PAX6-259ENST00000639916 MYO1FO00160 1098 aa10.24□□□□□ -0.77
PAX6-259ENST00000639916 NTSR2O95665 410 aa10.24□□□□□ -0.77
PAX6-259ENST00000639916 PHKA1P46020 1223 aa10.24□□□□□ -0.77
PAX6-259ENST00000639916 RWDD2BP57060 319 aa10.24□□□□□ -0.77
PAX6-259ENST00000639916 CCT2P78371 535 aaKnown RBP10.24□□□□□ -0.77
PAX6-259ENST00000639916 CCDC152Q4G0S7 254 aa10.24□□□□□ -0.77
PAX6-259ENST00000639916 WLSQ5T9L3 541 aa10.24□□□□□ -0.77
PAX6-259ENST00000639916 LARP1BQ659C4 914 aaKnown RBP10.24□□□□□ -0.77
PAX6-259ENST00000639916 DHX32Q7L7V1 743 aaKnown RBP10.24□□□□□ -0.77
PAX6-259ENST00000639916 PTF1AQ7RTS3 328 aa10.24□□□□□ -0.77
PAX6-259ENST00000639916 IQCA1Q86XH1 822 aa10.24□□□□□ -0.77
PAX6-259ENST00000639916 DHX40Q8IX18 779 aaKnown RBP10.24□□□□□ -0.77
PAX6-259ENST00000639916 ARMC2Q8NEN0 867 aa10.24□□□□□ -0.77
PAX6-259ENST00000639916 LPIN2Q92539 896 aa10.24□□□□□ -0.77
PAX6-259ENST00000639916 PUS7LQ9H0K6 701 aaKnown RBP10.24□□□□□ -0.77
PAX6-259ENST00000639916 CPSF2Q9P2I0 782 aaKnown RBP10.24□□□□□ -0.77
PAX6-259ENST00000639916 GOLGA6L4A6NEF3 574 aa10.23□□□□□ -0.77
PAX6-259ENST00000639916 E7EWF7 191 aa10.23□□□□□ -0.77
PAX6-259ENST00000639916 EBAG9O00559 213 aa10.23□□□□□ -0.77
PAX6-259ENST00000639916 CCP110O43303 1012 aa10.23□□□□□ -0.77
PAX6-259ENST00000639916 USP5P45974 858 aa10.23□□□□□ -0.77
PAX6-259ENST00000639916 FAM173BQ6P4H8 233 aa10.23□□□□□ -0.77
PAX6-259ENST00000639916 FNBP4Q8N3X1 1017 aaPredicted RBP10.23□□□□□ -0.77
PAX6-259ENST00000639916 APPBP2Q92624 585 aa10.23□□□□□ -0.77
PAX6-259ENST00000639916 BRF1Q92994 677 aa10.23□□□□□ -0.77
PAX6-259ENST00000639916 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.23□□□□□ -0.77
PAX6-259ENST00000639916 ACBD3Q9H3P7 528 aa10.23□□□□□ -0.77
PAX6-259ENST00000639916 USP21Q9UK80 565 aa10.23□□□□□ -0.77
PAX6-259ENST00000639916 CAPN7Q9Y6W3 813 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms