RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 MBD4O95243 580 aa21.35■■□□□ 1.01
PTPN11-207ENST00000639857 PRMT2P55345 433 aa21.35■■□□□ 1.01
PTPN11-207ENST00000639857 PABPC4Q13310 644 aaKnown RBP eCLIP21.35■■□□□ 1.01
PTPN11-207ENST00000639857 LRRFIP1Q32MZ4 808 aaKnown RBP21.35■■□□□ 1.01
PTPN11-207ENST00000639857 CCDC84Q86UT8 332 aaPredicted RBP21.35■■□□□ 1.01
PTPN11-207ENST00000639857 MCM9Q9NXL9 1143 aa21.35■■□□□ 1.01
PTPN11-207ENST00000639857 ZBTB47Q9UFB7 747 aaPredicted RBP21.35■■□□□ 1.01
PTPN11-207ENST00000639857 C19orf81C9J6K1 198 aa21.34■■□□□ 1.01
PTPN11-207ENST00000639857 GLRX3O76003 335 aaKnown RBP21.34■■□□□ 1.01
PTPN11-207ENST00000639857 POLR3DP05423 398 aaPredicted RBP21.34■■□□□ 1.01
PTPN11-207ENST00000639857 ZFYP08048 801 aaPredicted RBP21.34■■□□□ 1.01
PTPN11-207ENST00000639857 BCRP11274 1271 aa21.34■■□□□ 1.01
PTPN11-207ENST00000639857 GABPAQ06546 454 aa21.34■■□□□ 1.01
PTPN11-207ENST00000639857 ARMT1Q9H993 441 aa21.34■■□□□ 1.01
PTPN11-207ENST00000639857 BACE1P56817 501 aa21.33■■□□□ 1.01
PTPN11-207ENST00000639857 SLC4A8Q2Y0W8 1093 aa21.33■■□□□ 1.01
PTPN11-207ENST00000639857 SDR42E1Q8WUS8 393 aa21.33■■□□□ 1.01
PTPN11-207ENST00000639857 DDRGK1Q96HY6 314 aa21.33■■□□□ 1.01
PTPN11-207ENST00000639857 CPA4Q9UI42 421 aa21.33■■□□□ 1.01
PTPN11-207ENST00000639857 GDF11O95390 407 aa21.32■■□□□ 1
PTPN11-207ENST00000639857 CYP2C8P10632 490 aa21.32■■□□□ 1
PTPN11-207ENST00000639857 MX1P20591 662 aa21.32■■□□□ 1
PTPN11-207ENST00000639857 PLCD1P51178 756 aa21.32■■□□□ 1
PTPN11-207ENST00000639857 HMGCS2P54868 508 aa21.32■■□□□ 1
PTPN11-207ENST00000639857 CAP1Q01518 475 aa21.32■■□□□ 1
PTPN11-207ENST00000639857 AMOTL1Q8IY63 956 aa21.32■■□□□ 1
PTPN11-207ENST00000639857 PI4K2BQ8TCG2 481 aa21.32■■□□□ 1
PTPN11-207ENST00000639857 SMCR8Q8TEV9 937 aaPredicted RBP21.32■■□□□ 1
PTPN11-207ENST00000639857 SWAP70Q9UH65 585 aa21.32■■□□□ 1
PTPN11-207ENST00000639857 SALL3Q9BXA9 1300 aa21.31■■□□□ 1
PTPN11-207ENST00000639857 USP17L10C9JJH3 530 aa21.31■■□□□ 1
PTPN11-207ENST00000639857 SHMT1P34896 483 aa21.31■■□□□ 1
PTPN11-207ENST00000639857 JAG1P78504 1218 aa21.31■■□□□ 1
PTPN11-207ENST00000639857 MTMR2Q13614 643 aa21.31■■□□□ 1
PTPN11-207ENST00000639857 CERKLQ49MI3 558 aaPredicted RBP21.31■■□□□ 1
PTPN11-207ENST00000639857 TREML2Q5T2D2 321 aa21.31■■□□□ 1
PTPN11-207ENST00000639857 APPBP2Q92624 585 aa21.31■■□□□ 1
PTPN11-207ENST00000639857 TMOD4Q9NZQ9 345 aa21.31■■□□□ 1
PTPN11-207ENST00000639857 GH2P01242 217 aa21.3■■□□□ 1
PTPN11-207ENST00000639857 ABCB5Q2M3G0 1257 aa21.3■■□□□ 1
PTPN11-207ENST00000639857 TSHZ3Q63HK5 1081 aa21.3■■□□□ 1
PTPN11-207ENST00000639857 ARMC5Q96C12 935 aa21.3■■□□□ 1
PTPN11-207ENST00000639857 PUS7LQ9H0K6 701 aaKnown RBP21.3■■□□□ 1
PTPN11-207ENST00000639857 CABP5Q9NP86 173 aa21.3■■□□□ 1
PTPN11-207ENST00000639857 RNF113AO15541 343 aaKnown RBP21.29■■□□□ 1
PTPN11-207ENST00000639857 OSBPP22059 807 aa21.29■■□□□ 1
PTPN11-207ENST00000639857 HOXD10P28358 340 aa21.29■■□□□ 1
PTPN11-207ENST00000639857 HOXA7P31268 230 aaPredicted RBP21.29■■□□□ 1
PTPN11-207ENST00000639857 GCLCP48506 637 aaPredicted RBP21.29■■□□□ 1
PTPN11-207ENST00000639857 SLFNL1Q499Z3 407 aa21.29■■□□□ 1
PTPN11-207ENST00000639857 ANKRD45Q5TZF3 282 aa21.29■■□□□ 1
PTPN11-207ENST00000639857 ARHGAP39Q9C0H5 1083 aa21.29■■□□□ 1
PTPN11-207ENST00000639857 RWDD1Q9H446 243 aaPredicted RBP21.29■■□□□ 1
PTPN11-207ENST00000639857 PRKAB2O43741 272 aa21.28■■□□□ 1
PTPN11-207ENST00000639857 PSMC4P43686 418 aa21.28■■□□□ 1
PTPN11-207ENST00000639857 FCGRTP55899 365 aa21.28■■□□□ 1
PTPN11-207ENST00000639857 FAM110CQ1W6H9 321 aa21.28■■□□□ 1
PTPN11-207ENST00000639857 GIMAP6Q6P9H5 292 aa21.28■■□□□ 1
PTPN11-207ENST00000639857 C12orf42Q96LP6 360 aa21.28■■□□□ 1
PTPN11-207ENST00000639857 SLC4A4Q9Y6R1 1079 aa21.28■■□□□ 1
PTPN11-207ENST00000639857 CHGBP05060 677 aa21.27■■□□□ 1
PTPN11-207ENST00000639857 GNAT2P19087 354 aa21.27■■□□□ 1
PTPN11-207ENST00000639857 USP14P54578 494 aa21.27■■□□□ 1
PTPN11-207ENST00000639857 SHROOM1Q2M3G4 852 aaPredicted RBP21.27■■□□□ 1
PTPN11-207ENST00000639857 C12orf60Q5U649 245 aa21.27■■□□□ 1
PTPN11-207ENST00000639857 USP17L2Q6R6M4 530 aa21.27■■□□□ 1
PTPN11-207ENST00000639857 SMC5Q8IY18 1101 aa21.27■■□□□ 1
PTPN11-207ENST00000639857 OTUD7AQ8TE49 926 aaPredicted RBP21.27■■□□□ 1
PTPN11-207ENST00000639857 TRIM47Q96LD4 638 aa21.27■■□□□ 1
PTPN11-207ENST00000639857 STRBPQ96SI9 672 aaKnown RBP21.27■■□□□ 1
PTPN11-207ENST00000639857 ARPP21Q9UBL0 812 aaPredicted RBP21.27■■□□□ 1
PTPN11-207ENST00000639857 STAP2Q9UGK3 403 aa21.27■■□□□ 1
PTPN11-207ENST00000639857 SRRDQ9UH36 339 aa21.27■■□□□ 1
PTPN11-207ENST00000639857 CENPFP49454 3210 aa21.26■□□□□ 0.99
PTPN11-207ENST00000639857 SOX10P56693 466 aa21.26■□□□□ 0.99
PTPN11-207ENST00000639857 MLLT1Q03111 559 aaPredicted RBP21.26■□□□□ 0.99
PTPN11-207ENST00000639857 NBPF11Q86T75 865 aa21.26■□□□□ 0.99
PTPN11-207ENST00000639857 TICAM2Q86XR7 235 aa21.26■□□□□ 0.99
PTPN11-207ENST00000639857 KIAA1683Q9H0B3 1180 aa21.26■□□□□ 0.99
PTPN11-207ENST00000639857 ASCC2Q9H1I8 757 aaPredicted RBP21.26■□□□□ 0.99
PTPN11-207ENST00000639857 PTCH2Q9Y6C5 1203 aa21.26■□□□□ 0.99
PTPN11-207ENST00000639857 FMNL1O95466 1100 aaPredicted RBP21.25■□□□□ 0.99
PTPN11-207ENST00000639857 CTGFP29279 349 aa21.25■□□□□ 0.99
PTPN11-207ENST00000639857 IRX3P78415 501 aaPredicted RBP21.25■□□□□ 0.99
PTPN11-207ENST00000639857 RAB3GAP1Q15042 981 aa21.25■□□□□ 0.99
PTPN11-207ENST00000639857 SLC9C1Q4G0N8 1177 aa21.25■□□□□ 0.99
PTPN11-207ENST00000639857 TMEM179Q6ZVK1 233 aa21.25■□□□□ 0.99
PTPN11-207ENST00000639857 GTF3C2Q8WUA4 911 aaPredicted RBP21.25■□□□□ 0.99
PTPN11-207ENST00000639857 OSBP2Q969R2 916 aa21.25■□□□□ 0.99
PTPN11-207ENST00000639857 CCDC17Q96LX7 622 aa21.25■□□□□ 0.99
PTPN11-207ENST00000639857 FEZ1Q99689 392 aa21.25■□□□□ 0.99
PTPN11-207ENST00000639857 GREB1LQ9C091 1923 aaPredicted RBP21.25■□□□□ 0.99
PTPN11-207ENST00000639857 DOCK3Q8IZD9 2030 aa21.24■□□□□ 0.99
PTPN11-207ENST00000639857 USP17L12C9JPN9 530 aa21.24■□□□□ 0.99
PTPN11-207ENST00000639857 USP17L21D6R901 530 aa21.24■□□□□ 0.99
PTPN11-207ENST00000639857 CYP2D6P10635 497 aa21.24■□□□□ 0.99
PTPN11-207ENST00000639857 SBK1Q52WX2 424 aa21.24■□□□□ 0.99
PTPN11-207ENST00000639857 C16orf86Q6ZW13 317 aa21.24■□□□□ 0.99
PTPN11-207ENST00000639857 EXOC6Q8TAG9 804 aa21.24■□□□□ 0.99
PTPN11-207ENST00000639857 FSD1Q9BTV5 496 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms