RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 BACE1P56817 501 aa20.57■□□□□ 0.88
SMN2-216ENST00000638794 UBE2Q1Q7Z7E8 422 aa20.57■□□□□ 0.88
SMN2-216ENST00000638794 AACSQ86V21 672 aa20.57■□□□□ 0.88
SMN2-216ENST00000638794 ERC1Q8IUD2 1116 aa20.57■□□□□ 0.88
SMN2-216ENST00000638794 MAGEB6Q8N7X4 407 aa20.57■□□□□ 0.88
SMN2-216ENST00000638794 U2AF1L4Q8WU68 220 aaKnown RBP20.57■□□□□ 0.88
SMN2-216ENST00000638794 ANTXR1Q9H6X2 564 aa20.57■□□□□ 0.88
SMN2-216ENST00000638794 TAOK2Q9UL54 1235 aa20.57■□□□□ 0.88
SMN2-216ENST00000638794 H0YGN5 161 aa20.56■□□□□ 0.88
SMN2-216ENST00000638794 ZBTB21Q9ULJ3 1066 aa20.56■□□□□ 0.88
SMN2-216ENST00000638794 RANBP2P49792 3224 aaKnown RBP20.55■□□□□ 0.88
SMN2-216ENST00000638794 IL1RAPL2Q9NP60 686 aa20.55■□□□□ 0.88
SMN2-216ENST00000638794 GINM1Q9NU53 330 aa20.55■□□□□ 0.88
SMN2-216ENST00000638794 TMOD4Q9NZQ9 345 aa20.55■□□□□ 0.88
SMN2-216ENST00000638794 PLXNB2O15031 1838 aa20.55■□□□□ 0.88
SMN2-216ENST00000638794 DDX60LQ5H9U9 1706 aaKnown RBP20.54■□□□□ 0.88
SMN2-216ENST00000638794 USP17L10C9JJH3 530 aa20.54■□□□□ 0.88
SMN2-216ENST00000638794 SGPL1O95470 568 aa20.54■□□□□ 0.88
SMN2-216ENST00000638794 USP5P45974 858 aa20.54■□□□□ 0.88
SMN2-216ENST00000638794 IRX3P78415 501 aaPredicted RBP20.54■□□□□ 0.88
SMN2-216ENST00000638794 MAP3K12Q12852 859 aa20.54■□□□□ 0.88
SMN2-216ENST00000638794 CERS3Q8IU89 383 aa20.54■□□□□ 0.88
SMN2-216ENST00000638794 COLQQ9Y215 455 aaPredicted RBP20.54■□□□□ 0.88
SMN2-216ENST00000638794 C19orf81C9J6K1 198 aa20.53■□□□□ 0.88
SMN2-216ENST00000638794 FARP2O94887 1054 aaPredicted RBP20.53■□□□□ 0.88
SMN2-216ENST00000638794 HOXA7P31268 230 aaPredicted RBP20.53■□□□□ 0.88
SMN2-216ENST00000638794 RHPN1Q8TCX5 695 aa20.53■□□□□ 0.88
SMN2-216ENST00000638794 DPF3Q92784 378 aa20.53■□□□□ 0.88
SMN2-216ENST00000638794 MORF4L1Q9UBU8 362 aa20.53■□□□□ 0.88
SMN2-216ENST00000638794 NAV1Q8NEY1 1877 aa20.53■□□□□ 0.88
SMN2-216ENST00000638794 TRIOBPQ9H2D6 2365 aa20.53■□□□□ 0.88
SMN2-216ENST00000638794 MS4A1P11836 297 aa20.52■□□□□ 0.88
SMN2-216ENST00000638794 HSP90AB4PQ58FF6 505 aa20.52■□□□□ 0.88
SMN2-216ENST00000638794 DEFB118Q96PH6 123 aa20.52■□□□□ 0.88
SMN2-216ENST00000638794 P2RX7Q99572 595 aaKnown RBP20.52■□□□□ 0.88
SMN2-216ENST00000638794 PAK6Q9NQU5 681 aaPredicted RBP20.52■□□□□ 0.88
SMN2-216ENST00000638794 PEX10O60683 326 aa20.51■□□□□ 0.87
SMN2-216ENST00000638794 GH2P01242 217 aa20.51■□□□□ 0.87
SMN2-216ENST00000638794 HERVK_113P62684 666 aa20.51■□□□□ 0.87
SMN2-216ENST00000638794 TMED8Q6PL24 325 aaPredicted RBP20.51■□□□□ 0.87
SMN2-216ENST00000638794 RIOK1Q9BRS2 568 aaKnown RBP20.51■□□□□ 0.87
SMN2-216ENST00000638794 HTATIP2Q9BUP3 242 aa20.51■□□□□ 0.87
SMN2-216ENST00000638794 TXNRD2Q9NNW7 524 aa20.51■□□□□ 0.87
SMN2-216ENST00000638794 SERPINB13Q9UIV8 391 aa20.51■□□□□ 0.87
SMN2-216ENST00000638794 GJD2Q9UKL4 321 aa20.51■□□□□ 0.87
SMN2-216ENST00000638794 SZT2Q5T011 3432 aa20.5■□□□□ 0.87
SMN2-216ENST00000638794 APBB1O00213 710 aa20.5■□□□□ 0.87
SMN2-216ENST00000638794 TATDN1Q6P1N9 297 aa20.5■□□□□ 0.87
SMN2-216ENST00000638794 EHD4Q9H223 541 aa20.5■□□□□ 0.87
SMN2-216ENST00000638794 EMILIN3Q9NT22 766 aa20.5■□□□□ 0.87
SMN2-216ENST00000638794 TFRCP02786 760 aaKnown RBP20.49■□□□□ 0.87
SMN2-216ENST00000638794 HMGCRP04035 888 aa20.49■□□□□ 0.87
SMN2-216ENST00000638794 FXR1P51114 621 aaKnown RBP eCLIP20.49■□□□□ 0.87
SMN2-216ENST00000638794 USP17L2Q6R6M4 530 aa20.49■□□□□ 0.87
SMN2-216ENST00000638794 SIRT2Q8IXJ6 389 aa20.49■□□□□ 0.87
SMN2-216ENST00000638794 RPAP2Q8IXW5 612 aaPredicted RBP20.49■□□□□ 0.87
SMN2-216ENST00000638794 CLASRPQ8N2M8 674 aaKnown RBP20.49■□□□□ 0.87
SMN2-216ENST00000638794 KIF1BPQ96EK5 621 aa20.49■□□□□ 0.87
SMN2-216ENST00000638794 DDX19BQ9UMR2 479 aa20.49■□□□□ 0.87
SMN2-216ENST00000638794 COG6Q9Y2V7 657 aa20.49■□□□□ 0.87
SMN2-216ENST00000638794 MAGEB6P1A0A0J9YX57 407 aa20.48■□□□□ 0.87
SMN2-216ENST00000638794 PDE6AP16499 860 aa20.48■□□□□ 0.87
SMN2-216ENST00000638794 TTF1Q15361 905 aaPredicted RBP20.48■□□□□ 0.87
SMN2-216ENST00000638794 TTC6Q86TZ1 520 aa20.48■□□□□ 0.87
SMN2-216ENST00000638794 GPRC5AQ8NFJ5 357 aa20.48■□□□□ 0.87
SMN2-216ENST00000638794 CRISPLD2Q9H0B8 497 aa20.48■□□□□ 0.87
SMN2-216ENST00000638794 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.48■□□□□ 0.87
SMN2-216ENST00000638794 ZBTB40Q9NUA8 1239 aa20.48■□□□□ 0.87
SMN2-216ENST00000638794 RBPJLQ9UBG7 517 aa20.48■□□□□ 0.87
SMN2-216ENST00000638794 HMMRO75330 724 aa20.47■□□□□ 0.87
SMN2-216ENST00000638794 PLCD1P51178 756 aa20.47■□□□□ 0.87
SMN2-216ENST00000638794 TRIM32Q13049 653 aa20.47■□□□□ 0.87
SMN2-216ENST00000638794 RAB3GAP1Q15042 981 aa20.47■□□□□ 0.87
SMN2-216ENST00000638794 CERKLQ49MI3 558 aaPredicted RBP20.47■□□□□ 0.87
SMN2-216ENST00000638794 SLC9C2Q5TAH2 1124 aa20.47■□□□□ 0.87
SMN2-216ENST00000638794 CHRDL2Q6WN34 429 aa20.47■□□□□ 0.87
SMN2-216ENST00000638794 DNAJC2Q99543 621 aaKnown RBP20.47■□□□□ 0.87
SMN2-216ENST00000638794 BCL11AQ9H165 835 aa20.47■□□□□ 0.87
SMN2-216ENST00000638794 ALPK3Q96L96 1907 aa20.47■□□□□ 0.87
SMN2-216ENST00000638794 GOLIM4O00461 696 aa20.46■□□□□ 0.87
SMN2-216ENST00000638794 IFIT2P09913 472 aaKnown RBP20.46■□□□□ 0.87
SMN2-216ENST00000638794 CAPN2P17655 700 aa20.46■□□□□ 0.87
SMN2-216ENST00000638794 CYP2B6P20813 491 aa20.46■□□□□ 0.87
SMN2-216ENST00000638794 SHMT1P34896 483 aa20.46■□□□□ 0.87
SMN2-216ENST00000638794 ERVK-9P63128 1117 aa20.46■□□□□ 0.87
SMN2-216ENST00000638794 ERVK-24P63145 666 aa20.46■□□□□ 0.87
SMN2-216ENST00000638794 ZYXQ15942 572 aaKnown RBP20.46■□□□□ 0.87
SMN2-216ENST00000638794 ABCB5Q2M3G0 1257 aa20.46■□□□□ 0.87
SMN2-216ENST00000638794 POTEEQ6S8J3 1075 aa20.46■□□□□ 0.87
SMN2-216ENST00000638794 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.46■□□□□ 0.87
SMN2-216ENST00000638794 TRIB2Q92519 343 aa20.46■□□□□ 0.87
SMN2-216ENST00000638794 C12orf42Q96LP6 360 aa20.46■□□□□ 0.87
SMN2-216ENST00000638794 FEZ1Q99689 392 aa20.46■□□□□ 0.87
SMN2-216ENST00000638794 PAGR1Q9BTK6 254 aa20.46■□□□□ 0.87
SMN2-216ENST00000638794 ZNF532Q9HCE3 1301 aa20.46■□□□□ 0.87
SMN2-216ENST00000638794 Q3C1V9 767 aa20.45■□□□□ 0.86
SMN2-216ENST00000638794 GTF3C2Q8WUA4 911 aaPredicted RBP20.45■□□□□ 0.86
SMN2-216ENST00000638794 PORCNQ9H237 461 aa20.45■□□□□ 0.86
SMN2-216ENST00000638794 RPTORQ8N122 1335 aa20.45■□□□□ 0.86
SMN2-216ENST00000638794 TCRBV5S4A2TA0A5A2 114 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms